##FastQC 0.11.5 >>Basic Statistics pass #Measure Value Filename SRR1545967_1.fastq.gz File type Conventional base calls Encoding Illumina 1.5 Total Sequences 441634 Sequences flagged as poor quality 0 Sequence length 50 %GC 43 >>END_MODULE >>Per base sequence quality pass #Base Mean Median Lower Quartile Upper Quartile 10th Percentile 90th Percentile 1 28.941494540728296 31.0 28.0 33.0 23.0 33.0 2 28.71340748221378 31.0 28.0 33.0 16.0 33.0 3 28.12527794508575 31.0 26.0 33.0 16.0 34.0 4 32.000403048678315 35.0 32.0 35.0 25.0 37.0 5 33.61486660900202 35.0 33.0 35.0 28.0 37.0 6 33.49696807763895 35.0 33.0 37.0 28.0 37.0 7 34.32208570898074 35.0 35.0 37.0 31.0 37.0 8 34.78274770511329 35.0 35.0 37.0 32.0 37.0 9 36.65228447085143 39.0 37.0 39.0 32.0 39.0 10 36.42503521015139 39.0 35.0 39.0 32.0 39.0 11 36.42057450286889 39.0 35.0 39.0 32.0 39.0 12 35.19499630916098 37.0 34.0 39.0 30.0 39.0 13 35.12741319735346 37.0 34.0 39.0 27.0 39.0 14 35.78333416358342 38.0 34.0 40.0 27.0 41.0 15 36.39036396654243 38.0 35.0 40.0 31.0 41.0 16 36.06737705883152 37.0 34.0 40.0 31.0 41.0 17 35.665748108161964 37.0 34.0 40.0 30.0 41.0 18 35.31231064637234 37.0 33.0 39.0 29.0 40.0 19 34.73345802180086 36.0 33.0 39.0 27.0 40.0 20 35.18462346649035 35.0 34.0 39.0 30.0 40.0 21 35.290924158918926 35.0 34.0 39.0 30.0 40.0 22 35.66488087420805 36.0 34.0 39.0 31.0 40.0 23 36.025235828763186 36.0 35.0 40.0 31.0 41.0 24 35.63330948251267 35.0 34.0 40.0 31.0 41.0 25 35.28374400521699 35.0 34.0 39.0 30.0 41.0 26 35.42337999338819 35.0 34.0 40.0 30.0 41.0 27 35.747940602399275 36.0 34.0 40.0 31.0 41.0 28 35.68821920413736 36.0 35.0 40.0 31.0 41.0 29 35.833094825126686 36.0 35.0 40.0 31.0 41.0 30 35.487310759588254 36.0 35.0 40.0 30.0 41.0 31 34.781187589723615 35.0 34.0 39.0 29.0 41.0 32 34.723474641898044 35.0 34.0 40.0 27.0 41.0 33 34.413086401862174 35.0 34.0 40.0 24.0 41.0 34 33.955071393959706 35.0 34.0 40.0 21.0 41.0 35 33.61319101337306 35.0 33.0 40.0 18.0 41.0 36 33.19252593776747 35.0 33.0 40.0 18.0 41.0 37 33.097080387832456 35.0 33.0 40.0 16.0 41.0 38 32.93339280943043 35.0 33.0 40.0 15.0 41.0 39 32.72090237617575 35.0 33.0 40.0 15.0 40.0 40 32.52397686772305 35.0 32.0 39.0 15.0 40.0 41 32.20893998197602 35.0 32.0 39.0 12.0 40.0 42 32.39568285050517 35.0 32.0 39.0 12.0 40.0 43 32.19345430831865 35.0 32.0 39.0 12.0 40.0 44 31.926805907153888 35.0 31.0 39.0 10.0 40.0 45 31.90445934869145 35.0 31.0 39.0 10.0 40.0 46 31.750247942866718 35.0 31.0 38.0 10.0 40.0 47 31.736573723943355 35.0 31.0 38.0 10.0 40.0 48 31.746817500464186 35.0 31.0 38.0 10.0 40.0 49 31.805182571994003 35.0 31.0 38.0 10.0 40.0 50 31.872450943541484 35.0 31.0 39.0 10.0 40.0 >>END_MODULE >>Per sequence quality scores pass #Quality Count 10 1.0 11 2.0 12 3.0 13 8.0 14 14.0 15 51.0 16 122.0 17 270.0 18 546.0 19 881.0 20 1421.0 21 1991.0 22 2992.0 23 4247.0 24 6066.0 25 9135.0 26 13030.0 27 14741.0 28 13972.0 29 13761.0 30 14523.0 31 17436.0 32 23622.0 33 36592.0 34 57456.0 35 40728.0 36 39818.0 37 55419.0 38 59810.0 39 12976.0 >>END_MODULE >>Per base sequence