##FastQC 0.11.5 >>Basic Statistics pass #Measure Value Filename SRR1545952_1.fastq.gz File type Conventional base calls Encoding Illumina 1.5 Total Sequences 1029502 Sequences flagged as poor quality 0 Sequence length 50 %GC 45 >>END_MODULE >>Per base sequence quality pass #Base Mean Median Lower Quartile Upper Quartile 10th Percentile 90th Percentile 1 31.555947438664518 31.0 31.0 33.0 30.0 34.0 2 31.949843710842718 31.0 31.0 34.0 30.0 34.0 3 31.995356978422578 33.0 31.0 34.0 30.0 34.0 4 35.751739190404685 37.0 35.0 37.0 35.0 37.0 5 35.68032116499045 37.0 35.0 37.0 33.0 37.0 6 35.74332638499003 37.0 35.0 37.0 33.0 37.0 7 36.005437580500086 37.0 35.0 37.0 35.0 37.0 8 36.00535695899571 37.0 35.0 37.0 35.0 37.0 9 37.852497615351886 39.0 38.0 39.0 35.0 39.0 10 37.36354373279508 39.0 37.0 39.0 35.0 39.0 11 36.93946004961622 39.0 35.0 39.0 33.0 39.0 12 35.58935582446659 35.0 35.0 39.0 32.0 39.0 13 35.00429139525713 35.0 35.0 39.0 30.0 39.0 14 35.853963372582086 36.0 35.0 40.0 31.0 41.0 15 36.24132833156225 36.0 35.0 40.0 31.0 41.0 16 36.54291880928837 36.0 35.0 41.0 32.0 41.0 17 36.49849053231562 36.0 35.0 40.0 32.0 41.0 18 36.44338233437138 36.0 35.0 40.0 32.0 41.0 19 36.24070472908261 36.0 35.0 40.0 32.0 41.0 20 35.968607151807376 35.0 35.0 40.0 32.0 41.0 21 35.76571002290428 35.0 35.0 40.0 31.0 41.0 22 35.6437889387296 35.0 35.0 40.0 31.0 41.0 23 35.662424162361994 35.0 35.0 40.0 31.0 41.0 24 35.677320685146796 35.0 35.0 40.0 31.0 41.0 25 35.635893859361126 35.0 35.0 40.0 31.0 41.0 26 35.397913748589126 35.0 35.0 40.0 31.0 41.0 27 35.34767100986691 35.0 34.0 40.0 31.0 41.0 28 35.39546402046815 35.0 35.0 40.0 31.0 41.0 29 35.42201180765069 35.0 35.0 40.0 31.0 41.0 30 35.31912808328687 36.0 35.0 40.0 30.0 41.0 31 34.988404102177554 35.0 34.0 40.0 30.0 41.0 32 34.668697098208646 35.0 34.0 40.0 29.0 41.0 33 34.3435136600026 35.0 34.0 40.0 27.0 41.0 34 34.11174723312825 35.0 34.0 40.0 24.0 41.0 35 33.87005659046801 35.0 33.0 40.0 23.0 41.0 36 33.60635142039549 35.0 33.0 40.0 22.0 41.0 37 33.489513376370326 35.0 33.0 39.0 22.0 41.0 38 33.48633416933624 35.0 33.0 39.0 23.0 41.0 39 33.45165720901951 35.0 33.0 39.0 23.0 41.0 40 33.22369941971944 35.0 33.0 39.0 21.0 41.0 41 33.2698236623144 35.0 33.0 39.0 21.0 41.0 42 33.21148963285161 35.0 33.0 39.0 21.0 41.0 43 33.121829777892614 35.0 33.0 39.0 21.0 41.0 44 32.99210589197496 35.0 33.0 39.0 20.0 41.0 45 32.86773993639643 35.0 33.0 38.0 20.0 41.0 46 32.870260572587526 35.0 33.0 38.0 20.0 41.0 47 32.841155238163694 35.0 33.0 38.0 20.0 41.0 48 32.806760938783995 35.0 33.0 38.0 20.0 41.0 49 32.822763821731286 35.0 33.0 38.0 20.0 41.0 50 32.59035242282191 35.0 32.0 38.0 18.0 40.0 >>END_MODULE >>Per sequence quality scores pass #Quality Count 9 1.0 10 1.0 11 0.0 12 1.0 13 1.0 14 11.0 15 42.0 16 79.0 17 197.0 18 494.0 19 1072.0 20 1873.0 21 3051.0 22 4758.0 23 6907.0 24 10169.0 25 15411.0 26 22557.0 27 27229.0 28 27831.0 29 26852.0 30 28990.0 31 33504.0 32 41790.0 33 56685.0 34 116943.0 35 226357.0 36 52063.0 37 62515.0 38 94903.0 39 167215.0 >>END_MODULE >>Per base sequence content fail #Base G A T C 1 31.523882420820943 