##FastQC 0.11.5 >>Basic Statistics pass #Measure Value Filename SRR1545975_1.fastq.gz File type Conventional base calls Encoding Illumina 1.5 Total Sequences 1090457 Sequences flagged as poor quality 0 Sequence length 50 %GC 43 >>END_MODULE >>Per base sequence quality pass #Base Mean Median Lower Quartile Upper Quartile 10th Percentile 90th Percentile 1 28.92749553627516 31.0 28.0 31.0 23.0 33.0 2 28.726783357803196 31.0 28.0 33.0 16.0 33.0 3 28.126299340551714 31.0 27.0 33.0 16.0 34.0 4 31.992537073905712 35.0 32.0 35.0 25.0 37.0 5 33.6255239775617 35.0 33.0 35.0 28.0 37.0 6 33.54975849574995 35.0 33.0 37.0 28.0 37.0 7 34.22259658106647 35.0 33.0 37.0 30.0 37.0 8 34.68016895668513 35.0 35.0 37.0 32.0 37.0 9 36.573372448432174 39.0 37.0 39.0 32.0 39.0 10 36.31486706949472 38.0 35.0 39.0 32.0 39.0 11 36.436666461859566 39.0 35.0 39.0 32.0 39.0 12 35.37243559351721 37.0 34.0 39.0 30.0 39.0 13 35.660274545442874 37.0 35.0 39.0 30.0 39.0 14 36.380792640149956 38.0 35.0 40.0 30.0 41.0 15 36.82752919188927 38.0 35.0 40.0 31.0 41.0 16 36.42331242772526 38.0 35.0 40.0 31.0 41.0 17 36.00526293104634 38.0 34.0 40.0 30.0 41.0 18 35.59821524370058 38.0 34.0 39.0 29.0 40.0 19 34.96353180363829 37.0 33.0 39.0 27.0 40.0 20 35.432083979469155 36.0 34.0 39.0 30.0 41.0 21 35.56099048380633 36.0 34.0 39.0 30.0 40.0 22 35.87082755211806 36.0 34.0 40.0 31.0 41.0 23 36.18576064897562 37.0 35.0 40.0 31.0 41.0 24 35.75592343393642 36.0 35.0 40.0 31.0 41.0 25 35.44605151784985 36.0 34.0 40.0 30.0 41.0 26 35.556261273942944 36.0 34.0 40.0 30.0 41.0 27 35.906957358245215 37.0 35.0 40.0 31.0 41.0 28 35.82407284285396 36.0 35.0 40.0 31.0 41.0 29 35.91304929951387 37.0 35.0 40.0 31.0 41.0 30 35.563763633045596 36.0 35.0 40.0 30.0 41.0 31 34.84443586496304 36.0 34.0 40.0 28.0 41.0 32 34.773135483563316 36.0 34.0 40.0 26.0 41.0 33 34.39066923317471 36.0 34.0 40.0 23.0 41.0 34 33.865106097718666 36.0 33.0 40.0 20.0 41.0 35 33.49612135095653 36.0 33.0 40.0 17.0 41.0 36 33.077766477724474 36.0 33.0 40.0 15.0 41.0 37 32.987220954150416 36.0 33.0 40.0 15.0 41.0 38 32.80687913416118 36.0 32.0 40.0 12.0 41.0 39 32.525593397997355 35.0 32.0 40.0 11.0 41.0 40 32.36395107739232 35.0 31.0 40.0 10.0 40.0 41 32.037733720816135 35.0 31.0 39.0 10.0 40.0 42 32.19868183706464 35.0 31.0 39.0 10.0 40.0 43 32.01120264256179 35.0 31.0 39.0 10.0 40.0 44 31.763724750265254 35.0 31.0 39.0 10.0 40.0 45 31.736924060279314 35.0 31.0 39.0 10.0 40.0 46 31.56616446132218 35.0 30.0 39.0 10.0 40.0 47 31.545880305229826 35.0 30.0 39.0 10.0 40.0 48 31.52523391568856 35.0 30.0 38.0 10.0 40.0 49 31.558281527836495 35.0 30.0 38.0 10.0 40.0 50 31.640973463419467 35.0 30.0 39.0 10.0 40.0 >>END_MODULE >>Per sequence quality scores pass #Quality Count 7 1.0 8 1.0 9 0.0 10 1.0 11 3.0 12 9.0 13 22.0 14 58.0 15 119.0 16 306.0 17 691.0 18 1273.0 19 2287.0 20 3646.0 21 5363.0 22 7678.0 23 10799.0 24 15561.0 25 23786.0 26 34113.0 27 39050.0 28 36637.0 29 34308.0 30 35769.0 31 41521.0 32 53901.0 33 79667.0 34 120037.0 35 99695.0 36 106188.0 37 146651.0 38 157760.0 39 33556.0 >>END_MODULE >>Per base sequence content fail #Base G A T C 1 26.88129839140837 21.279885405843604 