##FastQC 0.11.5 >>Basic Statistics pass #Measure Value Filename SRR1545995_1.fastq.gz File type Conventional base calls Encoding Illumina 1.5 Total Sequences 393721 Sequences flagged as poor quality 0 Sequence length 50 %GC 42 >>END_MODULE >>Per base sequence quality pass #Base Mean Median Lower Quartile Upper Quartile 10th Percentile 90th Percentile 1 28.88586587964574 31.0 28.0 31.0 23.0 33.0 2 28.685101886869127 31.0 28.0 33.0 16.0 33.0 3 28.05667973006266 31.0 26.0 33.0 16.0 34.0 4 32.004139987453044 35.0 32.0 35.0 25.0 37.0 5 33.59314844775869 35.0 33.0 35.0 28.0 37.0 6 33.43404847595124 35.0 33.0 37.0 28.0 37.0 7 34.2341632780573 35.0 33.0 37.0 31.0 37.0 8 34.651540049933836 35.0 35.0 37.0 32.0 37.0 9 36.550585312950034 39.0 37.0 39.0 32.0 39.0 10 36.3877999903485 39.0 35.0 39.0 32.0 39.0 11 36.37824246103205 38.0 35.0 39.0 32.0 39.0 12 35.10573985131603 37.0 34.0 39.0 30.0 39.0 13 34.824807414387344 37.0 33.0 39.0 27.0 39.0 14 35.553678874126604 38.0 33.0 40.0 27.0 41.0 15 36.18016819016512 38.0 34.0 40.0 30.0 41.0 16 35.900284719382505 37.0 34.0 40.0 30.0 41.0 17 35.47159536829379 36.0 33.0 40.0 29.0 41.0 18 35.10190464821536 36.0 33.0 39.0 29.0 40.0 19 34.50092832233993 36.0 33.0 39.0 27.0 40.0 20 34.960311997582046 35.0 34.0 39.0 29.0 40.0 21 35.0505611841888 35.0 34.0 39.0 30.0 40.0 22 35.430378364374775 35.0 34.0 39.0 30.0 40.0 23 35.805743153146516 35.0 34.0 40.0 31.0 41.0 24 35.39436555327249 35.0 34.0 39.0 31.0 41.0 25 35.06580040180737 35.0 34.0 39.0 30.0 41.0 26 35.14934433266196 35.0 34.0 39.0 30.0 41.0 27 35.478041557346444 35.0 34.0 40.0 31.0 41.0 28 35.4290042949195 35.0 34.0 40.0 31.0 41.0 29 35.586519388094615 36.0 35.0 40.0 31.0 41.0 30 35.25291259546735 36.0 34.0 40.0 30.0 41.0 31 34.514643618196644 35.0 34.0 39.0 27.0 40.0 32 34.39739307783938 35.0 34.0 39.0 26.0 40.0 33 34.03358215589212 35.0 33.0 40.0 23.0 41.0 34 33.57406640743064 35.0 33.0 40.0 20.0 41.0 35 33.230767472397964 35.0 33.0 40.0 18.0 41.0 36 32.831835233579106 35.0 33.0 40.0 15.0 41.0 37 32.73263300662144 35.0 33.0 40.0 15.0 41.0 38 32.59596008340932 35.0 32.0 39.0 15.0 41.0 39 32.39536880176572 35.0 32.0 39.0 14.0 40.0 40 32.24731218299252 35.0 31.0 39.0 12.0 40.0 41 31.93645754226978 35.0 31.0 39.0 11.0 40.0 42 32.13719867621996 35.0 32.0 39.0 10.0 40.0 43 31.902697595505447 35.0 31.0 39.0 10.0 40.0 44 31.749896500313675 35.0 31.0 39.0 10.0 40.0 45 31.668643531841074 35.0 31.0 38.0 10.0 40.0 46 31.517531449935362 35.0 31.0 38.0 10.0 40.0 47 31.50882985667516 35.0 31.0 38.0 10.0 40.0 48 31.56466635002959 35.0 31.0 38.0 10.0 40.0 49 31.662075429047473 35.0 31.0 38.0 10.0 40.0 50 31.70333307088014 35.0 31.0 39.0 10.0 40.0 >>END_MODULE >>Per sequence quality scores pass #Quality Count 11 2.0 12 0.0 13 9.0 14 23.0 15 40.0 16 120.0 17 291.0 18 514.0 19 889.0 20 1441.0 21 1978.0 22 2836.0 23 3915.0 24 5749.0 25 8628.0 26 12177.0 27 14148.0 28 13020.0 29 12562.0 30 13558.0 31 16193.0 32 21702.0 33 34372.0 34 55554.0 35 35873.0 36 32985.0 37 45721.0 38 48974.0 39 10447.0 >>END_MODULE >>Per base sequence content fail #Base G A T C 1 26.641454227739946 21.65721411862715 