##FastQC 0.11.5 >>Basic Statistics pass #Measure Value Filename SRR1545987_1.fastq.gz File type Conventional base calls Encoding Illumina 1.5 Total Sequences 692880 Sequences flagged as poor quality 0 Sequence length 50 %GC 42 >>END_MODULE >>Per base sequence quality pass #Base Mean Median Lower Quartile Upper Quartile 10th Percentile 90th Percentile 1 29.164728380094676 31.0 28.0 33.0 25.0 33.0 2 28.71511950121233 31.0 28.0 33.0 16.0 33.0 3 28.243108474771965 31.0 27.0 33.0 16.0 34.0 4 32.0111346842166 35.0 32.0 35.0 25.0 37.0 5 33.68045116037409 35.0 33.0 35.0 30.0 37.0 6 33.550503694723474 35.0 33.0 37.0 28.0 37.0 7 34.32492783743217 35.0 35.0 37.0 31.0 37.0 8 34.78599613208637 35.0 35.0 37.0 32.0 37.0 9 36.73684765038679 39.0 37.0 39.0 32.0 39.0 10 36.50330360235539 39.0 35.0 39.0 32.0 39.0 11 36.478160720471074 39.0 35.0 39.0 32.0 39.0 12 35.30757273986838 37.0 34.0 39.0 30.0 39.0 13 35.16928183812493 37.0 34.0 39.0 27.0 39.0 14 35.98650992956934 38.0 34.0 40.0 29.0 41.0 15 36.57416724396721 38.0 35.0 40.0 31.0 41.0 16 36.22144960166263 38.0 34.0 40.0 31.0 41.0 17 35.79784666897587 37.0 34.0 40.0 30.0 41.0 18 35.420716429973446 37.0 34.0 39.0 29.0 40.0 19 34.7986880845168 37.0 33.0 39.0 27.0 40.0 20 35.28322508948158 35.0 34.0 39.0 30.0 40.0 21 35.38705403533079 35.0 34.0 39.0 30.0 40.0 22 35.72358128391641 35.0 34.0 39.0 31.0 41.0 23 36.07439239117885 36.0 35.0 40.0 32.0 41.0 24 35.6667720240157 35.0 34.0 40.0 31.0 41.0 25 35.30723213254821 35.0 34.0 39.0 30.0 41.0 26 35.40601980140861 35.0 34.0 40.0 30.0 41.0 27 35.76103509987299 35.0 35.0 40.0 31.0 41.0 28 35.71396201362429 36.0 35.0 40.0 31.0 41.0 29 35.87464207366355 36.0 35.0 40.0 31.0 41.0 30 35.53658209213717 36.0 35.0 40.0 31.0 41.0 31 34.81259381133818 35.0 34.0 39.0 29.0 41.0 32 34.7011488280799 35.0 34.0 40.0 27.0 41.0 33 34.31345831890082 35.0 34.0 40.0 24.0 41.0 34 33.80411470961783 35.0 34.0 40.0 21.0 41.0 35 33.44886993418774 35.0 33.0 40.0 18.0 41.0 36 33.02153763999538 35.0 33.0 40.0 15.0 41.0 37 32.89804150790902 35.0 33.0 40.0 15.0 41.0 38 32.76628997806258 35.0 33.0 40.0 15.0 41.0 39 32.54127698880037 35.0 32.0 40.0 12.0 41.0 40 32.40930464149636 35.0 32.0 39.0 12.0 40.0 41 32.11309028980487 35.0 31.0 39.0 10.0 40.0 42 32.27939903013509 35.0 32.0 39.0 10.0 40.0 43 32.05884424431359 35.0 31.0 39.0 10.0 40.0 44 31.87078281953585 35.0 31.0 39.0 10.0 40.0 45 31.804777161990533 35.0 31.0 39.0 10.0 40.0 46 31.62510824385175 35.0 31.0 38.0 10.0 40.0 47 31.6437767001501 35.0 31.0 38.0 10.0 40.0 48 31.67061395912712 35.0 31.0 38.0 10.0 40.0 49 31.713194203902553 35.0 31.0 38.0 10.0 40.0 50 31.78821729592426 35.0 31.0 39.0 10.0 40.0 >>END_MODULE >>Per sequence quality scores pass #Quality Count 11 1.0 12 2.0 13 8.0 14 19.0 15 55.0 16 148.0 17 377.0 18 770.0 19 1313.0 20 2101.0 21 3183.0 22 4555.0 23 6585.0 24 9898.0 25 15089.0 26 22042.0 27 24561.0 28 22535.0 29 20680.0 30 21912.0 31 26247.0 32 35373.0 33 55840.0 34 92188.0 35 61902.0 36 60652.0 37 85814.0 38 97415.0 39 21615.0 >>END_MODULE >>Per base sequence content fail #Base G A T C 1 24.953671631451332 22.084632259554322 