22.5608109551997 28.872600538901334 17.042706085078027 2 33.47705978230251 23.660177445017105 30.53320926039969 12.329553512280695 3 26.56789399146383 23.537691038968354 37.001288001383195 12.893126968184617 4 23.881060940143875 25.86920666497005 35.61168409580554 14.638048299080525 5 22.273681838403423 30.979347296071303 34.22994807198043 12.517022793544841 6 19.760524991695014 40.323088250435646 29.830927963228827 10.085458794640516 7 84.89959223002967 4.052056236899006 9.823778875611703 1.224572657459626 8 87.87753690619347 1.7682335731256473 9.36005952392516 0.9941699967557129 9 85.8454864585013 2.7405483427909805 10.060300999900923 1.3536641988068017 10 61.89720855326167 16.792390884136214 13.936641210993276 7.373759351608836 11 57.230097658868075 14.31808777447737 18.76586932322618 9.685945243428376 12 50.398639342128526 18.17247562413672 21.40996326379162 10.018921769943137 13 19.64765488556603 47.947745609042045 22.31982065114978 10.084778854242147 14 12.205318688064715 48.17785686671808 27.999362798712387 11.617461646504815 15 10.273219478932532 19.428616942949116 58.88788948443033 11.410274093688017 16 11.647573292718228 12.585793908122566 57.218830075123705 18.547802724035506 17 12.461559083906588 14.263886811293228 30.488527462792693 42.7860266420075 18 20.131092508805228 20.396172129825878 39.427023939730084 20.045711421638813 19 29.796153868569462 20.156056034859574 28.23918749065082 21.808602605920143 20 33.41586514644945 18.99568917787435 26.739044703167163 20.849400972509038 21 20.279805187362435 28.44074125159543 31.151663619886122 20.127789941156017 22 21.8149163381907 21.87513963061752 27.26968961692158 29.0402544142702 23 17.471942745133084 30.18546831380609 26.001309370938568 26.341279570122257 24 17.979761088370882 20.183545053822137 46.16717597440316 15.669517883403822 25 14.510899444585828 21.452799508888766 43.14299535115036 20.893305695375044 26 14.181808291776024 35.71853187269184 29.995570673976353 20.104089161555784 27 15.296230604700137 35.99147937546503 31.182843743868393 17.529446275966436 28 11.734217126338754 27.379354289743972 45.81739520661446 15.069033377302812 29 12.704200671781113 21.401706844668585 43.66926921948671 22.224823264063595 30 16.39200312384046 30.732820334491823 34.89832948357555 17.976847058092165 31 30.893383402849146 24.60374044926576 26.43889958445928 18.06397656342581 32 32.5271830457833 24.846284902797663 27.37440043827015 15.252131613148881 33 30.050063040188363 27.123502431272595 25.526905241563398 17.299529286975645 34 18.388599536474917 27.208494981068515 29.133600517531775 25.26930496492479 35 18.854941515412307 24.734094737067046 33.90746205446906 22.503501693051593 36 34.67764025713403 21.370915258056808 26.714469714483315 17.236974770325848 37 19.59073416078842 32.029175271150514 30.649770471548383 17.730320096512685 38 19.685537279189354 33.42509290899872 24.51204562982879 22.377324181983134 39 19.709626596160085 32.165551888194486 28.8870735559523 19.237747959693134 40 24.205781047535606 25.71359744808655 25.80772062608912 24.272900878288723 41 16.116530128159052 22.729436173994806 