26.09997459780624 25.738841604941783 2 41.611727926915044 19.42726765016869 26.962548729569345 11.998455693346918 3 27.360455295348647 18.391738509634035 41.31267899605395 12.93512719896337 4 24.39023271894261 23.882463957771833 37.788835323171845 13.938468000113712 5 20.10193891185072 27.71333486785815 38.77209280145847 13.412633418832653 6 18.171647300168644 34.849884039444014 36.821809571583294 10.156659088804052 7 72.68805647540435 5.004874103242953 19.758780034425932 2.5482893869267658 8 73.77191397735078 3.772363330236772 19.594628674032997 2.86109401837945 9 69.86822955879965 5.4101170426711 20.900044660174586 3.821608738354653 10 39.864387133101076 22.310921017518343 26.128678159707352 11.69601368967323 11 33.996388670071354 20.84217901301931 31.837110495874665 13.324321821034669 12 30.322882974752787 19.71045167301416 36.19436621526571 13.772299136967344 13 20.571833644059325 28.467514078959553 36.188955639699685 14.771696637281433 14 16.036670863683756 30.673286521155806 38.34511585509562 14.944926760064817 15 15.76595867604133 20.785688935923197 48.302959218015936 15.145393170019542 16 18.1833854980068 17.966870770695223 46.709590566157125 17.140153165140852 17 18.087554117218744 18.26445242682655 37.403675706607416 26.24431774934729 18 20.49195887595751 20.806872714834242 40.67744074273447 18.023727666473782 19 24.42691458718684 21.670180483962227 35.4531173627204 18.449787566130528 20 25.68583630532887 21.327113311208056 35.176811190170724 17.810239193292354 21 21.639367714637075 23.21797191452758 37.38340897440248 17.75925139643287 22 21.33004786066759 20.744513538819046 35.924479369658776 22.000959230854587 23 18.822291938150702 24.390141014272 35.38012044491438 21.40744660266292 24 18.860807899807146 21.57389057982112 42.248250045623074 17.31705147474866 25 18.305352709918868 21.810213515984582 40.197091678076255 19.68734209602029 26 17.02671448759557 25.972780219669367 36.76018403293298 20.240321259802084 27 17.49624240112173 26.0102874299491 37.77627178329819 18.71719838563098 28 16.9290490133953 23.617070641024817 41.7465337927126 17.707346552867286 29 17.630314629554398 22.011872086657245 41.03793180290465 19.3198814808837 30 19.59857197486925 24.19572711257757 38.573643894257174 17.632057018296 31 25.01162356699989 22.77769779092619 34.43831347774374 17.772365164330182 32 25.083611733429194 22.47846545072387 34.7353449058514 17.702577909995533 33 24.139328740152063 23.933635163972536 33.02028415609236 18.906751939783046 34 19.824073759900664 24.78492962125054 34.578254805095476 20.812741813753316 35 21.161311266744125 24.121538034053614 34.39915558339302 20.317995115809243 36 26.00331787498269 24.091550606763953 31.06440694130993 18.84072457694343 37 21.285020867397797 28.001562647587203 31.60179631108792 19.111620173927076 38 21.295933723200456 28.04200440732647 29.625010431406285 21.037051438066793 39 21.48026011112772 27.23885490211902 30.329302301695527 20.951582685057733 40 22.994395927578985 24.4933087687089 30.490610817299533 22.02168448641258 41 19.687617210032123 23.85678665000087 31.36354757684164 25.092048563125367 42 21.65486580397026 24.84994823271344 29.34907107753905 