28.046703613901396 24.914992495092942 2 38.83053342570142 20.721770003463803 28.231295462417734 12.216401108417042 3 26.453354116152873 18.318034868952775 42.55758572913059 12.671025285763768 4 23.249769079782933 24.580591155755688 38.84770811684563 13.321931647615749 5 19.75536889504676 28.94960166262556 38.85362544740792 12.441403994919757 6 17.75314628795751 36.193424546819074 36.00046184043413 10.052967324789286 7 74.31416695531694 4.771677635376977 18.47174113843667 2.4424142708694148 8 75.80562290728552 3.6908266943770927 17.925903475349266 2.5776469229881074 9 72.45727975984298 5.124408266943771 19.110668514028404 3.3076434591848516 10 44.42544163491514 23.055507447177 23.27473732825309 9.244313589654775 11 40.097852441981296 17.336190971019512 31.468363930262093 11.097592656737097 12 35.979390370626945 19.120915598660662 32.75559981526383 12.144094215448563 13 19.03056806373398 35.22384828541739 33.477802794134625 12.267780856714005 14 13.582438517492207 36.75643690105069 35.92974252395798 13.731382057499134 15 12.580389100565755 20.50600392564369 53.40217642304583 13.511430550744718 16 14.200294423276757 16.69062463918716 51.729015125274216 17.380065812261865 17 14.635867682715622 16.92674056113613 37.45598083362198 30.981410922526265 18 18.860986029326867 20.353019281838126 42.23920447985221 18.546790208982795 19 24.655928876573142 21.573288303891005 34.94068236924143 18.830100450294424 20 27.18320632721395 20.94706154023785 33.97947696570835 17.890255166839857 21 19.4024939383443 25.239435400069276 36.4633125505138 18.894758111072623 22 19.742523957972523 21.90523611592195 34.11514259323404 24.237097332871492 23 17.00785128738021 26.199919177924023 34.33393949890313 22.458290035792633 24 16.990676596236 20.92483546934534 45.79811800023092 16.28636993418774 25 14.956702459300312 22.77695993534234 42.90800715852673 19.35833044683062 26 14.81223299849902 30.435573259438865 36.47413693568872 18.278056806373396 27 15.89683639302621 29.589250663895623 37.43274448677982 17.08116845629835 28 13.758370857868607 24.475666782126776 45.77011892391179 15.99584343609283 29 14.557787784320517 21.564628795751066 44.39109225262672 19.486491167301697 30 17.434909363814803 26.739839510449137 38.799647846668975 17.025603279067084 31 25.876630874033026 23.531347419466574 33.199832582842625 17.392189123657776 32 26.837403302159103 23.09173305622907 34.05380441057614 16.017059231035677 33 25.174633414155412 24.361649924950928 32.10310587691952 18.36061078397414 34 18.685198014086133 25.577589192933843 34.03345456644729 21.70375822653273 35 19.4541623369126 24.013249047454106 35.6335873455721 20.899001270061195 36 27.720384482161414 23.56843897933264 30.565032906130934 18.146143632375015 37 20.293413000808222 29.341733056229074 32.079003579263365 18.28585036369934 38 20.707481815032907 30.166262556286803 28.589366124004158 20.536889504676132 39 20.339164068814224 28.607551091098028 31.155900011546013 19.89738482854174 40 22.646778662971943 25.12368664126544 29.449832582842628 22.779702112919985 41 17.749971134972867 23.11006234845861 31.531434014547973 