##FastQC 0.11.5 >>Basic Statistics pass #Measure Value Filename SRR1545957_1.fastq.gz File type Conventional base calls Encoding Illumina 1.5 Total Sequences 1026187 Sequences flagged as poor quality 0 Sequence length 50 %GC 42 >>END_MODULE >>Per base sequence quality pass #Base Mean Median Lower Quartile Upper Quartile 10th Percentile 90th Percentile 1 29.07630578052538 31.0 28.0 33.0 23.0 33.0 2 28.863326079944493 31.0 28.0 33.0 16.0 33.0 3 28.283266110367798 31.0 27.0 33.0 16.0 34.0 4 32.22685826267532 35.0 32.0 35.0 25.0 37.0 5 33.71127874354284 35.0 33.0 35.0 28.0 37.0 6 33.516276273232855 35.0 33.0 37.0 28.0 37.0 7 34.45062059838996 35.0 35.0 37.0 32.0 37.0 8 34.91773624105548 35.0 35.0 37.0 32.0 37.0 9 36.74491393868759 39.0 37.0 39.0 32.0 39.0 10 36.51273500833669 39.0 35.0 39.0 32.0 39.0 11 36.44849330580099 39.0 35.0 39.0 32.0 39.0 12 35.11432614133681 37.0 34.0 39.0 30.0 39.0 13 35.0134488158591 37.0 34.0 39.0 27.0 39.0 14 35.712258097208405 38.0 33.0 40.0 27.0 41.0 15 36.405265317140056 38.0 35.0 40.0 31.0 41.0 16 36.07566262289427 37.0 34.0 40.0 31.0 41.0 17 35.685078840406284 37.0 34.0 40.0 30.0 41.0 18 35.343712208398664 37.0 34.0 39.0 29.0 40.0 19 34.77502346063632 36.0 33.0 39.0 27.0 40.0 20 35.179235363535106 35.0 34.0 39.0 30.0 40.0 21 35.34622831901008 35.0 34.0 39.0 30.0 40.0 22 35.67784331705625 35.0 34.0 39.0 31.0 41.0 23 36.05100727255364 35.0 35.0 40.0 32.0 41.0 24 35.73528898728984 35.0 35.0 40.0 31.0 41.0 25 35.35490315118005 35.0 34.0 39.0 30.0 41.0 26 35.465292388229436 35.0 34.0 40.0 31.0 41.0 27 35.72614348067165 35.0 34.0 40.0 31.0 41.0 28 35.68128810830775 36.0 35.0 40.0 31.0 41.0 29 35.83788432322764 36.0 35.0 40.0 31.0 41.0 30 35.49476362495335 36.0 35.0 40.0 31.0 41.0 31 34.77828797285485 35.0 34.0 39.0 29.0 41.0 32 34.63445064106249 35.0 34.0 40.0 27.0 41.0 33 34.3076661466185 35.0 34.0 40.0 24.0 41.0 34 33.939250838297504 35.0 34.0 40.0 22.0 41.0 35 33.63515421653168 35.0 33.0 40.0 19.0 41.0 36 33.19086287392064 35.0 33.0 40.0 18.0 41.0 37 33.0692125314392 35.0 33.0 40.0 17.0 41.0 38 32.93473411766082 35.0 33.0 40.0 16.0 41.0 39 32.77807748490285 35.0 33.0 39.0 15.0 40.0 40 32.57458046145585 35.0 32.0 39.0 15.0 40.0 41 32.303415459365596 35.0 32.0 39.0 13.0 40.0 42 32.44806843197195 35.0 32.0 39.0 12.0 40.0 43 32.22300126585115 35.0 32.0 39.0 12.0 40.0 44 32.05087571758364 35.0 32.0 39.0 10.0 40.0 45 32.02555674550545 35.0 31.0 39.0 10.0 40.0 46 31.911098074717376 35.0 31.0 38.0 10.0 40.0 47 31.894647856579745 35.0 31.0 38.0 10.0 40.0 48 31.91870195198341 35.0 31.0 38.0 10.0 40.0 49 31.9176280736357 35.0 31.0 38.0 10.0 40.0 50 32.009828617980936 35.0 32.0 39.0 10.0 40.0 >>END_MODULE >>Per sequence quality scores pass #Quality Count 10 2.0 11 6.0 12 3.0 13 14.0 14 38.0 15 119.0 16 246.0 17 607.0 18 1130.0 19 1938.0 20 3189.0 21 4592.0 22 6614.0 23 9566.0 24 13844.0 25 20929.0 26 29675.0 27 34253.0 28 32119.0 29 30476.0 30 32728.0 31 39474.0 32 53810.0 33 85495.0 34 141312.0 35 97036.0 36 87144.0 37 123956.0 38 142481.0 39 33391.0 >>END_MODULE >>Per base sequence content fail #Base G A T C 1 27.258774472878727 22.366781103249213 27.148950434959712 23.22549398891235 2 37.79184495613372 20.022276641586767 29.56683333544471 