28.209852919178395 32.94418077866774 42 22.837255294307347 23.452407086144564 23.547793010601243 30.162544608946853 43 21.775868332455886 25.918745179708246 25.12078655505283 27.184599932783033 44 18.86174091939598 30.81373324189754 28.752639625760807 21.571886212945675 45 15.464175883096875 41.796130556327235 21.337986715907302 21.401706844668585 46 22.0866982288524 34.04063323820644 25.727390524739146 18.145278008202023 47 21.763920808313145 26.961773750803786 26.652303735204015 24.622001705679057 48 22.758479342439355 22.085046945027788 33.16049895969119 21.995974752841665 49 21.03997855273715 21.401706844668585 34.611686038492394 22.946628564101868 50 18.68777331175656 34.30367303803198 26.257258363752573 20.75129528645889 >>END_MODULE >>Per sequence GC content fail #GC Content Count 0 286.0 1 722.0 2 1158.0 3 8272.0 4 15386.0 5 11712.0 6 8038.0 7 8534.5 8 9031.0 9 9674.5 10 10318.0 11 10274.0 12 10230.0 13 9467.5 14 8705.0 15 7733.5 16 6762.0 17 6037.0 18 5312.0 19 4837.5 20 4363.0 21 4127.5 22 3892.0 23 3582.0 24 3272.0 25 4322.5 26 5373.0 27 5123.0 28 4873.0 29 6505.0 30 8137.0 31 10893.0 32 13649.0 33 15318.5 34 16988.0 35 17970.5 36 18953.0 37 19029.5 38 19106.0 39 31480.5 40 43855.0 41 66691.0 42 89527.0 43 108649.0 44 127771.0 45 123442.0 46 119113.0 47 105140.5 48 91168.0 49 84847.5 50 78527.0 51 71314.5 52 64102.0 53 59811.0 54 55520.0 55 48986.0 56 42452.0 57 38015.5 58 33579.0 59 32502.5 60 31426.0 61 27709.5 62 23993.0 63 22232.0 64 20471.0 65 16762.5 66 13054.0 67 10472.0 68 7890.0 69 6175.5 70 4461.0 71 4216.0 72 3971.0 73 3003.5 74 2036.0 75 1578.0 76 1120.0 77 950.0 78 780.0 79 657.5 80 535.0 81 350.5 82 166.0 83 136.0 84 106.0 85 65.5 86 25.0 87 17.5 88 10.0 89 6.5 90 3.0 91 3.0 92 3.0 93 3.5 94 4.0 95 2.5 96 1.0 97 0.5 98 0.0 99 0.5 100 1.0 >>END_MODULE >>Per base N content pass #Base N-Count 1 0.0 2 0.0 3 0.0 4 0.0 5 0.0 6 0.0 7 0.0 8 0.0 9 0.0 10 0.0 11 0.0 12 0.0 13 0.0 14 0.0 15 0.0 16 0.0 17 0.0 18 0.0 19 0.0 20 0.0 21 0.0 22 0.0 23 0.0 24 0.0 25 0.0 26 0.0 27 0.0 28 0.0 29 0.0 30 0.0 31 0.0 32 0.0 33 0.0 34 0.0 35 0.0 36 0.0 37 0.0 38 0.0 39 0.0 40 0.0 41 0.0 42 0.0 43 0.0 44 0.0 45 0.0 46 0.0 47 0.0 48 0.0 49 0.0 50 0.0 >>END_MODULE >>Sequence Length Distribution pass #Length Count 50 1029502.0 >>END_MODULE >>Sequence Duplication Levels fail #Total Deduplicated Percentage 16.924202244773255 #Duplication Level Percentage of deduplicated Percentage of total 1 82.14562107908199 13.902491046648926 2 6.5498967798757555 2.2170355557001273 3 1.960496067337654 0.9953949583111518 4 0.9347800251091646 0.632816247972869 5 0.5950243211920793 0.5035155976206834 6 0.4043968268673759 0.4106456211028814 7 0.3275166623228543 0.3880070762179566 8 0.24507743492304798 0.3318192059414336 9 0.22900877535576822 0.34882117469539786 >10 3.1137955114725395 13.560905659637468 >50 1.7677416632887542 21.937626870926145 >100 1.723171883304067 43.39161498208735 >500 0.0023153132459577657 0.21659414580520545 >1k 5.788283114894414E-4 0.31122550937274435 >5k 5.788283114894414E-4 0.8514863479596769 >10k+ 0.0 0.0 >>END_MODULE >>Overrepresented sequences warn #Sequence