27.608532502020548 42 21.276267174691142 23.75432975406997 28.78175152984644 26.187651541392448 43 21.69293384135781 25.086306431128047 29.2967036139014 23.924056113612746 44 19.906477312088676 28.506956471539084 30.416666666666664 21.169899549705576 45 17.635954277797023 34.21010853250202 26.41727283223646 21.736664357464498 46 21.17249740214756 30.347101951275835 28.803255975060615 19.677144671515993 47 20.836941461724972 25.654225839972288 30.56373397990994 22.945098718392796 48 22.030510333679715 22.815061771158067 33.105443944117305 22.048983951044914 49 20.468190740099296 23.021446715159914 34.4117307470269 22.09863179771389 50 18.886820228611015 30.037091559866063 30.23034291652234 20.84574529500058 >>END_MODULE >>Per sequence GC content fail #GC Content Count 0 289.0 1 553.5 2 818.0 3 9876.0 4 18934.0 5 14092.5 6 9251.0 7 9618.5 8 9986.0 9 10709.0 10 11432.0 11 11403.5 12 11375.0 13 10750.0 14 10125.0 15 9451.0 16 8777.0 17 8201.0 18 7625.0 19 7018.0 20 6411.0 21 5937.5 22 5464.0 23 5118.5 24 4773.0 25 4788.5 26 4804.0 27 5252.0 28 5700.0 29 7128.5 30 8557.0 31 9928.0 32 11299.0 33 13161.5 34 15024.0 35 15515.0 36 16006.0 37 17398.5 38 18791.0 39 23288.5 40 27786.0 41 39756.0 42 51726.0 43 59651.0 44 67576.0 45 65568.5 46 63561.0 47 59497.0 48 55433.0 49 54049.0 50 52665.0 51 48626.5 52 44588.0 53 39805.5 54 35023.0 55 30927.0 56 26831.0 57 23583.0 58 20335.0 59 18866.0 60 17397.0 61 15900.5 62 14404.0 63 12134.5 64 9865.0 65 8330.0 66 6795.0 67 5655.0 68 4515.0 69 3956.5 70 3398.0 71 2856.0 72 2314.0 73 1931.0 74 1548.0 75 1165.0 76 782.0 77 629.0 78 476.0 79 343.5 80 211.0 81 158.0 82 105.0 83 71.5 84 38.0 85 27.5 86 17.0 87 18.0 88 19.0 89 19.5 90 20.0 91 14.5 92 9.0 93 5.5 94 2.0 95 1.0 96 0.0 97 0.0 98 0.0 99 0.0 100 0.0 >>END_MODULE >>Per base N content pass #Base N-Count 1 0.0 2 0.0 3 0.0 4 0.0 5 0.0 6 0.0 7 0.0 8 0.0 9 0.0 10 0.0 11 0.0 12 0.0 13 0.0 14 0.0 15 0.0 16 0.0 17 0.0 18 0.0 19 0.0 20 0.0 21 0.0 22 0.0 23 0.0 24 0.0 25 0.0 26 0.0 27 0.0 28 0.0 29 0.0 30 0.0 31 0.0 32 0.0 33 0.0 34 0.0 35 0.0 36 0.0 37 0.0 38 0.0 39 0.0 40 0.0 41 0.0 42 0.0 43 0.0 44 0.0 45 0.0 46 0.0 47 0.0 48 0.0 49 0.0 50 0.0 >>END_MODULE >>Sequence Length Distribution pass #Length Count 50 692880.0 >>END_MODULE >>Sequence Duplication Levels fail #Total Deduplicated Percentage 30.74039659619188 #Duplication Level Percentage of deduplicated Percentage of total 1 75.87253721470864 23.323518847394713 2 7.506787934332852 4.615232765297997 3 3.514676646415237 3.2412766205453414 4 2.1917118979038768 2.6949637186463034 5 1.511446710239201 2.3231235653381277 6 1.130604100471742 2.085313106506927 7 0.8315319222129034 1.7893134749852897 8 0.6663660056391246 1.638748423325354 9 0.5485156473559528 1.5175429685045025 >10 5.410479752104122 36.211435341647515 >50 0.734750543858021 15.190921798779467 >100 0.07964903265596206 3.4964922957721902 >500 4.712960512187104E-4 0.1280723953535517 >1k 0.0 0.0 >5k 0.0 0.0 >10k+ 4.712960512187104E-4 1.7440446779027774 >>END_MODULE >>Overrepresented sequences fail #Sequence Count Percentage Possible Source CGTTTTTTTTTTTTTTTTTTTTTTTTTTTTTTTTTTTTTTTTTTTTTTTT 