##FastQC 0.11.5 >>Basic Statistics pass #Measure Value Filename SRR1545955_1.fastq.gz File type Conventional base calls Encoding Illumina 1.5 Total Sequences 1009962 Sequences flagged as poor quality 0 Sequence length 50 %GC 42 >>END_MODULE >>Per base sequence quality pass #Base Mean Median Lower Quartile Upper Quartile 10th Percentile 90th Percentile 1 28.94006210134639 31.0 28.0 33.0 23.0 33.0 2 28.720780583823945 31.0 28.0 33.0 16.0 33.0 3 28.162290264386186 31.0 26.0 33.0 16.0 34.0 4 32.09522536491472 35.0 32.0 35.0 25.0 37.0 5 33.675717502242655 35.0 33.0 35.0 28.0 37.0 6 33.523932583602154 35.0 33.0 37.0 28.0 37.0 7 34.435694610292266 35.0 35.0 37.0 32.0 37.0 8 34.93274796477491 35.0 35.0 37.0 32.0 37.0 9 36.85614409255002 39.0 37.0 39.0 32.0 39.0 10 36.58501805018407 39.0 35.0 39.0 32.0 39.0 11 36.50445165263643 39.0 35.0 39.0 32.0 39.0 12 35.22515797624069 37.0 34.0 39.0 30.0 39.0 13 35.111980450749634 37.0 34.0 39.0 27.0 39.0 14 35.79431701390745 38.0 34.0 40.0 27.0 41.0 15 36.42763688138761 38.0 35.0 40.0 31.0 41.0 16 36.07498995011694 37.0 34.0 40.0 31.0 41.0 17 35.70419976197124 37.0 34.0 40.0 30.0 41.0 18 35.35651539364847 37.0 34.0 39.0 29.0 40.0 19 34.74521615664748 36.0 33.0 39.0 27.0 40.0 20 35.24256853228141 35.0 34.0 39.0 30.0 40.0 21 35.335048249340076 35.0 34.0 39.0 30.0 40.0 22 35.680122618474755 35.0 34.0 39.0 31.0 41.0 23 36.06086565633162 35.0 35.0 40.0 32.0 41.0 24 35.65799505327923 35.0 34.0 40.0 31.0 41.0 25 35.300470710779216 35.0 34.0 39.0 30.0 41.0 26 35.44963473873275 35.0 34.0 39.0 31.0 41.0 27 35.750014356975804 35.0 35.0 40.0 31.0 41.0 28 35.712617900475465 36.0 35.0 40.0 31.0 41.0 29 35.86273939019488 36.0 35.0 40.0 31.0 41.0 30 35.53686673359988 36.0 35.0 40.0 31.0 41.0 31 34.79503981337912 35.0 34.0 39.0 29.0 41.0 32 34.70587408239122 35.0 34.0 40.0 28.0 41.0 33 34.4056677379941 35.0 34.0 40.0 25.0 41.0 34 33.98415286911785 35.0 34.0 40.0 22.0 41.0 35 33.67687794194237 35.0 33.0 40.0 20.0 41.0 36 33.26375645816377 35.0 33.0 40.0 18.0 41.0 37 33.17231242363574 35.0 33.0 40.0 18.0 41.0 38 33.04514031220977 35.0 33.0 40.0 17.0 41.0 39 32.82842126733481 35.0 33.0 40.0 15.0 41.0 40 32.64302023244439 35.0 32.0 39.0 15.0 40.0 41 32.34538230151234 35.0 32.0 39.0 14.0 40.0 42 32.53223883670871 35.0 32.0 39.0 13.0 40.0 43 32.318303064867784 35.0 32.0 39.0 12.0 40.0 44 32.1467084900224 35.0 32.0 39.0 10.0 40.0 45 32.11934112372545 35.0 32.0 39.0 10.0 40.0 46 31.990304585717087 35.0 31.0 39.0 10.0 40.0 47 31.996820672460945 35.0 32.0 38.0 10.0 40.0 48 32.00185947590107 35.0 32.0 38.0 10.0 40.0 49 32.0641529087233 35.0 32.0 38.0 10.0 40.0 50 32.11260423659504 35.0 32.0 39.0 10.0 40.0 >>END_MODULE >>Per sequence quality scores pass #Quality Count 7 1.0 8 0.0 9 1.0 10 0.0 11 4.0 12 8.0 13 15.0 14 32.0 15 107.0 16 242.0 17 529.0 18 1014.0 19 1915.0 20 2970.0 21 4397.0 22 6523.0 23 9059.0 24 13533.0 25 20469.0 26 29138.0 27 33399.0 28 31108.0 29 29919.0 30 31844.0 31 38906.0 32 52333.0 33 84548.0 34 139253.0 35 94149.0 36 85855.0 37 122656.0 38 142523.0 39 33512.0 >>END_MODULE >>Per base sequence content fail #Base G A T C 1 27.386574940443303 