##FastQC 0.11.5 >>Basic Statistics pass #Measure Value Filename SRR1545994_1.fastq.gz File type Conventional base calls Encoding Illumina 1.5 Total Sequences 336446 Sequences flagged as poor quality 0 Sequence length 50 %GC 42 >>END_MODULE >>Per base sequence quality pass #Base Mean Median Lower Quartile Upper Quartile 10th Percentile 90th Percentile 1 25.91879826183102 28.0 25.0 30.0 16.0 33.0 2 26.1639757940353 30.0 25.0 31.0 10.0 33.0 3 26.313824506755914 30.0 25.0 31.0 16.0 33.0 4 27.945792192506374 32.0 19.0 35.0 10.0 37.0 5 31.18534326459521 33.0 30.0 35.0 19.0 37.0 6 29.787778722291243 33.0 28.0 35.0 17.0 36.0 7 29.702540675175214 32.0 28.0 35.0 17.0 35.0 8 32.31989383140237 33.0 32.0 35.0 28.0 35.0 9 26.956709249032535 30.0 23.0 34.0 10.0 35.0 10 31.629369943467896 34.0 30.0 37.0 17.0 37.0 11 33.62012626097501 35.0 32.0 37.0 27.0 39.0 12 32.93656931572971 35.0 31.0 37.0 23.0 39.0 13 32.5015188172842 35.0 30.0 37.0 22.0 39.0 14 32.263843231900516 35.0 29.0 38.0 20.0 40.0 15 31.451888267359397 33.0 27.0 38.0 17.0 40.0 16 30.263299311033567 33.0 26.0 37.0 17.0 40.0 17 30.309954643538635 32.0 25.0 37.0 17.0 40.0 18 31.26491621240853 34.0 27.0 37.0 18.0 39.0 19 30.909313827479 34.0 27.0 37.0 18.0 39.0 20 31.55951029288504 34.0 29.0 36.0 19.0 39.0 21 32.33445783275771 34.0 31.0 37.0 23.0 39.0 22 32.70360771119288 34.0 31.0 37.0 24.0 39.0 23 34.0234480421821 35.0 33.0 38.0 28.0 39.0 24 33.67115971062221 35.0 33.0 38.0 26.0 40.0 25 32.5054094862177 34.0 31.0 37.0 23.0 39.0 26 26.136336886157064 33.0 19.0 35.0 0.0 38.0 27 29.28857231175285 33.0 23.0 36.0 12.0 39.0 28 30.788530700320408 33.0 27.0 36.0 18.0 39.0 29 32.14056044655012 34.0 30.0 37.0 23.0 39.0 30 31.883639573661153 34.0 30.0 37.0 21.0 39.0 31 30.800865517794833 33.0 29.0 36.0 18.0 38.0 32 30.933383068902586 34.0 29.0 36.0 18.0 38.0 33 30.640072998341488 33.0 29.0 36.0 17.0 38.0 34 30.6033390202291 34.0 29.0 37.0 15.0 39.0 35 29.812320550697585 34.0 27.0 36.0 10.0 39.0 36 29.461134922097454 33.0 25.0 36.0 10.0 39.0 37 29.46821778234843 33.0 26.0 36.0 10.0 39.0 38 29.211944858907522 33.0 26.0 36.0 10.0 38.0 39 29.06016121457827 33.0 24.0 36.0 9.0 38.0 40 29.06024740968833 33.0 25.0 36.0 10.0 38.0 41 28.481557218691854 33.0 23.0 35.0 9.0 38.0 42 28.661119466422548 33.0 24.0 35.0 8.0 38.0 43 28.178706241120416 32.0 23.0 35.0 8.0 38.0 44 27.988934331215113 32.0 23.0 35.0 8.0 38.0 45 27.40874018416031 31.0 23.0 34.0 8.0 37.0 46 26.975330365051153 31.0 22.0 34.0 7.0 38.0 47 27.19983295982119 31.0 23.0 34.0 8.0 37.0 48 27.393126980258348 31.0 23.0 34.0 8.0 37.0 49 27.25243575492055 31.0 23.0 34.0 8.0 37.0 50 28.955639240769692 33.0 24.0 36.0 8.0 39.0 >>END_MODULE >>Per sequence quality scores pass #Quality Count 9 2.0 10 4.0 11 1.0 12 17.0 13 49.0 14 154.0 15 333.0 16 635.0 17 1112.0 18 1941.0 19 2791.0 20 4076.0 21 5571.0 22 7380.0 23 9855.0 24 12328.0 25 15639.0 26 18177.0 27 19671.0 28 21806.0 29 