##FastQC 0.11.5 >>Basic Statistics pass #Measure Value Filename SRR1545999_1.fastq.gz File type Conventional base calls Encoding Illumina 1.5 Total Sequences 882130 Sequences flagged as poor quality 0 Sequence length 50 %GC 40 >>END_MODULE >>Per base sequence quality pass #Base Mean Median Lower Quartile Upper Quartile 10th Percentile 90th Percentile 1 28.967508190402775 31.0 28.0 33.0 23.0 33.0 2 28.718689989003888 31.0 28.0 33.0 16.0 33.0 3 28.19484429732579 31.0 27.0 33.0 16.0 34.0 4 31.925436160203144 35.0 32.0 35.0 25.0 37.0 5 33.639215308401255 35.0 33.0 35.0 28.0 37.0 6 33.54004965254554 35.0 33.0 37.0 28.0 37.0 7 34.20813145454751 35.0 33.0 37.0 30.0 37.0 8 34.712179610714976 35.0 35.0 37.0 32.0 37.0 9 36.62864883860655 39.0 37.0 39.0 32.0 39.0 10 36.398402729756384 39.0 35.0 39.0 32.0 39.0 11 36.43290671442985 39.0 35.0 39.0 32.0 39.0 12 35.385660843639826 37.0 35.0 39.0 30.0 39.0 13 35.329144230442225 37.0 34.0 39.0 29.0 39.0 14 36.18845408273157 38.0 35.0 40.0 30.0 41.0 15 36.70101685692585 38.0 35.0 40.0 31.0 41.0 16 36.368801650550374 38.0 34.0 40.0 31.0 41.0 17 35.95702560847041 38.0 34.0 40.0 30.0 41.0 18 35.53211431421673 37.0 34.0 39.0 29.0 40.0 19 34.93011234171834 37.0 33.0 39.0 27.0 40.0 20 35.34734449570925 35.0 34.0 39.0 30.0 40.0 21 35.467966172786326 35.0 34.0 39.0 30.0 40.0 22 35.775753006926415 36.0 34.0 40.0 31.0 41.0 23 36.093199415052204 36.0 35.0 40.0 32.0 41.0 24 35.697833652636234 35.0 35.0 40.0 31.0 41.0 25 35.34847924909027 35.0 34.0 39.0 30.0 41.0 26 35.434441635586595 35.0 34.0 40.0 30.0 41.0 27 35.781194381780466 36.0 35.0 40.0 31.0 41.0 28 35.74270232278689 36.0 35.0 40.0 31.0 41.0 29 35.869189348508726 36.0 35.0 40.0 31.0 41.0 30 35.53665332774081 36.0 35.0 40.0 30.0 41.0 31 34.81176017140331 35.0 34.0 40.0 29.0 41.0 32 34.6647421581853 35.0 34.0 40.0 26.0 41.0 33 34.21718340834117 36.0 34.0 40.0 23.0 41.0 34 33.65211023318558 36.0 33.0 40.0 18.0 41.0 35 33.24542301021391 36.0 33.0 40.0 15.0 41.0 36 32.82162039608674 35.0 33.0 40.0 13.0 41.0 37 32.69818167390294 35.0 33.0 40.0 11.0 41.0 38 32.56339995238797 35.0 32.0 40.0 10.0 41.0 39 32.331465883713285 35.0 32.0 40.0 10.0 41.0 40 32.19733599356104 35.0 31.0 40.0 10.0 40.0 41 31.885066826884927 35.0 31.0 39.0 10.0 40.0 42 32.06805119426842 35.0 31.0 39.0 10.0 40.0 43 31.867658961831022 35.0 31.0 39.0 10.0 40.0 44 31.62321539909084 35.0 31.0 39.0 10.0 40.0 45 31.586811467697505 35.0 30.0 39.0 10.0 40.0 46 31.41075465067507 35.0 30.0 39.0 9.0 40.0 47 31.427135456225272 35.0 30.0 39.0 10.0 40.0 48 31.43560813032093 35.0 31.0 39.0 9.0 40.0 49 31.502832915783387 35.0 31.0 39.0 9.0 40.0 50 31.58156280820287 35.0 31.0 39.0 9.0 40.0 >>END_MODULE >>Per sequence quality scores pass #Quality Count 9 1.0 10 2.0 11 1.0 12 4.0 13 16.0 14 24.0 15 104.0 16 249.0 17 578.0 18 1200.0 19 2085.0 20 3001.0 21 4623.0 22 6504.0 23 9136.0 24 13364.0 25 20736.0 26 29654.0 27 33252.0 28 29781.0 29 27129.0 30 27868.0 31 33192.0 32 43099.0 33 66399.0 34 106232.0 35 75882.0 36 76834.0 37 111184.0 38 130059.0 39 29937.0 >>END_MODULE >>Per base sequence content fail #Base G A T C 1 26.654234636618185 21.069116796844003 26.471268407150873 