Count Percentage Possible Source CGTTTTTTTTTTTTTTTTTTTTTTTTTTTTTTTTTTTTTTTTTTTTTTTT 8692 0.8442917060870208 No Hit GACCAGAAAAATGGTCCTGCCAAGCGGCTACAGTGTTCTTCTTTCAGATA 3177 0.30859580651616025 No Hit >>END_MODULE >>Adapter Content pass #Position Illumina Universal Adapter Illumina Small RNA 3' Adapter Illumina Small RNA 5' Adapter Nextera Transposase Sequence SOLID Small RNA Adapter 1 0.0 0.0 0.0 0.030985855297027107 0.0 2 0.0 0.0 0.0 0.11549273337982831 0.0 3 0.0 0.0 0.0 0.16114587441306574 0.0 4 9.713434262390942E-5 0.0 0.0 0.23671639297446725 0.0 5 9.713434262390942E-5 0.0 0.0 0.38601187758741606 0.0 6 9.713434262390942E-5 0.0 0.0 0.5226798976592566 0.0 7 9.713434262390942E-5 0.0 0.0 0.6009701778141276 0.0 8 9.713434262390942E-5 0.0 0.0 0.7827085328634621 0.0 9 9.713434262390942E-5 0.0 0.0 0.8419604818640469 0.0 10 9.713434262390942E-5 0.0 0.0 0.9609500515783359 0.0 11 9.713434262390942E-5 0.0 0.0 1.0930527575468527 0.0 12 9.713434262390942E-5 0.0 0.0 1.2081569535561854 0.0 13 9.713434262390942E-5 0.0 0.0 1.2576954682943793 0.0 14 9.713434262390942E-5 0.0 0.0 1.2738197691699482 0.0 15 9.713434262390942E-5 0.0 0.0 1.3046113557817274 0.0 16 9.713434262390942E-5 0.0 0.0 1.3847471884464528 0.0 17 9.713434262390942E-5 0.0 0.0 1.4689626635013822 0.0 18 9.713434262390942E-5 0.0 0.0 1.6244747460422613 0.0 19 9.713434262390942E-5 0.0 0.0 1.6731390516968399 0.0 20 9.713434262390942E-5 0.0 0.0 1.7263686714547422 0.0 21 9.713434262390942E-5 0.0 0.0 1.8100013404539281 0.0 22 9.713434262390942E-5 0.0 0.0 1.8866403367841929 0.0 23 9.713434262390942E-5 0.0 0.0 1.9909626207622715 0.0 24 9.713434262390942E-5 0.0 0.0 2.06099648179411 0.0 25 9.713434262390942E-5 0.0 0.0 2.113449026811021 0.0 26 9.713434262390942E-5 0.0 0.0 2.180180320193647 0.0 27 9.713434262390942E-5 0.0 0.0 2.2310787157285756 0.0 28 9.713434262390942E-5 0.0 0.0 2.2872223657651953 0.0 29 9.713434262390942E-5 0.0 0.0 2.3482227329330105 0.0 30 9.713434262390942E-5 0.0 0.0 2.4454542098995438 0.0 31 9.713434262390942E-5 0.0 0.0 2.5421028808103334 0.0 32 9.713434262390942E-5 0.0 0.0 2.614467966065146 0.0 33 9.713434262390942E-5 0.0 0.0 2.687707260403574 0.0 34 9.713434262390942E-5 0.0 0.0 2.7631806446223512 0.0 35 9.713434262390942E-5 0.0 0.0 2.8899409617465532 0.0 36 9.713434262390942E-5 0.0 0.0 2.9769733327375762 0.0 37 9.713434262390942E-5 0.0 0.0 3.065559853210581 0.0 38 9.713434262390942E-5 0.0 0.0 3.147541238385161 0.0 >>END_MODULE >>Kmer Content fail #Sequence Count PValue Obs/Exp Max Max Obs/Exp Position CGGGAAC 95 0.0 44.000004 6 TCACGAC 135 0.0 44.0 25 ATTTATA 25 4.4425164E-5 44.0 35 ATCCTAC 30 2.5274585E-6 44.0 29 TATCACG 25 4.4425164E-5 44.0 1 GTGCACG 35 1.4458965E-7 44.0 1 GTGCAAG 100 0.0 44.0 1 AACCGAG 30 2.5274585E-6 44.0 1 ATCTCGC 20 7.8561E-4 44.0 11 GGTACGC 30 2.5274585E-6 44.0 7 AAATCGT 45 4.802132E-10 44.0 12 CGAACGT 25 4.4425164E-5 44.0 38 TCACCCG 20 7.8561E-4 44.0 38 GTCGAAT 20 7.8561E-4 44.0 30 GTACACG 20 7.8561E-4 44.0 23 GATCGAC 40 8.310963E-9 44.0 9 GGTCGAC 20 7.8561E-4 44.0 9 ACTTGTC 30 2.5274585E-6 44.0 10 CCGATCA 30 2.5274585E-6 44.0 12 TCTTCGA 25 4.4425164E-5 44.0 28 >>END_MODULE