content fail #Base G A T C 1 26.86432656905945 21.380600225526113 27.69125565513525 24.06381755027919 2 38.445183115430424 19.762291852529472 29.113926916858755 12.67859811518135 3 27.784545573936793 18.850450825796926 40.51794019482195 12.84706340544433 4 24.247680205781258 24.56332619318259 37.83336427901837 13.355629322017778 5 20.15537752980975 29.18344149227641 37.839704370587405 12.82147660732643 6 18.11364161273815 35.7803067698592 35.74928560753928 10.356766009863371 7 75.35447904826168 4.812355932740686 17.50408709474361 2.3290779242540203 8 76.73050535058442 3.5074292287278603 17.046694774405957 2.715370646281763 9 73.23417128210238 4.564186634181245 18.555636567836714 3.646005515879665 10 46.15201728127816 20.956266954084153 22.933469796256627 9.958245968381057 11 40.43370754969047 18.686514172368977 29.21899129143137 11.66078698650919 12 36.080102528337946 19.15251090269318 31.77585964848721 12.991526920481666 13 20.87678937762944 33.04546298518683 32.9288505866849 13.148897050498828 14 14.783282084259817 34.65471408451342 36.7523786664976 13.809625164729164 15 14.019527482032634 19.932115733842956 52.05668041862719 13.991676365497222 16 16.667195007630752 16.80645059030781 49.11125502112609 17.415099380935345 17 16.60152977352287 17.13522962453072 36.83774347083784 29.425497131108564 18 21.11431637962657 19.888414388384952 40.67621605220613 18.321053179782353 19 26.4255016597454 21.614957181738724 33.543386605197966 18.416154553317906 20 26.914141574244738 21.847276251375575 33.162754679214004 18.07582749516568 21 20.474419994837355 25.284058745477022 35.82763102478523 18.413890234900393 22 20.460834084332273 21.215304981047655 34.614409216681686 23.709451717938386 23 17.49185977528904 25.93799390445482 33.96454983085541 22.605596489400725 24 18.44785501116309 21.106844128848774 43.978045168623794 16.467255691364343 25 16.68032805445233 22.59970926151519 41.108021574425884 19.611941109606597 26 15.710520476231448 28.726954899305763 35.41529864095608 20.147225983506704 27 16.156138340798037 29.030147135410772 36.28389118591413 18.529823337877065 28 14.94404869190325 24.793833808085427 42.9896701793793 17.27244732063202 29 15.771883505346057 21.995362675880934 42.42245841579226 19.81029540298075 30 18.79769220666887 26.127970219684173 37.77290697727077 17.301430596376186 31 26.724391690857136 22.809385146976908 32.86295892073527 17.603264241430686 32 27.1668395096392 22.885239813963597 33.47387202978032 16.474048646616883 33 26.05913493979177 24.26036038891933 31.42647531666493 18.254029354623967 34 19.35222378711784 24.363160445074428 34.437565948273914 21.847049819533822 35 19.532010669468384 25.583401640272264 34.79012032588071 20.094467364378648 36 27.68695345014197 24.091895098656355 30.211215621985627 18.009935829216047 37 19.807804652721483 30.580299524040267 30.749896973512 18.861998849726245 38 21.431094526236656 30.26737071873995 27.752392252408104 20.54914250261529 39 21.520082240044925 28.057848806930625 29.09966171082842 21.322407242196025 40 24.03279638795926 