12.619045066834797 3 27.402023217990486 19.089015939589956 40.58889851459821 12.920062327821341 4 24.06705600441245 25.560351086108085 36.85760977287765 13.514983136601808 5 20.11933497500943 29.48692587218509 37.523765161710294 12.86997399109519 6 18.26947720054922 36.78900629222549 34.740646685253274 10.200869821972018 7 77.27987199214178 4.4317458708792845 16.194514255199103 2.0938678817798313 8 79.00986857171256 2.8327195725535406 15.940174646531286 2.217237209202611 9 75.55016775694878 4.467216988716482 17.136935081032988 2.845680173301747 10 47.87480254573484 21.194090355851323 21.465385938430327 9.465721159983511 11 42.50346184467354 17.83495600704355 28.910422759204707 10.75115938907821 12 38.67384794389327 19.274654619479687 30.071906972121067 11.979590464505982 13 19.772322198585638 36.65949773286935 30.98489846392519 12.58328160461982 14 13.64955899850612 36.974644972115215 35.69290977180572 13.682886257572937 15 12.830994740724645 20.038940271120175 53.714673836250114 13.415391151905062 16 15.006816496408549 16.526325123978378 51.21854009064625 17.24831828896683 17 15.853640710708671 16.81642819486117 36.180442745815334 31.149488348614824 18 20.380398504366163 20.075483318342563 41.2507661858901 18.293351991401178 19 26.39967179471188 21.711832248898105 33.2087621456908 18.67973381069922 20 27.986224732919045 21.40165486407448 33.06697512246794 17.545145280538538 21 19.86372854070457 25.382508256292468 36.043040888259156 18.710722314743805 22 20.443642338092374 21.66846783286087 33.9294884850422 23.958401344004553 23 17.425576430026886 27.251660759686104 33.3085490266394 22.01421378364762 24 17.7512480668728 20.970641803102165 45.727825435325144 15.550284694699895 25 15.803552373982518 22.538679597383325 42.42706251394726 19.230705514686893 26 14.785414354303844 31.063636549673696 35.36421724305609 18.78673185296637 27 15.950406699753552 30.0705426983581 36.363157981927266 17.61589261996108 28 13.519075957890717 25.692490744864237 44.50952896499371 16.278904332251333 29 14.448048942346764 22.19098468407805 43.94929968904303 19.411666684532154 30 17.85425073597697 26.923942712195732 37.854991341734014 17.366815210093286 31 26.377843414504376 23.458882250506 32.951304196993334 17.21197013799629 32 27.54117914181333 23.565295604017592 33.00743431752692 15.886090936642153 33 26.02235265112499 24.9121261524459 31.367869598815812 17.6976515976133 34 17.786621736584074 25.127876303246875 34.51339765559299 22.572104304576065 35 18.854458300485195 25.213143413432444 35.80916538603588 20.123232900046485 36 28.95856213341233 23.708057108499716 29.57326491175585 17.7601158463321 37 18.93348873061148 31.235145251304097 31.77335125079542 18.058014767289002 38 20.130444061365033 30.51383422319714 28.58377664109953 20.7719450743383 39 20.170008000491137 29.53837848267421 30.010806997165236 20.28080651966942 40 23.917862923619186 24.745977097741445 28.46976233376568 22.866397644873693 41 17.391274689700804 23.525829113017412 30.482553374774774 28.60034282250701 42 21.292707859288804 23.612168152588172 28.14730648507533 26.947817503047688 43 21.39337177337074 24.574078603607337 29.17002456667255 24.86252505634938 44 18.933001489981844 28.28597516826855 30.69957035121279 