24.146114885777248 43 21.40753830733353 25.05105657536244 30.405233768961086 23.136171348342945 44 20.49957036361819 26.833887076702705 30.83312776203005 21.83341479764906 45 19.248993770501727 30.221090790375044 28.937867334521215 21.592048104602014 46 21.652298073193165 27.09166890578904 30.61679644405969 20.6392365769581 47 21.299143386671826 25.612472568840406 31.32154683770199 21.76683720678578 48 21.688704827425564 24.389957604930775 32.774974162209055 21.146363405434602 49 21.29318258308214 23.58579934834661 33.11290587340904 22.008112195162212 50 19.936503686069234 27.223907040809497 31.593909709415406 21.24567956370586 >>END_MODULE >>Per sequence GC content fail #GC Content Count 0 463.0 1 970.0 2 1477.0 3 21828.5 4 42180.0 5 29229.5 6 16279.0 7 16275.5 8 16272.0 9 16718.0 10 17164.0 11 16923.0 12 16682.0 13 15834.5 14 14987.0 15 14009.0 16 13031.0 17 12093.0 18 11155.0 19 10228.0 20 9301.0 21 8831.5 22 8362.0 23 8368.0 24 8374.0 25 8238.5 26 8103.0 27 8561.5 28 9020.0 29 10467.5 30 11915.0 31 13776.0 32 15637.0 33 17659.0 34 19681.0 35 22460.0 36 25239.0 37 27292.0 38 29345.0 39 35627.0 40 41909.0 41 52811.0 42 63713.0 43 72168.5 44 80624.0 45 82238.5 46 83853.0 47 81722.0 48 79591.0 49 78577.5 50 77564.0 51 75779.0 52 73994.0 53 66752.5 54 59511.0 55 54528.5 56 49546.0 57 46488.0 58 43430.0 59 39780.5 60 36131.0 61 33392.0 62 30653.0 63 27150.5 64 23648.0 65 20050.0 66 16452.0 67 14192.0 68 11932.0 69 10214.5 70 8497.0 71 7273.0 72 6049.0 73 4880.0 74 3711.0 75 3024.0 76 2337.0 77 1843.0 78 1349.0 79 1000.0 80 651.0 81 485.5 82 320.0 83 231.5 84 143.0 85 126.5 86 110.0 87 72.5 88 35.0 89 27.5 90 20.0 91 14.5 92 9.0 93 7.0 94 5.0 95 3.0 96 1.0 97 1.5 98 2.0 99 1.0 100 0.0 >>END_MODULE >>Per base N content pass #Base N-Count 1 0.0 2 0.0 3 0.0 4 0.0 5 0.0 6 0.0 7 0.0 8 0.0 9 0.0 10 0.0 11 0.0 12 0.0 13 0.0 14 0.0 15 0.0 16 0.0 17 0.0 18 0.0 19 0.0 20 0.0 21 0.0 22 0.0 23 0.0 24 0.0 25 0.0 26 0.0 27 0.0 28 0.0 29 0.0 30 0.0 31 0.0 32 0.0 33 0.0 34 0.0 35 0.0 36 0.0 37 0.0 38 0.0 39 0.0 40 0.0 41 0.0 42 0.0 43 0.0 44 0.0 45 0.0 46 0.0 47 0.0 48 0.0 49 0.0 50 0.0 >>END_MODULE >>Sequence Length Distribution pass #Length Count 50 1090457.0 >>END_MODULE >>Sequence Duplication Levels fail #Total Deduplicated Percentage 31.852693581303882 #Duplication Level Percentage of deduplicated Percentage of total 1 75.5962216538012 24.07943284242859 2 7.445995694629332 4.7435003853747215 3 3.448505650314304 3.295325813785699 4 2.1937991128760923 2.795136436855138 5 1.5995971285315849 2.547573859432507 6 1.2287892151351212 2.348414780742594 7 0.9518979146672645 2.1224358817604974 8 0.802628693009645 2.0452708654398912 9 0.6609528896995757 1.8947816880550135 >10 5.397936901981912 35.37176664000348 >50 0.6103286400259234 13.011374095203815 >100 0.06247874498131194 3.081179164077231 >500 2.8925344893761213E-4 0.046343912426015786 >1k 2.8925344893761213E-4 0.11636652364623845 >5k 0.0 0.0 >10k+ 2.8925344893761213E-4 2.5010971107686375 >>END_MODULE >>Overrepresented sequences fail #Sequence Count Percentage Possible Source CGTTTTTTTTTTTTTTTTTTTTTTTTTTTTTTTTTTTTTTTTTTTTTTTT 27146 2.489414988394774 No Hit