24.43561863443485 29.06773482114149 22.463850156464403 41 18.76644461250719 22.661751586155052 30.237028851945276 28.334774949392482 42 21.646204775900408 23.281042673344896 28.621211229207894 26.451541321546802 43 21.66771580086678 24.155748878030224 29.57177210087991 24.60476322022308 44 19.881847864974166 27.246090654252164 30.580299524040267 22.291761956733403 45 17.62975676691559 32.83329634946585 27.4245189455522 22.11242793806636 46 21.46415357513235 28.62370197946716 29.498408184152485 20.413736261248 47 21.177037999791683 25.623706508103993 30.463234261854836 22.73602123024948 48 21.8257652264092 23.90690028394553 32.852090192331204 21.415244297314064 49 21.253345530461875 22.898372860785173 33.76166690064623 22.086614708106715 50 18.786597046423058 29.014976202013433 30.622868710289513 21.575558041273997 >>END_MODULE >>Per sequence GC content fail #GC Content Count 0 305.0 1 457.5 2 610.0 3 7473.5 4 14337.0 5 9912.5 6 5488.0 7 5557.0 8 5626.0 9 5982.5 10 6339.0 11 6215.0 12 6091.0 13 5865.5 14 5640.0 15 5228.5 16 4817.0 17 4326.5 18 3836.0 19 3637.0 20 3438.0 21 3230.5 22 3023.0 23 2918.5 24 2814.0 25 2845.5 26 2877.0 27 3111.0 28 3345.0 29 3817.0 30 4289.0 31 4893.0 32 5497.0 33 6446.5 34 7396.0 35 8740.0 36 10084.0 37 10843.0 38 11602.0 39 15122.5 40 18643.0 41 25087.0 42 31531.0 43 36596.5 44 41662.0 45 41707.0 46 41752.0 47 39102.5 48 36453.0 49 33715.0 50 30977.0 51 28611.5 52 26246.0 53 23715.0 54 21184.0 55 19474.0 56 17764.0 57 16910.5 58 16057.0 59 14727.0 60 13397.0 61 12179.5 62 10962.0 63 9884.5 64 8807.0 65 7462.0 66 6117.0 67 5153.5 68 4190.0 69 3592.5 70 2995.0 71 2620.5 72 2246.0 73 1811.5 74 1377.0 75 1104.5 76 832.0 77 648.0 78 464.0 79 344.5 80 225.0 81 172.5 82 120.0 83 95.5 84 71.0 85 58.5 86 46.0 87 39.0 88 32.0 89 25.5 90 19.0 91 11.5 92 4.0 93 5.0 94 6.0 95 3.5 96 1.0 97 0.5 98 0.0 99 0.0 100 0.0 >>END_MODULE >>Per base N content pass #Base N-Count 1 0.0 2 0.0 3 0.0 4 0.0 5 0.0 6 0.0 7 0.0 8 0.0 9 0.0 10 0.0 11 0.0 12 0.0 13 0.0 14 0.0 15 0.0 16 0.0 17 0.0 18 0.0 19 0.0 20 0.0 21 0.0 22 0.0 23 0.0 24 0.0 25 0.0 26 0.0 27 0.0 28 0.0 29 0.0 30 0.0 31 0.0 32 0.0 33 0.0 34 0.0 35 0.0 36 0.0 37 0.0 38 0.0 39 0.0 40 0.0 41 0.0 42 0.0 43 0.0 44 0.0 45 0.0 46 0.0 47 0.0 48 0.0 49 0.0 50 0.0 >>END_MODULE >>Sequence Length Distribution pass #Length Count 50 441634.0 >>END_MODULE >>Sequence Duplication Levels fail #Total Deduplicated Percentage 35.803110375518294 #Duplication Level Percentage of deduplicated Percentage of total 1 74.65834551671436 26.730009849885057 2 8.322238681166224 5.959240601464042 3 3.920962042333678 4.211479103396709 4 2.32105830553625 3.324044268045113 5 1.5830382978013577 2.83388474524273 6 1.1493563657195063 2.4690319693596026 7 0.9170443572005372 2.298312823806794 8 0.7665918845175809 2.195709908348762 9 0.6169561557730432 1.988005440779795 >10 5.5016568759105 39.6742022010669 >50 0.22050988615826525 4.901915787912353 >100 0.020970680816203898 1.135551714897682 >500 6.35475176248603E-4 0.1183103369558795 >1k 0.0 0.0 >5k 6.35475176248603E-4 2.160301248838607 >10k+ 0.0 0.0 >>END_MODULE >>Overrepresented sequences fail #Sequence Count Percentage Possible Source CGTTTTTTTTTTTTTTTTTTTTTTTTTTTTTTTTTTTTTTTTTTTTTTTT 9495 2.1499703374287304 No Hit GACCAGAAAAATGGTCCTGCCAAGCGGCTACAGTGTTCTTCTTTCAGATA 520 0.1177445577106835 No Hit >>END_MODULE >>Adapter Content warn #Position Illumina Universal Adapter Illumina Small RNA 3' Adapter Illumina Small RNA 5' Adapter Nextera Transposase Sequence SOLID Small RNA Adapter 1 0.0 0.0 0.0 0.04143702704049054 0.0 2 0.0 0.0 0.0 0.17661683656602525 0.0 3 0.0 0.0 0.0 0.23865916120588543 0.0 4 0.0 0.0 0.0 0.36749887916238333 0.0 5 0.0 0.0 0.0 0.7030708686378313 0.0 6 0.0 0.0 0.0 1.004678081850582 0.0 7 0.0 0.0 0.0 1.2234112409823519 0.0 8 0.0 0.0 0.0 1.823455621623335 0.0 9 0.0 0.0 0.0 2.100155332243441 0.0 10 0.0 0.0 0.0 2.5937767472613067 0.0 11 0.0 0.0 0.0 2.9080641436121315 0.0 12 2.2643184175131443E-4 0.0 0.0 3.2438625649293304 0.0 13 2.2643184175131443E-4 0.0 0.0 3.3826652839228863 0.0 14 2.2643184175131443E-4 0.0 0.0 3.4361031985761965 0.0 15 2.2643184175131443E-4 0.0 0.0 3.5072027968861095 0.0 16 2.2643184175131443E-4 0.0 0.0 3.638759696943623 0.0 17 2.2643184175131443E-4 0.0 0.0 3.800884895637564 0.0 18 2.2643184175131443E-4 0.0 0.0 4.035921147375428 0.0 19 2.2643184175131443E-4 0.0 0.0 4.131022520910981 0.0 20 2.2643184175131443E-4 0.0 0.0 4.24989923783042 0.0 21 2.2643184175131443E-4 0.0 0.0 4.381229706046183 0.0 22 2.2643184175131443E-4 0.0 0.0 4.5107487195279345 0.0 23 2.2643184175131443E-4 0.0 0.0 4.642984915110702 0.0 24 4.5286368350262886E-4 0.0 0.0 4.747143562316307 0.0 25 6.792955252539433E-4 0.0 0.0 4.834546253232315 0.0 26 6.792955252539433E-4 0.0 0.0 4.928062603875607 0.0 27 6.792955252539433E-4 0.0 0.0 5.040825661067762 0.0 28 6.792955252539433E-4 0.0 0.0 5.130266238559531 0.0 29 6.792955252539433E-4 0.0 0.0 5.238953522600162 0.0 30 6.792955252539433E-4 0.0 0.0 5.3861342197385165 0.0 31 6.792955252539433E-4 0.0 0.0 5.507048823233719 0.0 32 6.792955252539433E-4 0.0 0.0 5.610981038597572 0.0 33 6.792955252539433E-4 0.0 0.0 5.724196959473229 0.0 34 6.792955252539433E-4 0.0 0.0 5.839677198766399 0.0 35 6.792955252539433E-4 0.0 0.0 5.980291372493966 0.0 36 6.792955252539433E-4 0.0 0.0 6.0882993610093425 0.0 37 6.792955252539433E-4 0.0 0.0 6.2053646231947726 0.0 38 6.792955252539433E-4 0.0 0.0 6.356847525326401 0.0 >>END_MODULE >>Kmer Content warn #Sequence Count PValue Obs/Exp Max Max Obs/Exp Position CTATGCG 25 4.4383734E-5 44.0 1 TAGACGG 50 2.7284841E-11 44.0 2 ACGTGTT 20 7.8512105E-4 44.0 44 GCGATAC 25 4.4383734E-5 44.0 9 CCGACGG 30 2.5241643E-6 44.0 2 AGTTACG 25 4.4383734E-5 44.0 1 CGGTCTA 50 2.7284841E-11 44.0 31 ACGTAAG 20 7.8512105E-4 44.0 1 GACGCCT 20 7.8512105E-4 44.0 11 AGTACGG 35 1.4433681E-7 44.0 2 CGTTTTT 5825 0.0 43.131332 1 TAACGGG 140 0.0 42.428574 3 GTAGGGT 140 0.0 40.857143 4 TACGGGA 70 0.0 40.857143 4 GTAACGG 65 0.0 40.615387 2 CGACGGT 55 7.8216544E-11 40.0 28 TAGGGTA 165 0.0 40.0 5 GCATAGG 100 0.0 39.600002 2 TAGCGGG 180 0.0 39.11111 3 ATGTACG 45 2.345223E-8 39.11111 1 >>END_MODULE