22.23539103451417 27.086959707394932 23.291074317647595 2 37.8753854105402 19.97154348381424 29.51903140910252 12.63403969654304 3 27.38736704945335 19.103292995182 40.55023852382565 12.959101431539008 4 23.947930714224892 25.644034131977243 36.87010006317069 13.537935090627172 5 20.18323461674796 29.501704024507852 37.504183325709285 12.810878033034905 6 18.209397977349642 36.970202839314744 34.73605937649139 10.084339806844218 7 77.28855145045061 4.42303769844806 16.15595438244211 2.132456468659217 8 79.08446060346826 2.820898212011937 15.922183210853477 2.172457973666336 9 75.70997720706323 4.444127600840428 17.102326622189747 2.7435685699065906 10 47.776252967933445 21.220699392650417 21.488333224418344 9.514714414997792 11 42.42832898663514 17.831561979559627 28.994358203575977 10.745750830229255 12 38.6275919292013 19.30023109780368 30.041229273972686 12.030947699022338 13 19.730940372013997 36.57900000198027 31.041167885524406 12.648891740481325 14 13.73893275192532 36.864258259221636 35.689857638208174 13.706951350644875 15 12.873652672080732 20.090458848946792 53.66360318507033 13.372285293902147 16 15.075022624613599 16.497551393022707 51.14439949225812 17.28302649010557 17 15.827130129648442 16.923012945041496 36.1322505203166 31.117606404993452 18 20.223236121755075 20.198482715191265 41.2372940764108 18.340987086642862 19 26.35604111837871 21.693192417140448 33.20590279634283 18.74486366813801 20 27.969567171834186 21.313970228582857 33.06797681496928 17.64848578461368 21 19.97599909699573 25.347785362221547 36.03204873054629 18.644166810236428 22 20.431560791396112 21.724678750289613 33.92088019153196 23.922880266782315 23 17.41520968115632 27.25280753137247 33.32689744762674 22.00508533984447 24 17.689774466762113 20.967125495810734 45.69399640778564 15.64910362964151 25 15.777920357399585 22.586196312336504 42.46575613735962 19.17012719290429 26 14.814418760309794 30.985423213942703 35.414203702713564 18.785954323033934 27 15.873072452230877 30.115588507290376 36.2869098045273 17.72442923595145 28 13.535756790849558 25.72987894594054 44.49682265273347 16.237541610476434 29 14.418562282541322 22.095385766989253 43.948188149653156 19.537863800816268 30 17.778688703139327 26.992995776078704 37.885781841297 17.34253367948497 31 26.31524750436155 23.420683154415713 32.94143740061507 17.322631940607668 32 27.462914446286096 23.578015806535298 33.0486691578495 15.910400589329104 33 26.00711709945523 24.91875931965757 31.387418536539 17.6867050443482 34 17.81175925430858 25.214513021281988 34.47307918515746 22.500648539251973 35 18.788132622811553 25.162926922003003 35.89105332675883 20.157887128426612 36 28.933959891560278 23.713565460878726 29.642204360164047 17.710270287396952 37 18.96972361336367 31.173648117453922 31.8584263566352 17.998201912547206 38 20.224028230765118 30.419659353520235 28.69404987514382 20.662262540570833 39 20.183927712131744 29.600717650763098 30.007960695550924 20.207393941554237 40 23.933771765670393 24.814002903079523 28.45077339543468 22.801451935815408 41 17.44540883716417 23.55732195864795 30.479760624657164 28.517508579530716 