24942.0 30 29507.0 31 34239.0 32 35582.0 33 33472.0 34 26207.0 35 19536.0 36 9377.0 37 1997.0 38 45.0 >>END_MODULE >>Per base sequence content fail #Base G A T C 1 24.791199776487165 22.3269113022595 27.070020151822284 25.81186876943105 2 38.410324390838355 17.00540354172735 31.0043810893873 13.579890978046997 3 27.809217526735345 14.992599109515345 43.19058630508314 14.007597058666175 4 25.026601594312314 24.381327166915344 36.39960053024854 14.192470708523805 5 19.384685803962597 28.188476011009193 39.556422130148675 12.870416054879536 6 17.359695166534898 34.36836817795426 37.722546857445174 10.549389798065663 7 75.49621633189278 3.7705902284467645 18.7949923613299 1.9382010783305494 8 77.95574921384116 2.6509454711900275 17.593610861772767 1.7996944531960553 9 66.41095450681536 2.908936352341832 17.42775958103232 13.252349559810488 10 50.31951635626519 17.013725828216117 23.881098304036904 8.785659511481784 11 45.396289449124076 16.23499759248141 28.579623475981286 9.789089482413225 12 40.3039417915505 17.889052032124024 30.916699856737782 10.89030631958769 13 19.497036671560963 37.211320687420866 31.840770881508472 11.450871759509699 14 13.230949394553656 38.2513092739994 35.44788762535444 13.069853706092507 15 10.71672720139339 18.059956129661224 55.08848373884665 16.13483293009874 16 12.681975710812434 13.513907135171765 53.397870683556945 20.406246470458854 17 14.342569089839083 14.509906493166808 37.73176081748632 33.4157635995078 18 19.197137133447864 19.08300291874476 43.22446990007312 18.495390047734258 19 26.69611170886264 20.228803433537625 35.1780077635044 17.897077094095337 20 28.379888600250858 18.793506238742623 34.92120578042241 17.905399380584104 21 19.55945382022672 25.37554317780565 36.728033622037415 18.336969379930213 22 19.42600001188898 20.71625164216546 35.166713231841065 24.691035114104494 23 16.14166909400023 26.540366061715698 34.182900079061724 23.135064765222353 24 16.91772230907783 19.33623820761727 48.52754974052299 15.218489742781902 25 14.658518751894805 19.996968309921947 45.973499462023625 19.37101347615962 26 11.24727296505234 41.18759028194718 30.57964725394268 16.9854894990578 27 14.119056252712173 31.264155317643844 37.54064545276211 17.07614297688188 28 12.65403660617157 24.805763777842508 46.80870035607497 15.731499259910953 29 13.745445034269988 21.077973879909408 45.89889610814217 19.27768497767844 30 16.573536317863788 26.926460709891035 39.72851512575569 16.77148784648948 31 27.532798725501266 22.654452720496007 33.465697318440405 16.34705123556232 32 28.4018832145426 22.077242707596465 33.86100592665688 15.659868151204057 33 26.995714022458284 23.337771886127342 32.11570356015527 17.550810531259103 34 18.116726012495317 24.33496014219221 34.00189034793102 23.546423497381454 35 18.942415721988077 22.73173109503457 36.69117778187287 21.634675401104488 36 28.72942463277911 22.155115531169937 31.079281667786212 