27.12809324369287 24.573238409940036 2 38.44067245587611 19.864828139723308 29.095730225210236 12.598769179190342 3 26.650851745271396 19.21233563868831 41.20430457100333 12.932508045036966 4 23.766321837036884 24.69693005961074 37.187246806748945 14.349501296603432 5 20.05430241211416 28.076480553488388 38.53007586590505 13.33914116849241 6 17.498177643559778 35.796160225134045 36.32115127209369 10.384510859212488 7 73.008043767033 5.410430228512069 18.749825383964787 2.8317006204901443 8 74.60816161698258 4.1669100708369635 18.141018640103017 3.0839096720774357 9 71.59359038506963 5.0096388051437435 19.47114835124365 3.925622458542979 10 48.18894597951341 18.051107256153472 23.894077278072544 9.865869486260575 11 43.21994508801918 17.248508461575582 28.633473957447027 10.898072492958212 12 38.79041250022224 18.287061142280955 30.921896469835236 12.000629887661567 13 19.975058480497612 35.796160225134045 31.93428849362874 12.294492800739611 14 14.154185324125459 37.473236124057394 34.80053134072097 13.572047211096184 15 12.386690067331942 19.845779117700097 54.485282725584874 13.282248089383092 16 14.444238432798858 15.712141338663674 52.76426708252798 17.079353146009485 17 15.387038029467567 15.982637451393245 36.67901889916972 31.95130561996947 18 19.899624353285702 19.907751936015604 41.61144566837939 18.58117804231931 19 25.80304327175843 21.375288592683653 34.37408723436139 18.447580901196535 20 27.55453735005245 19.627096344873653 34.176739366200934 18.641626938872957 21 19.885147096548064 25.635411877954184 35.87210232626657 18.607338699231182 22 19.954993510633166 21.310775904765052 34.865298015599876 23.868932569001906 23 17.079607132969794 26.50379329525222 33.52526281300718 22.891336758770805 24 17.93884501969669 20.212536288386953 45.819755613746786 16.028863078169568 25 15.609276619738344 21.35217577929549 43.56993911932561 19.468608481640555 26 14.488686150853013 29.21129429215104 36.54237391452323 19.757645642472717 27 15.328113054675773 29.762953969943183 37.07955633557773 17.829376639803314 28 13.738408670098877 24.90646930186604 44.89219523469665 16.462926793338433 29 14.760706185344445 21.53657031248016 44.34282143954729 19.359902062628105 30 17.42680730771282 26.47509276873725 38.94407461120946 17.154025312340465 31 26.60843592289972 23.036109326147194 32.99011228763516 17.365342463317933 32 27.626161672859716 22.90149623718318 33.386839919638525 16.085502170318573 33 26.309747257575793 23.869694529882835 31.772498799911613 18.048059412629755 34 18.574574381351262 25.080958343598642 33.97862953715956 22.365837737890537 35 19.344916831969847 23.39448492714384 36.304388132713264 20.956210108173046 36 27.897419746470213 22.971342651268284 31.379326985352574 17.75191061690893 37 19.564107578716907 29.274537045268094 32.80647971533141 18.354875660683582 38 20.04617482938426 30.75070925858666 28.70230442369089 20.50081148833819 39 19.583918561621047 29.252948153641796 31.246491805110725 19.916641479626435 40 23.519192524655786 24.025896510473153 29.968175433873224 22.48673553099784 41 17.55964248795467 22.76154942205267 31.756497621412116 