42 21.151785908776766 23.770498295975493 28.25858794687325 26.819127848374492 43 21.383378780587783 24.681720698402515 29.09980771553781 24.835092805471888 44 19.022299848905206 28.258686960499503 30.752939219495385 21.966073971099902 45 16.74033280460057 34.720217196290555 26.173658018816546 22.365791980292325 46 20.615825149857123 30.10836051257374 29.0221810325537 20.253633305015438 47 20.504929888451247 25.448482220123132 30.79749535131025 23.24909254011537 48 21.83557401169549 22.673427317067375 33.78493448268351 21.70606418855363 49 20.865636528899106 23.171564870757514 33.874541814444505 22.088256785898874 50 18.639216128923664 30.80145589636046 29.87270808208626 20.686619892629622 >>END_MODULE >>Per sequence GC content fail #GC Content Count 0 462.0 1 807.5 2 1153.0 3 14714.0 4 28275.0 5 20134.0 6 11993.0 7 12402.0 8 12811.0 9 13652.5 10 14494.0 11 14299.5 12 14105.0 13 13382.5 14 12660.0 15 11677.0 16 10694.0 17 9959.5 18 9225.0 19 8521.5 20 7818.0 21 7291.5 22 6765.0 23 6938.5 24 7112.0 25 6810.0 26 6508.0 27 7481.5 28 8455.0 29 9722.0 30 10989.0 31 13295.5 32 15602.0 33 17654.5 34 19707.0 35 21742.5 36 23778.0 37 26476.0 38 29174.0 39 37253.5 40 45333.0 41 59349.0 42 73365.0 43 88296.0 44 103227.0 45 102138.5 46 101050.0 47 93246.0 48 85442.0 49 78068.5 50 70695.0 51 66416.5 52 62138.0 53 56123.5 54 50109.0 55 44836.0 56 39563.0 57 35902.0 58 32241.0 59 29653.5 60 27066.0 61 23935.0 62 20804.0 63 18516.0 64 16228.0 65 13335.5 66 10443.0 67 8635.5 68 6828.0 69 5748.0 70 4668.0 71 4113.5 72 3559.0 73 2970.5 74 2382.0 75 1839.5 76 1297.0 77 999.5 78 702.0 79 559.5 80 417.0 81 356.5 82 296.0 83 225.0 84 154.0 85 126.5 86 99.0 87 69.0 88 39.0 89 26.0 90 13.0 91 11.0 92 9.0 93 8.0 94 7.0 95 5.0 96 3.0 97 4.0 98 5.0 99 2.5 100 0.0 >>END_MODULE >>Per base N content pass #Base N-Count 1 0.0 2 0.0 3 0.0 4 0.0 5 0.0 6 0.0 7 0.0 8 0.0 9 0.0 10 0.0 11 0.0 12 0.0 13 0.0 14 0.0 15 0.0 16 0.0 17 0.0 18 0.0 19 0.0 20 0.0 21 0.0 22 0.0 23 0.0 24 0.0 25 0.0 26 0.0 27 0.0 28 0.0 29 0.0 30 0.0 31 0.0 32 0.0 33 0.0 34 0.0 35 0.0 36 0.0 37 0.0 38 0.0 39 0.0 40 0.0 41 0.0 42 0.0 43 0.0 44 0.0 45 0.0 46 0.0 47 0.0 48 0.0 49 0.0 50 0.0 >>END_MODULE >>Sequence Length Distribution pass #Length Count 50 1009962.0 >>END_MODULE >>Sequence Duplication Levels fail #Total Deduplicated Percentage 26.64754760064066 #Duplication Level Percentage of deduplicated Percentage of total 1 76.975134053728 20.511985487624123 2 7.324759240811061 3.903737410654905 3 3.2190661162624763 2.573406526881413 4 1.8940391929899234 2.01885998210712 5 1.382146035791596 1.8415401139896668 6 1.0251775693180338 1.6391080846506836 7 0.772577494437873 1.4411106890751841 8 0.5923090893125866 1.2626867721399415 9 0.4767480193301293 1.1433748984749694 >10 4.894999109728474 29.700045606897802 >50 1.1236144181055725 20.947137332222496 >100 0.31868158135483665 11.082367148885753 >500 0.0 0.0 >1k 3.7403941473572303E-4 0.13993995284595076 >5k 0.0 0.0 >10k+ 3.7403941473572303E-4 1.7946999935499925 >>END_MODULE >>Overrepresented sequences fail #Sequence Count Percentage Possible Source CGTTTTTTTTTTTTTTTTTTTTTTTTTTTTTTTTTTTTTTTTTTTTTTTT 