GACCAGAAAAATGGTCCTGCCAAGCGGCTACAGTGTTCTTCTTTCAGATA 1263 0.11582299898116111 No Hit >>END_MODULE >>Adapter Content pass #Position Illumina Universal Adapter Illumina Small RNA 3' Adapter Illumina Small RNA 5' Adapter Nextera Transposase Sequence SOLID Small RNA Adapter 1 0.0 0.0 0.0 0.020816960228601404 0.0 2 9.170467061057887E-5 0.0 0.0 0.10445161982544933 0.0 3 9.170467061057887E-5 0.0 0.0 0.15553112135554176 0.0 4 9.170467061057887E-5 0.0 0.0 0.23714827819895695 0.0 5 9.170467061057887E-5 0.0 0.0 0.4376146881536824 0.0 6 9.170467061057887E-5 0.0 0.0 0.6698109141396681 0.0 7 9.170467061057887E-5 0.0 0.0 0.8247001028009358 0.0 8 9.170467061057887E-5 0.0 0.0 1.1878505984188281 0.0 9 9.170467061057887E-5 0.0 0.0 1.3961119053754527 0.0 10 9.170467061057887E-5 0.0 0.0 1.7426638556128302 0.0 11 9.170467061057887E-5 0.0 0.0 1.9995286379930617 0.0 12 9.170467061057887E-5 0.0 0.0 2.2460307925942975 0.0 13 1.8340934122115774E-4 0.0 0.0 2.3383773958991507 0.0 14 1.8340934122115774E-4 0.0 0.0 2.381386886415512 0.0 15 2.751140118317366E-4 0.0 0.0 2.4319161599219408 0.0 16 2.751140118317366E-4 0.0 0.0 2.5351756190294528 0.0 17 3.668186824423155E-4 0.0 0.0 2.6532912347758786 0.0 18 3.668186824423155E-4 0.0 0.0 2.8410106955157333 0.0 19 4.5852335305289433E-4 0.0 0.0 2.9180426188286197 0.0 20 4.5852335305289433E-4 0.0 0.0 3.013782294946064 0.0 21 5.502280236634732E-4 0.0 0.0 3.1140154999234264 0.0 22 5.502280236634732E-4 0.0 0.0 3.213423362865294 0.0 23 5.502280236634732E-4 0.0 0.0 3.3205344181384504 0.0 24 5.502280236634732E-4 0.0 0.0 3.4138897728200197 0.0 25 5.502280236634732E-4 0.0 0.0 3.4848691878726075 0.0 26 5.502280236634732E-4 0.0 0.0 3.5599753131026715 0.0 27 5.502280236634732E-4 0.0 0.0 3.647644978206385 0.0 28 6.419326942740521E-4 0.0 0.0 3.7296289537322425 0.0 29 6.419326942740521E-4 0.0 0.0 3.8159230487767974 0.0 30 6.419326942740521E-4 0.0 0.0 3.9303704776987995 1.8340934122115774E-4 31 6.419326942740521E-4 0.0 0.0 4.022625376333042 1.8340934122115774E-4 32 6.419326942740521E-4 0.0 0.0 4.111487202154693 1.8340934122115774E-4 33 7.33637364884631E-4 0.0 0.0 4.204659147495041 1.8340934122115774E-4 34 7.33637364884631E-4 0.0 0.0 4.300123709600654 1.8340934122115774E-4 35 7.33637364884631E-4 0.0 0.0 4.4150296618757086 1.8340934122115774E-4 36 8.253420354952098E-4 0.0 0.0 4.50554217176835 1.8340934122115774E-4 37 9.170467061057887E-4 0.0 0.0 4.603941283333501 1.8340934122115774E-4 38 9.170467061057887E-4 0.0 0.0 4.716738028184514 1.8340934122115774E-4 >>END_MODULE >>Kmer Content warn #Sequence Count PValue Obs/Exp Max Max Obs/Exp Position ATACGTC 20 7.856302E-4 44.000004 34 ATACGAG 20 7.856302E-4 44.000004 1 TACGTCA 20 7.856302E-4 44.000004 35 CGTTTTT 16155 0.0 43.428043 1 CGGTCTA 125 0.0 40.48 31 TATAGCG 50 1.3478711E-9 39.600002 1 TATACGG 100 0.0 39.600002 2 GCGATAT 95 0.0 39.36842 9 GTTTTTT 18350 0.0 38.964577 2 TCACGAC 130 0.0 38.92308 25 CGACGGT 130 0.0 38.92308 28 ACGGTCT 130 0.0 38.92308 30 TCGTTGA 210 0.0 38.761906 24 TATGGGC 245 0.0 38.612244 4 ACGTAGG 115 0.0 38.26087 2 TAGGGCG 380 0.0 38.210526 5 TCTAGCG 35 7.289864E-6 37.714287 1 CGTAAGG 160 0.0 37.125004 2 ACACGTG 95 0.0 37.05263 42 CGTTGAT 220 0.0 37.0 25 >>END_MODULE