22.081452990536814 45 16.817987364875993 34.702349571764216 25.99009732144336 22.489565741916433 46 20.55775409355215 30.088083361024843 28.883527076449028 20.470635468973978 47 20.398036615158833 25.40716263215184 30.789514971442827 23.405285781246498 48 21.81795325803192 22.622582433805924 33.750476277715464 21.808988030446695 49 20.76210281361974 23.14461204439347 33.78380353678228 22.30948160520451 50 18.55285635074309 30.7162339807462 29.894161590431374 20.83674807807934 >>END_MODULE >>Per sequence GC content fail #GC Content Count 0 464.0 1 813.5 2 1163.0 3 14652.5 4 28142.0 5 19949.5 6 11757.0 7 12254.0 8 12751.0 9 13575.5 10 14400.0 11 14442.0 12 14484.0 13 13759.5 14 13035.0 15 12170.5 16 11306.0 17 10523.5 18 9741.0 19 8926.5 20 8112.0 21 7490.0 22 6868.0 23 7164.0 24 7460.0 25 7129.0 26 6798.0 27 7750.5 28 8703.0 29 9909.0 30 11115.0 31 13387.0 32 15659.0 33 17768.5 34 19878.0 35 21961.5 36 24045.0 37 26821.5 38 29598.0 39 37738.0 40 45878.0 41 60144.0 42 74410.0 43 89246.0 44 104082.0 45 103826.5 46 103571.0 47 95443.5 48 87316.0 49 79751.5 50 72187.0 51 67577.0 52 62967.0 53 57067.5 54 51168.0 55 45519.0 56 39870.0 57 36289.0 58 32708.0 59 30135.0 60 27562.0 61 24390.5 62 21219.0 63 18789.0 64 16359.0 65 13454.5 66 10550.0 67 8767.0 68 6984.0 69 5913.5 70 4843.0 71 4172.5 72 3502.0 73 2981.5 74 2461.0 75 1914.0 76 1367.0 77 1017.0 78 667.0 79 532.5 80 398.0 81 349.0 82 300.0 83 227.0 84 154.0 85 126.0 86 98.0 87 74.5 88 51.0 89 33.5 90 16.0 91 12.5 92 9.0 93 8.0 94 7.0 95 4.5 96 2.0 97 2.0 98 2.0 99 1.0 100 0.0 >>END_MODULE >>Per base N content pass #Base N-Count 1 0.0 2 0.0 3 0.0 4 0.0 5 0.0 6 0.0 7 0.0 8 0.0 9 0.0 10 0.0 11 0.0 12 0.0 13 0.0 14 0.0 15 0.0 16 0.0 17 0.0 18 0.0 19 0.0 20 0.0 21 0.0 22 0.0 23 0.0 24 0.0 25 0.0 26 0.0 27 0.0 28 0.0 29 0.0 30 0.0 31 0.0 32 0.0 33 0.0 34 0.0 35 0.0 36 0.0 37 0.0 38 0.0 39 0.0 40 0.0 41 0.0 42 0.0 43 0.0 44 0.0 45 0.0 46 0.0 47 0.0 48 0.0 49 0.0 50 0.0 >>END_MODULE >>Sequence Length Distribution pass #Length Count 50 1026187.0 >>END_MODULE >>Sequence Duplication Levels fail #Total Deduplicated Percentage 27.139654199470865 #Duplication Level Percentage of deduplicated Percentage of total 1 77.53999315148421 21.044086007606204 2 7.207693460931748 3.9122861621094995 3 3.0701797127157735 2.4997084720001066 4 1.9315946080552564 2.0969123886472847 5 1.2696402795213446 1.722879907196441 6 0.9676281352864058 1.5756655791211118 7 0.7632735888024427 1.4500486881781187 8 0.5846123158818639 1.269294087502849 9 0.4789526131365541 1.169874746861312 >10 4.77368607708972 29.19588681692223 >50 1.0912245483576581 20.736597823375114 >100 0.32079979940199765 11.438871936619869 >500 0.0 0.0 >1k 3.608546674938079E-4 0.1326035958783162 >5k 0.0 0.0 >10k+ 3.608546674938079E-4 1.7552837879815812 >>END_MODULE >>Overrepresented sequences fail #Sequence Count Percentage Possible Source CGTTTTTTTTTTTTTTTTTTTTTTTTTTTTTTTTTTTTTTTTTTTTTTTT 17923 1.7465627609782621 No Hit GACCAGAAAAATGGTCCTGCCAAGCGGCTACAGTGTTCTTCTTTCAGATA 1354 0.1319447625042999 No Hit >>END_MODULE >>Adapter Content pass #Position Illumina Universal Adapter Illumina Small RNA 3' Adapter Illumina Small RNA 5' Adapter Nextera Transposase Sequence SOLID Small RNA Adapter 1 0.0 0.0 