25.805380159386935 2 40.581660299502346 20.262999784612244 27.591511455227685 11.563828460657726 3 26.599027354244843 18.52822146395656 42.62194914581751 12.250802035981092 4 23.46116785507805 23.682337070499813 39.87088070919253 12.985614365229614 5 19.437271150510696 28.221010508655187 39.49678618797683 12.844932152857288 6 17.555122260891252 35.83893530432022 37.20834797592192 9.397594458866607 7 72.36756487139083 4.930905875551223 20.38293675535352 2.31859249770442 8 73.57838413839231 3.830727897248705 19.768968292655277 2.821919671703717 9 69.87178760500153 5.375511545917268 21.0075612438076 3.7451396052735992 10 40.40141475746205 25.15502250235226 25.298425402151608 9.145137338034075 11 36.337387913346106 18.612449412218155 33.96868942219401 11.081473252241732 12 33.09806944554657 19.835965220545724 35.01263986033805 12.053325473569656 13 18.76242730663281 33.87403217212883 35.06535317923662 12.298187342001746 14 13.39734506251913 35.83031979413465 37.449015451237344 13.323319692108873 15 12.964755761622438 21.084307301644884 53.314704181923304 12.636232754809381 16 14.413068368607801 18.720143289537823 50.524299139582595 16.342489202271775 17 15.063426025642478 18.319748789860903 38.715495448516656 27.901329735979957 18 18.379603913255416 20.788205820003856 42.88506229240588 17.947127974334848 19 23.154523709657308 22.633738791334608 36.494620974232824 17.71711652477526 20 25.995714917302436 21.14654302653804 36.25667418634442 16.601067869815108 21 19.4931586047408 25.269064650334983 37.5339235713557 17.703853173568522 22 19.019872354414883 22.169181413170396 36.701279856710464 22.10966637570426 23 16.498475281421104 26.704794077970366 36.02598256492807 20.770748075680455 24 16.99171323954519 21.15606543253262 46.05738383231496 15.794837495607222 25 15.01139287860066 23.01191434369084 43.91144162425039 18.065251153458107 26 14.78387539251584 29.35927811093603 38.21137474068448 17.64547175586365 27 15.42720460703071 29.17619851949259 38.7558523120175 16.640744561459194 28 13.547322956933785 25.253760783557976 45.627515218845296 15.571401040662941 29 14.508632514481992 21.824107557842947 44.947230000113365 18.720029927561697 30 16.635529910557402 26.658769115663222 40.366499268815254 16.339201704964122 31 23.87720630746035 24.554657476789135 35.25886207248365 16.309274143266865 32 25.44488907530636 23.843651162527067 35.33980252343759 15.371657238728986 33 22.93460147597293 26.079035969755026 33.955652794939525 17.030709759332524 34 18.344461700656367 25.510298935531043 35.53387822656525 20.611361137247343 35 18.398988811172956 25.994694659517304 36.26370262886422 19.342613900445514 36 26.30496638817408 24.74453878680013 31.97204493668734 16.978449888338453 37 19.10149297722558 30.489270288959673 33.357781732851166 17.05145500096358 38 18.867400496525455 30.382029859544513 31.06786981510662 19.682699828823417 39 19.906249645743827 29.15738043145568 32.05638624692506 18.87998367587544 40 22.191740446419463 25.471189053767585 31.33222994343237 21.00484055638058 41 17.6544273519776 24.993821772301132 31.774455012299775 25.57729586342149 42 21.076598687268316 25.09471393105325 29.758312266899438 