18006 1.782839354351946 No Hit GACCAGAAAAATGGTCCTGCCAAGCGGCTACAGTGTTCTTCTTTCAGATA 1404 0.1390151312623643 No Hit >>END_MODULE >>Adapter Content pass #Position Illumina Universal Adapter Illumina Small RNA 3' Adapter Illumina Small RNA 5' Adapter Nextera Transposase Sequence SOLID Small RNA Adapter 1 0.0 0.0 0.0 0.03604095995690927 0.0 2 0.0 0.0 0.0 0.11148934316340615 0.0 3 0.0 0.0 0.0 0.15327309344311965 0.0 4 0.0 0.0 0.0 0.2302066810434452 0.0 5 9.901362625524525E-5 0.0 0.0 0.3846679380016278 0.0 6 9.901362625524525E-5 0.0 0.0 0.5752691685429748 0.0 7 9.901362625524525E-5 0.0 0.0 0.7176507630980176 0.0 8 9.901362625524525E-5 0.0 0.0 1.1242007125020546 0.0 9 1.980272525104905E-4 0.0 0.0 1.3253964010527128 0.0 10 2.9704087876573573E-4 0.0 0.0 1.6416459233119662 0.0 11 2.9704087876573573E-4 0.0 0.0 1.864822636891289 0.0 12 2.9704087876573573E-4 0.0 0.0 2.0842368326729126 0.0 13 2.9704087876573573E-4 0.0 0.0 2.1722599464138255 0.0 14 2.9704087876573573E-4 0.0 0.0 2.2071127428556716 0.0 15 2.9704087876573573E-4 0.0 0.0 2.252262956428064 0.0 16 2.9704087876573573E-4 0.0 0.0 2.339989029290211 0.0 17 2.9704087876573573E-4 0.0 0.0 2.450983304322341 0.0 18 2.9704087876573573E-4 0.0 0.0 2.631881199490674 0.0 19 2.9704087876573573E-4 0.0 0.0 2.7064384600608737 0.0 20 2.9704087876573573E-4 0.0 0.0 2.7910951105091084 0.0 21 2.9704087876573573E-4 0.0 0.0 2.890207750390609 0.0 22 2.9704087876573573E-4 0.0 0.0 2.9908055946659378 0.0 23 2.9704087876573573E-4 0.0 0.0 3.1004136789304946 0.0 24 2.9704087876573573E-4 0.0 0.0 3.182594988722348 0.0 25 2.9704087876573573E-4 0.0 0.0 3.25002326820217 0.0 26 2.9704087876573573E-4 0.0 0.0 3.323194338004796 0.0 27 2.9704087876573573E-4 0.0 0.0 3.4073559203217547 0.0 28 2.9704087876573573E-4 0.0 0.0 3.4817151536394437 0.0 29 3.96054505020981E-4 0.0 0.0 3.564787586067595 0.0 30 3.96054505020981E-4 0.0 0.0 3.6902378505329905 0.0 31 3.96054505020981E-4 0.0 0.0 3.792122871949638 0.0 32 4.950681312762262E-4 0.0 0.0 3.8777696586604247 0.0 33 5.940817575314715E-4 0.0 0.0 3.9692582493202715 0.0 34 5.940817575314715E-4 0.0 0.0 4.069162998211814 0.0 35 5.940817575314715E-4 0.0 0.0 4.197187616959846 0.0 36 5.940817575314715E-4 0.0 0.0 4.292240698164881 0.0 37 5.940817575314715E-4 0.0 0.0 4.402739905065735 0.0 38 6.930953837867167E-4 0.0 0.0 4.534923096116487 0.0 >>END_MODULE >>Kmer Content warn #Sequence Count PValue Obs/Exp Max Max Obs/Exp Position TTGATCG 20 7.8560266E-4 44.000004 20 CTATGCG 20 7.8560266E-4 44.000004 1 ACGTTAG 20 7.8560266E-4 44.000004 1 ACGTTAC 20 7.8560266E-4 44.000004 18 ATCGTAA 20 7.8560266E-4 44.000004 23 CTAACGG 20 7.8560266E-4 44.000004 2 TCCACGC 20 7.8560266E-4 44.000004 37 GCGATAT 30 2.5274094E-6 44.000004 9 CAATCGT 20 7.8560266E-4 44.000004 24 CCACGAA 20 7.8560266E-4 44.000004 28 CGCTTAT 20 7.8560266E-4 44.000004 38 CGAACCG 25 4.4424545E-5 44.0 26 GAGTACG 45 4.802132E-10 44.0 1 TACGGGA 205 0.0 44.0 4 TGTTACG 25 4.4424545E-5 44.0 1 CACTTCG 25 4.4424545E-5 44.0 28 ACGAACT 25 4.4424545E-5 44.0 1 ATATACG 35 1.4458601E-7 43.999996 1 TATTACG 35 1.4458601E-7 43.999996 1 CGTTTTT 12900 0.0 43.283722 1 >>END_MODULE