27.92231046858054 42 21.647054640214773 23.18443771096792 28.567183360806258 26.601324288011053 43 21.185560333332486 24.136126851247457 29.458169617571833 25.220143197848223 44 19.421620893983302 28.353834314146315 30.57495028205252 21.649594509817867 45 17.085956806977528 33.82953919145791 27.120219647923278 21.964284353641283 46 21.77557204213136 30.360585287551338 28.882127191589984 18.981715478727324 47 20.356292907922107 26.205612603848916 30.220892459381137 23.21720202884784 48 21.784461585742186 22.598489793534 33.72591251165165 21.89113610907216 49 20.27120727621844 22.313516424066787 35.387749192956434 22.02752710675834 50 18.760492836297786 29.10842957322571 31.02399922787964 21.107078362596866 >>END_MODULE >>Per sequence GC content fail #GC Content Count 0 132.0 1 259.0 2 386.0 3 6071.5 4 11757.0 5 8381.5 6 5006.0 7 5130.5 8 5255.0 9 5714.5 10 6174.0 11 6197.5 12 6221.0 13 5852.0 14 5483.0 15 5006.5 16 4530.0 17 4199.0 18 3868.0 19 3453.5 20 3039.0 21 2828.5 22 2618.0 23 2535.5 24 2453.0 25 2387.5 26 2322.0 27 2514.0 28 2706.0 29 3225.0 30 3744.0 31 4544.5 32 5345.0 33 5719.5 34 6094.0 35 7121.5 36 8149.0 37 9093.5 38 10038.0 39 13631.0 40 17224.0 41 23279.5 42 29335.0 43 35064.5 44 40794.0 45 40636.0 46 40478.0 47 37243.5 48 34009.0 49 31337.0 50 28665.0 51 26382.0 52 24099.0 53 21681.0 54 19263.0 55 17221.0 56 15179.0 57 13918.0 58 12657.0 59 11468.0 60 10279.0 61 9314.0 62 8349.0 63 7108.5 64 5868.0 65 4968.5 66 4069.0 67 3465.0 68 2861.0 69 2393.5 70 1926.0 71 1670.0 72 1414.0 73 1106.0 74 798.0 75 618.5 76 439.0 77 357.5 78 276.0 79 230.5 80 185.0 81 172.0 82 159.0 83 96.0 84 33.0 85 25.0 86 17.0 87 12.5 88 8.0 89 8.5 90 9.0 91 6.5 92 4.0 93 2.5 94 1.0 95 0.5 96 0.0 97 1.0 98 2.0 99 1.5 100 1.0 >>END_MODULE >>Per base N content pass #Base N-Count 1 0.0 2 0.0 3 0.0 4 0.0 5 0.0 6 0.0 7 0.0 8 0.0 9 0.0 10 0.0 11 0.0 12 0.0 13 0.0 14 0.0 15 0.0 16 0.0 17 0.0 18 0.0 19 0.0 20 0.0 21 0.0 22 0.0 23 0.0 24 0.0 25 0.0 26 0.0 27 0.0 28 0.0 29 0.0 30 0.0 31 0.0 32 0.0 33 0.0 34 0.0 35 0.0 36 0.0 37 0.0 38 0.0 39 0.0 40 0.0 41 0.0 42 0.0 43 0.0 44 0.0 45 0.0 46 0.0 47 0.0 48 0.0 49 0.0 50 0.0 >>END_MODULE >>Sequence Length Distribution pass #Length Count 50 393721.0 >>END_MODULE >>Sequence Duplication Levels fail #Total Deduplicated Percentage 34.16339481866969 #Duplication Level Percentage of deduplicated Percentage of total 1 74.97638369558572 25.614477982683642 2 8.072787233893456 5.51587635117237 3 3.923398542663014 4.021098403319694 4 2.264972846402335 3.095166464208363 5 1.605973767005323 2.743275793531455 6 1.1624988707233601 2.3828944738067883 7 0.8579385441764462 2.0517065250398234 8 0.7096698984342703 1.9395786344908155 9 0.5831564881104049 1.793034480994616 >10 5.44603651539646 39.586857234096186 >50 0.37115096480712206 7.889413119892151 >100 0.024545053784839736 1.3124458504329737 >500 7.437895086315072E-4 0.15678201156188667 >1k 0.0 0.0 >5k 7.437895086315072E-4 1.8973926747692185 >10k+ 0.0 0.0 >>END_MODULE >>Overrepresented sequences fail #Sequence Count Percentage Possible Source CGTTTTTTTTTTTTTTTTTTTTTTTTTTTTTTTTTTTTTTTTTTTTTTTT 7467 