24.070375114779 43 21.26171879428202 25.805493521363065 30.10508655186877 22.82770113248614 44 19.09922573770306 28.673438155373926 31.161280083434413 21.066056023488603 45 16.653101016856926 33.648441839638146 28.425968961490938 21.272488182013987 46 20.957228526407672 30.159727024361487 29.844467368755172 19.038577080475665 47 19.90420913017356 26.294310362418237 31.401607472821468 22.39987303458674 48 20.993164272839604 24.347431784430867 33.15735775906046 21.502046183669073 49 20.131386530329998 23.5168285853559 34.69919399634974 21.652590887964358 50 18.82386949769308 29.588042578758234 31.37734800993051 20.210739913618177 >>END_MODULE >>Per sequence GC content fail #GC Content Count 0 357.0 1 573.5 2 790.0 3 14213.0 4 27636.0 5 20233.5 6 12831.0 7 13153.0 8 13475.0 9 14385.0 10 15295.0 11 15254.5 12 15214.0 13 14529.5 14 13845.0 15 13047.0 16 12249.0 17 11434.0 18 10619.0 19 9793.0 20 8967.0 21 8482.0 22 7997.0 23 7436.0 24 6875.0 25 7208.5 26 7542.0 27 7824.5 28 8107.0 29 9598.5 30 11090.0 31 12891.5 32 14693.0 33 17423.0 34 20153.0 35 22437.0 36 24721.0 37 27764.0 38 30807.0 39 38247.5 40 45688.0 41 57257.0 42 68826.0 43 79876.0 44 90926.0 45 89433.0 46 87940.0 47 79610.5 48 71281.0 49 65680.5 50 60080.0 51 54491.5 52 48903.0 53 44075.0 54 39247.0 55 34181.0 56 29115.0 57 25986.5 58 22858.0 59 20150.0 60 17442.0 61 15185.0 62 12928.0 63 10784.0 64 8640.0 65 6919.0 66 5198.0 67 4387.0 68 3576.0 69 2898.5 70 2221.0 71 1954.0 72 1687.0 73 1337.5 74 988.0 75 787.0 76 586.0 77 465.5 78 345.0 79 263.5 80 182.0 81 146.5 82 111.0 83 76.5 84 42.0 85 37.0 86 32.0 87 22.0 88 12.0 89 8.5 90 5.0 91 4.5 92 4.0 93 3.0 94 2.0 95 1.0 96 0.0 97 1.0 98 2.0 99 1.0 100 0.0 >>END_MODULE >>Per base N content pass #Base N-Count 1 0.0 2 0.0 3 0.0 4 0.0 5 0.0 6 0.0 7 0.0 8 0.0 9 0.0 10 0.0 11 0.0 12 0.0 13 0.0 14 0.0 15 0.0 16 0.0 17 0.0 18 0.0 19 0.0 20 0.0 21 0.0 22 0.0 23 0.0 24 0.0 25 0.0 26 0.0 27 0.0 28 0.0 29 0.0 30 0.0 31 0.0 32 0.0 33 0.0 34 0.0 35 0.0 36 0.0 37 0.0 38 0.0 39 0.0 40 0.0 41 0.0 42 0.0 43 0.0 44 0.0 45 0.0 46 0.0 47 0.0 48 0.0 49 0.0 50 0.0 >>END_MODULE >>Sequence Length Distribution pass #Length Count 50 882130.0 >>END_MODULE >>Sequence Duplication Levels fail #Total Deduplicated Percentage 31.01195299789028 #Duplication Level Percentage of deduplicated Percentage of total 1 76.8545659359919 23.834101864802403 2 7.35505680679848 4.561893519784948 3 3.2638825954372765 3.036581209209989 4 2.0999400219232873 2.6049296503309467 5 1.4978924482110059 2.3226285099907256 6 1.1069488097691331 2.0597186675778567 7 0.8618903015795107 1.8710231065344887 8 0.6518880695146222 1.6173057737338312 9 0.5507924414852121 1.5373034376239367 >10 4.855330135093962 32.38512687639065 >50 0.7877477445836321 16.66352582157421 >100 0.11184984126999747 4.781400724135722 >500 3.691413903300231E-4 0.05826927882263687 >1k 0.0014765655613200924 0.5992920916237799 >5k 0.0 0.0 >10k+ 3.691413903300231E-4 2.0668994678638675 >>END_MODULE >>Overrepresented sequences fail #Sequence Count Percentage Possible Source CGTTTTTTTTTTTTTTTTTTTTTTTTTTTTTTTTTTTTTTTTTTTTTTTT 18055 2.046750478954349 No Hit GAATGATACCTGTCTCTTATACACATCTGACGCGATAAGTGTCGTATGCC 