0.0 0.03907669849647286 9.744812592636625E-5 2 0.0 0.0 0.0 0.1151836848449649 9.744812592636625E-5 3 0.0 0.0 0.0 0.15406548708958503 9.744812592636625E-5 4 0.0 0.0 0.0 0.23338826159364717 9.744812592636625E-5 5 0.0 0.0 0.0 0.39827049066105885 9.744812592636625E-5 6 0.0 0.0 0.0 0.5976493563064041 9.744812592636625E-5 7 0.0 0.0 0.0 0.7396312757811199 9.744812592636625E-5 8 0.0 0.0 0.0 1.166161722960825 9.744812592636625E-5 9 0.0 0.0 0.0 1.3720696130432368 9.744812592636625E-5 10 0.0 0.0 0.0 1.6941356692298772 9.744812592636625E-5 11 0.0 0.0 0.0 1.9237234539123962 9.744812592636625E-5 12 0.0 0.0 0.0 2.145320492268953 9.744812592636625E-5 13 9.744812592636625E-5 0.0 0.0 2.2385783487804853 9.744812592636625E-5 14 9.744812592636625E-5 0.0 0.0 2.272587744728787 9.744812592636625E-5 15 9.744812592636625E-5 0.0 0.0 2.3192653970475168 9.744812592636625E-5 16 9.744812592636625E-5 0.0 0.0 2.410379394788669 9.744812592636625E-5 17 9.744812592636625E-5 0.0 0.0 2.5328716890781116 9.744812592636625E-5 18 9.744812592636625E-5 0.0 0.0 2.716561406449312 9.744812592636625E-5 19 9.744812592636625E-5 0.0 0.0 2.7952020440718894 9.744812592636625E-5 20 9.744812592636625E-5 0.0 0.0 2.8790074323685646 9.744812592636625E-5 21 1.948962518527325E-4 0.0 0.0 2.9815228608431017 9.744812592636625E-5 22 1.948962518527325E-4 0.0 0.0 3.0881311106065463 9.744812592636625E-5 23 1.948962518527325E-4 0.0 0.0 3.204289276710775 9.744812592636625E-5 24 1.948962518527325E-4 0.0 0.0 3.2962803075852647 9.744812592636625E-5 25 3.89792503705465E-4 0.0 0.0 3.365565925118911 9.744812592636625E-5 26 3.89792503705465E-4 0.0 0.0 3.4433295296081514 9.744812592636625E-5 27 3.89792503705465E-4 0.0 0.0 3.5327869092085558 9.744812592636625E-5 28 3.89792503705465E-4 0.0 0.0 3.6187361562756104 9.744812592636625E-5 29 3.89792503705465E-4 0.0 0.0 3.7057573327278557 9.744812592636625E-5 30 3.89792503705465E-4 0.0 0.0 3.8341939626988064 9.744812592636625E-5 31 3.89792503705465E-4 0.0 0.0 3.9422639343511463 9.744812592636625E-5 32 3.89792503705465E-4 0.0 0.0 4.0363988239960165 9.744812592636625E-5 33 3.89792503705465E-4 0.0 0.0 4.133749501796456 9.744812592636625E-5 34 3.89792503705465E-4 0.0 0.0 4.2349006565080245 9.744812592636625E-5 35 3.89792503705465E-4 0.0 0.0 4.367137763390104 9.744812592636625E-5 36 4.872406296318312E-4 0.0 0.0 4.469555743738714 9.744812592636625E-5 37 5.846887555581975E-4 0.0 0.0 4.5839598435762685 9.744812592636625E-5 38 5.846887555581975E-4 0.0 0.0 4.718048464850948 9.744812592636625E-5 >>END_MODULE >>Kmer Content warn #Sequence Count PValue Obs/Exp Max Max Obs/Exp Position GAGTACG 20 7.8560854E-4 44.000004 1 TCTAGCG 20 7.8560854E-4 44.000004 1 ACGCTTA 20 7.8560854E-4 44.000004 42 GCGTAAG 95 0.0 44.000004 1 AGCTTCG 30 2.5274512E-6 44.0 1 ATGTCGA 25 4.442506E-5 44.0 38 ACGGGTA 30 2.5274512E-6 44.0 5 TACGATG 30 2.5274512E-6 44.0 1 ATATACG 30 2.5274512E-6 44.0 1 CGGCATA 35 1.4458783E-7 43.999996 34 TATTACG 35 1.4458783E-7 43.999996 1 CGCACGG 35 1.4458783E-7 43.999996 2 CGTTTTT 13015 0.0 43.070305 1 TTAACGG 150 0.0 42.533333 2 CGTAAGG 145 0.0 42.482758 2 TACGGGT 95 0.0 41.68421 4 GCGTTAG 85 0.0 41.411762 1 ACGGGAT 240 0.0 41.25 5 ATGGGCG 255 0.0 40.549015 5 TATACGG 60 3.6379788E-12 40.333332 2 >>END_MODULE