18.036178168264744 37 18.95995196851798 29.90048923155573 32.232215570998015 18.907343228928266 38 19.327618696611047 31.820559614321464 28.160834130885785 20.6909875581817 39 19.004238421618922 29.811321876318935 30.981494801543192 20.202944900518954 40 23.65045207849105 23.3035910666199 29.701051580342757 23.34490527454629 41 16.998270153308408 21.90306914036725 31.478751419247068 29.619909287077274 42 20.762024217853682 22.149171040820814 27.678735963572166 29.410068777753338 43 20.519786236127047 23.1300119484256 29.38629081635686 26.963910999090494 44 18.408897713154563 27.640691225337793 30.861118871973513 23.08929218953413 45 16.199627874904145 35.14323249496204 26.408398375965238 22.248741254168575 46 20.64551220701093 30.321061923755966 28.574570659184534 20.458855210048565 47 19.611468110781523 25.781551868650542 29.53846976929433 25.068510251273608 48 20.928767172146497 21.818954601927203 34.46229112547036 22.789987100455942 49 19.899181443678927 21.831438031660355 35.20208294941833 23.06729757524239 50 18.31616366370829 29.89692253734626 30.71637053197244 21.070543266973004 >>END_MODULE >>Per sequence GC content fail #GC Content Count 0 80.0 1 167.0 2 254.0 3 3429.5 4 6605.0 5 5406.5 6 4208.0 7 4149.5 8 4091.0 9 4534.0 10 4977.0 11 5272.5 12 5568.0 13 5531.0 14 5494.0 15 5278.0 16 5062.0 17 4754.0 18 4446.0 19 4095.5 20 3745.0 21 3500.5 22 3256.0 23 3080.0 24 2904.0 25 2702.5 26 2501.0 27 2601.5 28 2702.0 29 3095.5 30 3489.0 31 4115.5 32 4742.0 33 5104.5 34 5467.0 35 5971.0 36 6475.0 37 7261.5 38 8048.0 39 10943.0 40 13838.0 41 18873.5 42 23909.0 43 28307.5 44 32706.0 45 33309.0 46 33912.0 47 31351.5 48 28791.0 49 26586.0 50 24381.0 51 22672.5 52 20964.0 53 18884.0 54 16804.0 55 15000.0 56 13196.0 57 12124.5 58 11053.0 59 10102.0 60 9151.0 61 8172.5 62 7194.0 63 6278.5 64 5363.0 65 4581.5 66 3800.0 67 3189.0 68 2578.0 69 2180.5 70 1783.0 71 1490.0 72 1197.0 73 951.0 74 705.0 75 548.5 76 392.0 77 321.5 78 251.0 79 202.5 80 154.0 81 136.5 82 119.0 83 86.5 84 54.0 85 35.0 86 16.0 87 12.5 88 9.0 89 7.5 90 6.0 91 5.5 92 5.0 93 3.0 94 1.0 95 0.5 96 0.0 97 0.0 98 0.0 99 0.0 100 0.0 >>END_MODULE >>Per base N content pass #Base N-Count 1 0.0 2 0.0 3 0.0 4 0.0 5 0.0 6 0.0 7 0.0 8 0.0 9 0.0 10 0.0 11 0.0 12 0.0 13 0.0 14 0.0 15 0.0 16 0.0 17 0.0 18 0.0 19 0.0 20 0.0 21 0.0 22 0.0 23 0.0 24 0.0 25 0.0 26 0.0 27 0.0 28 0.0 29 0.0 30 0.0 31 0.0 32 0.0 33 0.0 34 0.0 35 0.0 36 0.0 37 0.0 38 0.0 39 0.0 40 0.0 41 0.0 42 0.0 43 0.0 44 0.0 45 0.0 46 0.0 47 0.0 48 0.0 49 0.0 50 0.0 >>END_MODULE >>Sequence Length Distribution pass #Length Count 50 336446.0 >>END_MODULE >>Sequence Duplication Levels warn #Total Deduplicated Percentage 51.009851620929844 #Duplication Level Percentage of deduplicated Percentage of total 1 83.20837392561927 42.44446807564687 2 6.513387286716677 6.644938380901371 3 2.586982163675031 3.9588472894516613 4 1.5605492662800575 3.184135460803867 5 