12038 1.737385983142824 No Hit GACCAGAAAAATGGTCCTGCCAAGCGGCTACAGTGTTCTTCTTTCAGATA 884 0.12758341992841474 No Hit >>END_MODULE >>Adapter Content warn #Position Illumina Universal Adapter Illumina Small RNA 3' Adapter Illumina Small RNA 5' Adapter Nextera Transposase Sequence SOLID Small RNA Adapter 1 1.4432513566562752E-4 0.0 0.0 0.03261748066043182 0.0 2 1.4432513566562752E-4 0.0 0.0 0.1268617942500866 0.0 3 1.4432513566562752E-4 0.0 0.0 0.1678501327791248 0.0 4 1.4432513566562752E-4 0.0 0.0 0.25574414039949195 0.0 5 1.4432513566562752E-4 0.0 0.0 0.4806027017665397 0.0 6 1.4432513566562752E-4 0.0 0.0 0.6682253781318555 0.0 7 1.4432513566562752E-4 0.0 0.0 0.8184678443597737 0.0 8 1.4432513566562752E-4 0.0 0.0 1.255051379748297 0.0 9 1.4432513566562752E-4 0.0 0.0 1.492177577646923 0.0 10 1.4432513566562752E-4 0.0 0.0 1.9446368779586654 0.0 11 2.8865027133125504E-4 0.0 0.0 2.210916753261748 0.0 12 2.8865027133125504E-4 0.0 0.0 2.5083708578686066 0.0 13 4.329754069968826E-4 0.0 0.0 2.6281607204710773 0.0 14 5.773005426625101E-4 0.0 0.0 2.669726359542778 0.0 15 5.773005426625101E-4 0.0 0.0 2.727456413809029 0.0 16 5.773005426625101E-4 0.0 0.0 2.833968363930262 0.0 17 5.773005426625101E-4 0.0 0.0 2.966458838471308 0.0 18 5.773005426625101E-4 0.0 0.0 3.1751529846438054 0.0 19 5.773005426625101E-4 0.0 0.0 3.266366470384482 0.0 20 5.773005426625101E-4 0.0 0.0 3.3596005080244775 0.0 21 5.773005426625101E-4 0.0 0.0 3.466834083824039 0.0 22 5.773005426625101E-4 0.0 0.0 3.5792633645075624 0.0 23 7.216256783281376E-4 0.0 0.0 3.6948677981757303 0.0 24 7.216256783281376E-4 0.0 0.0 3.7784320517261287 0.0 25 8.659508139937652E-4 0.0 0.0 3.8505946195589424 0.0 26 8.659508139937652E-4 0.0 0.0 3.9239117884770813 0.0 27 8.659508139937652E-4 0.0 0.0 4.001125736058192 0.0 28 8.659508139937652E-4 0.0 0.0 4.076752107146981 0.0 29 8.659508139937652E-4 0.0 0.0 4.165800715852673 0.0 30 8.659508139937652E-4 0.0 0.0 4.28934303198245 0.0 31 0.0011546010853250202 0.0 0.0 4.37781434014548 0.0 32 0.0011546010853250202 0.0 0.0 4.460079667474887 0.0 33 0.0011546010853250202 0.0 0.0 4.546097448331602 0.0 34 0.0011546010853250202 0.0 0.0 4.636444983258285 0.0 35 0.0012989262209906478 0.0 0.0 4.741658007158526 0.0 36 0.0012989262209906478 0.0 0.0 4.843695878074126 0.0 37 0.0012989262209906478 0.0 0.0 4.932744486779818 0.0 38 0.0012989262209906478 0.0 0.0 5.027854751183466 0.0 >>END_MODULE >>Kmer Content fail #Sequence Count PValue Obs/Exp Max Max Obs/Exp Position AACGTAG 55 1.8189894E-12 44.0 1 TCCGATG 20 7.8543153E-4 44.0 18 CCGATCT 20 7.8543153E-4 44.0 12 ACGCACC 25 4.4410048E-5 44.0 21 TATATCG 20 7.8543153E-4 44.0 2 TATTGCG 25 4.4410048E-5 44.0 1 CGGGCTA 20 7.8543153E-4 44.0 6 ACGTCGG 20 7.8543153E-4 44.0 2 CGCACGG 20 7.8543153E-4 44.0 2 CGTCCTA 25 4.4410048E-5 44.0 26 GTGACGG 50 2.7284841E-11 44.0 2 TCGAACG 25 4.4410048E-5 44.0 1 CGTTTTT 9970 0.0 43.42628 1 CGCGACC 135 0.0 40.74074 10 CGTTAGG 120 0.0 40.333332 2 GCGATGT 105 0.0 39.809525 9 CGTAAGG 50 1.3460522E-9 39.6 2 AGGGCGC 100 0.0 39.6 6 GCGCGAC 140 0.0 39.285713 9 CGACCCG 140 0.0 39.285713 32 >>END_MODULE