1509 0.17106322197408547 No Hit GAATCTGTCTCTTATACACATCTGACGCGATAAGTGTCGTATGCCGTCTT 1475 0.16720891478580255 No Hit GACCAGAAAAATGGTCCTGCCAAGCGGCTACAGTGTTCTTCTTTCAGATA 1167 0.13229342613900447 No Hit GAATGATACGGCTGTCTCTTATACACATCTGACGCGATAAGTGTCGTATG 1084 0.12288438212054913 No Hit >>END_MODULE >>Adapter Content warn #Position Illumina Universal Adapter Illumina Small RNA 3' Adapter Illumina Small RNA 5' Adapter Nextera Transposase Sequence SOLID Small RNA Adapter 1 0.0 0.0 0.0 0.0489723736864181 0.0 2 0.0 0.0 0.0 0.19906363007719952 0.0 3 0.0 0.0 0.0 0.26447349030188294 0.0 4 0.0 0.0 0.0 0.4146781086687903 0.0 5 1.1336197612596783E-4 0.0 0.0 0.8078174418736468 0.0 6 1.1336197612596783E-4 0.0 0.0 1.071270674390396 0.0 7 1.1336197612596783E-4 0.0 0.0 1.2775894709396574 0.0 8 1.1336197612596783E-4 0.0 0.0 1.7820502647002143 0.0 9 1.1336197612596783E-4 0.0 0.0 2.0121750762359287 0.0 10 1.1336197612596783E-4 0.0 0.0 2.5382880074365457 0.0 11 1.1336197612596783E-4 0.0 0.0 2.7916520240780835 0.0 12 1.1336197612596783E-4 0.0 0.0 3.142393978211828 0.0 13 1.1336197612596783E-4 0.0 0.0 3.254849058528788 0.0 14 1.1336197612596783E-4 0.0 0.0 3.3031412603584505 0.0 15 1.1336197612596783E-4 0.0 0.0 3.375239477174566 0.0 16 2.2672395225193566E-4 0.0 0.0 3.5119540203824835 0.0 17 2.2672395225193566E-4 0.0 0.0 3.663178896534524 0.0 18 3.400859283779035E-4 0.0 0.0 3.898404996995908 0.0 19 3.400859283779035E-4 0.0 0.0 4.010293267432238 0.0 20 3.400859283779035E-4 0.0 0.0 4.126829378889733 0.0 21 3.400859283779035E-4 0.0 0.0 4.246312901726503 0.0 22 3.400859283779035E-4 0.0 0.0 4.37599900241461 0.0 23 3.400859283779035E-4 0.0 0.0 4.5197419881423375 0.0 24 3.400859283779035E-4 0.0 0.0 4.628002675342636 0.0 25 3.400859283779035E-4 0.0 0.0 4.7203926858853 0.0 26 3.400859283779035E-4 0.0 0.0 4.815730107807239 0.0 27 3.400859283779035E-4 0.0 0.0 4.911067529729178 0.0 28 3.400859283779035E-4 0.0 0.0 5.008898915125888 0.0 29 3.400859283779035E-4 0.0 0.0 5.107297110403229 0.0 30 3.400859283779035E-4 0.0 0.0 5.250700010202578 0.0 31 4.534479045038713E-4 0.0 0.0 5.368936551301962 0.0 32 4.534479045038713E-4 0.0 0.0 5.473116207361727 0.0 33 4.534479045038713E-4 0.0 0.0 5.5797898268962625 0.0 34 4.534479045038713E-4 0.0 0.0 5.690204391642955 0.0 35 5.668098806298392E-4 0.0 0.0 5.827712468683754 0.0 36 5.668098806298392E-4 0.0 0.0 5.945382199902508 0.0 37 6.80171856755807E-4 0.0 0.0 6.061578225431626 0.0 38 7.935338328817747E-4 0.0 0.0 6.17924795665038 0.0 >>END_MODULE >>Kmer Content fail #Sequence Count PValue Obs/Exp Max Max Obs/Exp Position GTTAGCG 30 2.5270438E-6 44.000004 1 TCCGCGT 20 7.855485E-4 44.0 11 ACGTTAG 25 4.4419947E-5 44.0 1 GCGTTAG 55 1.8189894E-12 44.0 1 GCCGATT 25 4.4419947E-5 44.0 9 GCGCTTA 20 7.855485E-4 44.0 12 GCGCTAG 20 7.855485E-4 44.0 1 CGTTTTT 13725 0.0 43.374866 1 CGTTGAT 95 0.0 41.68421 25 ACGGGAC 200 0.0 40.7 5 CGACGGT 65 0.0 40.615387 28 ACGGTCT 65 0.0 40.615387 30 AACGGGA 240 0.0 40.333336 4 GGGACCG 345 0.0 40.173916 7 GTTTTTT 15075 0.0 40.0597 2 CGACAGG 95 0.0 39.36842 2 TACGCGG 45 2.3499524E-8 39.11111 2 AGGGCGA 570 0.0 38.982452 6 GGCCGAT 75 0.0 38.13333 8 GGGTACC 110 0.0 38.0 7 >>END_MODULE