0.9884343467921202 2.520994468344838 6 0.7360953052715552 2.252886738045905 7 0.5544400397028875 1.9797332910562717 8 0.4532575631261438 1.8496480832903068 9 0.36712026482960414 1.6854075212395119 >10 2.9449495477121306 29.18295602824997 >50 0.07639170589488588 2.437372413614868 >100 0.009392422855928593 0.660527604685565 >500 0.0 0.0 >1k 6.261615237285728E-4 1.1980846446690303 >5k 0.0 0.0 >10k+ 0.0 0.0 >>END_MODULE >>Overrepresented sequences fail #Sequence Count Percentage Possible Source CGTTTTTTTTTTTTTTTTTTTTTTTTTTTTTTTTTTTTTTTTTTTTTTTT 3751 1.1148891649774406 No Hit >>END_MODULE >>Adapter Content pass #Position Illumina Universal Adapter Illumina Small RNA 3' Adapter Illumina Small RNA 5' Adapter Nextera Transposase Sequence SOLID Small RNA Adapter 1 0.0 0.0 0.0 0.027641880123407618 0.0 2 0.0 0.0 0.0 0.12186205215695832 0.0 3 0.0 0.0 0.0 0.16377070911825375 0.0 4 0.0 0.0 0.0 0.24402132883137265 0.0 5 0.0 0.0 0.0 0.43305612193338605 0.0 6 0.0 0.0 0.0 0.5617543379918323 0.0 7 0.0 0.0 0.0 0.6625134494094149 0.0 8 0.0 0.0 0.0 0.9552795991035709 0.0 9 0.0 0.0 0.0 1.1425310451008484 0.0 10 0.0 0.0 0.0 1.4397555625568441 0.0 11 0.0 0.0 0.0 1.604715169744922 0.0 12 0.0 0.0 0.0 1.7993972286785993 0.0 13 0.0 0.0 0.0 1.8680560922109344 0.0 14 0.0 0.0 0.0 1.88915903295031 0.0 15 0.0 0.0 0.0 1.9272037711846774 0.0 16 0.0 0.0 0.0 1.9946737366471885 0.0 17 0.0 0.0 0.0 2.086516112541091 0.0 18 0.0 0.0 0.0 2.2107559608376977 0.0 19 0.0 0.0 0.0 2.2690119662590726 0.0 20 0.0 0.0 0.0 2.331429114924832 0.0 21 0.0 0.0 0.0 2.385821201619279 0.0 22 0.0 0.0 0.0 2.4449688805930223 0.0 23 0.0 0.0 0.0 2.5145194176777252 0.0 24 0.0 0.0 0.0 2.5617781159532287 0.0 25 0.0 0.0 0.0 2.607550691641452 0.0 26 0.0 0.0 0.0 2.6461898789107314 0.0 27 0.0 0.0 0.0 2.7056347824019307 0.0 28 0.0 0.0 0.0 2.754082378747258 0.0 29 0.0 0.0 0.0 2.8087716899591615 0.0 30 0.0 0.0 0.0 2.888725085154824 0.0 31 0.0 0.0 0.0 2.957681173204615 0.0 32 0.0 0.0 0.0 3.0215844444576545 0.0 33 0.0 0.0 0.0 3.0845960421583256 0.0 34 0.0 0.0 0.0 3.1577132734525004 0.0 35 0.0 0.0 0.0 3.2427194854449155 0.0 36 0.0 0.0 0.0 3.3107838999423382 0.0 37 0.0 0.0 0.0 3.3800372125095857 0.0 38 0.0 0.0 0.0 3.4558294644608645 0.0 >>END_MODULE >>Kmer Content fail #Sequence Count PValue Obs/Exp Max Max Obs/Exp Position AAGTCGT 30 2.522358E-6 44.000004 33 TCGTTCA 40 8.281859E-9 44.0 16 TCGTTAG 25 4.436107E-5 44.0 1 TCGCAAT 35 1.4420038E-7 44.0 21 AGTCACG 20 7.848533E-4 44.0 1 CCGATTC 20 7.848533E-4 44.0 9 CGACGGT 35 1.4420038E-7 44.0 28 ACTGACG 35 1.4420038E-7 44.0 26 TCACATC 25 4.436107E-5 44.0 17 GCGAAAG 25 4.436107E-5 44.0 1 AGGGTCC 35 1.4420038E-7 44.0 6 ATATGAG 25 4.436107E-5 44.0 1 AAGCGAC 25 4.436107E-5 44.0 15 GACCCCG 20 7.848533E-4 44.0 43 ATGTACG 20 7.848533E-4 44.0 1 AGTGCTA 25 4.436107E-5 44.0 25 TATCTCG 20 7.848533E-4 44.0 25 AGGTTAG 25 4.436107E-5 44.0 1 TAGGGAC 80 0.0 44.0 5 CGTGTTT 50 2.7284841E-11 44.0 1 >>END_MODULE