1.896520632630721 No Hit GACCAGAAAAATGGTCCTGCCAAGCGGCTACAGTGTTCTTCTTTCAGATA 617 0.15670995451093542 No Hit GAATGATACCTGTCTCTTATACACATCTGACGCGCATGATTTCGTATGCC 477 0.12115178006761133 No Hit GAATCTGTCTCTTATACACATCTGACGCGCATGATTTCGTATGCCGTCTT 469 0.11911988438513567 No Hit >>END_MODULE >>Adapter Content warn #Position Illumina Universal Adapter Illumina Small RNA 3' Adapter Illumina Small RNA 5' Adapter Nextera Transposase Sequence SOLID Small RNA Adapter 1 0.0 0.0 0.0 0.0396219658082754 0.0 2 0.0 0.0 0.0 0.16763139380424208 0.0 3 0.0 0.0 0.0 0.21868277282644308 0.0 4 0.0 0.0 0.0 0.3433903703383868 0.0 5 0.0 0.0 0.0 0.6578262272014955 0.0 6 0.0 0.0 0.0 0.8988598525351709 0.0 7 0.0 0.0 0.0 1.0890960858069547 0.0 8 0.0 0.0 0.0 1.5912283063387527 0.0 9 2.539869603094577E-4 0.0 0.0 1.8248963098234536 0.0 10 2.539869603094577E-4 0.0 0.0 2.278517020936145 0.0 11 2.539869603094577E-4 0.0 0.0 2.509137180897133 0.0 12 5.079739206189154E-4 0.0 0.0 2.836018398815405 0.0 13 7.619608809283731E-4 0.0 0.0 2.944978804788162 0.0 14 7.619608809283731E-4 0.0 0.0 2.9802829922711767 0.0 15 7.619608809283731E-4 0.0 0.0 3.043525745388232 0.0 16 7.619608809283731E-4 0.0 0.0 3.148422359996038 0.0 17 7.619608809283731E-4 0.0 0.0 3.2642404138971504 0.0 18 7.619608809283731E-4 0.0 0.0 3.469715864787502 0.0 19 7.619608809283731E-4 0.0 0.0 3.5601352226576686 0.0 20 7.619608809283731E-4 0.0 0.0 3.655126345813406 0.0 21 7.619608809283731E-4 0.0 0.0 3.7493555080882146 0.0 22 7.619608809283731E-4 0.0 0.0 3.847648461727975 0.0 23 7.619608809283731E-4 0.0 0.0 3.9530530502563996 0.0 24 0.0010159478412378308 0.0 0.0 4.032296981872951 0.0 25 0.0010159478412378308 0.0 0.0 4.105191239481765 0.0 26 0.0010159478412378308 0.0 0.0 4.178847457971508 0.0 27 0.0010159478412378308 0.0 0.0 4.245138054612276 0.0 28 0.0010159478412378308 0.0 0.0 4.317016364379853 0.0 29 0.0012699348015472885 0.0 0.0 4.386862778464954 0.0 30 0.0012699348015472885 0.0 0.0 4.489981484350594 0.0 31 0.0012699348015472885 0.0 0.0 4.5870045031888065 0.0 32 0.0012699348015472885 0.0 0.0 4.668026343527523 0.0 33 0.0012699348015472885 0.0 0.0 4.761493544921404 0.0 34 0.0012699348015472885 0.0 0.0 4.852674863672499 0.0 35 0.0012699348015472885 0.0 0.0 4.976366513343205 0.0 36 0.0015239217618567462 0.0 0.0 5.066531884253062 0.0 37 0.0015239217618567462 0.0 0.0 5.155935294281991 0.0 38 0.0015239217618567462 0.0 0.0 5.253720274001132 0.0 >>END_MODULE >>Kmer Content warn #Sequence Count PValue Obs/Exp Max Max Obs/Exp Position CGGGTAT 20 7.8501686E-4 44.0 6 TCGTTCA 20 7.8501686E-4 44.0 16 TAGCCTT 20 7.8501686E-4 44.0 38 TCGATAG 20 7.8501686E-4 44.0 1 TGGTTAG 20 7.8501686E-4 44.0 1 CCCGTGC 20 7.8501686E-4 44.0 33 CGGATGC 20 7.8501686E-4 44.0 15 ACTACGG 20 7.8501686E-4 44.0 2 GCGATAT 45 4.783942E-10 44.0 9 TACTCGG 25 4.4374923E-5 44.0 2 TATAGCG 20 7.8501686E-4 44.0 1 AACTCGA 20 7.8501686E-4 44.0 13 ATGTTAG 30 2.5234604E-6 44.0 1 TGTCGGG 30 2.5234604E-6 44.0 3 AATACGG 20 7.8501686E-4 44.0 2 ACCTTAT 25 4.4374923E-5 44.0 39 TACACAA 75 0.0 44.0 30 ACGGTCT 45 4.783942E-10 44.0 30 CGTTTTT 5340 0.0 43.71161 1 GCGTAGG 95 0.0 41.68421 2 >>END_MODULE