##FastQC 0.11.5 >>Basic Statistics pass #Measure Value Filename SRR1545951_1.fastq.gz File type Conventional base calls Encoding Illumina 1.5 Total Sequences 961662 Sequences flagged as poor quality 0 Sequence length 50 %GC 46 >>END_MODULE >>Per base sequence quality pass #Base Mean Median Lower Quartile Upper Quartile 10th Percentile 90th Percentile 1 31.470556182941614 31.0 31.0 33.0 30.0 34.0 2 31.869553959707257 31.0 31.0 34.0 30.0 34.0 3 31.962467062231845 31.0 31.0 34.0 30.0 34.0 4 35.73940116173874 37.0 35.0 37.0 35.0 37.0 5 35.66786563262352 37.0 35.0 37.0 33.0 37.0 6 35.729386208459935 37.0 35.0 37.0 33.0 37.0 7 35.93911374266634 37.0 35.0 37.0 35.0 37.0 8 35.91962664636848 37.0 35.0 37.0 35.0 37.0 9 37.7568969138845 39.0 38.0 39.0 35.0 39.0 10 37.27363252369336 39.0 37.0 39.0 34.0 39.0 11 36.947135272060244 39.0 37.0 39.0 33.0 39.0 12 35.93436779242603 37.0 35.0 39.0 32.0 39.0 13 35.52525003587539 37.0 35.0 39.0 31.0 39.0 14 36.38065245377274 38.0 35.0 41.0 31.0 41.0 15 36.67154156034033 38.0 35.0 41.0 32.0 41.0 16 36.90421062701864 38.0 35.0 41.0 32.0 41.0 17 36.85093307211889 38.0 35.0 41.0 32.0 41.0 18 36.78767487953148 38.0 35.0 40.0 32.0 41.0 19 36.64580278725789 37.0 35.0 40.0 32.0 41.0 20 36.42609565523021 36.0 35.0 40.0 32.0 41.0 21 36.23659144273144 36.0 35.0 40.0 31.0 41.0 22 36.153957419550736 36.0 35.0 40.0 31.0 41.0 23 36.12899022733559 36.0 35.0 40.0 31.0 41.0 24 36.14346828719446 36.0 35.0 40.0 31.0 41.0 25 36.08887946076688 36.0 35.0 40.0 31.0 41.0 26 35.89236238928022 36.0 35.0 40.0 31.0 41.0 27 35.863692232821926 36.0 35.0 40.0 31.0 41.0 28 35.85927176076418 36.0 35.0 40.0 31.0 41.0 29 35.81598108275049 36.0 35.0 40.0 31.0 41.0 30 35.70615663299579 36.0 35.0 40.0 30.0 41.0 31 35.443636121631094 36.0 34.0 40.0 30.0 41.0 32 35.18214299826758 35.0 34.0 40.0 29.0 41.0 33 34.93630402365904 35.0 34.0 40.0 27.0 41.0 34 34.71612375242029 35.0 34.0 40.0 26.0 41.0 35 34.48035380414324 35.0 34.0 40.0 24.0 41.0 36 34.25071282841581 35.0 33.0 40.0 23.0 41.0 37 34.15429641599647 35.0 33.0 40.0 23.0 41.0 38 34.0881515542883 35.0 33.0 40.0 23.0 41.0 39 34.00651580284965 35.0 33.0 40.0 23.0 41.0 40 33.81283236729745 35.0 33.0 40.0 23.0 41.0 41 33.78852029091302 35.0 33.0 40.0 22.0 41.0 42 33.74550829709399 35.0 33.0 40.0 22.0 41.0 43 33.65365273869613 35.0 33.0 40.0 22.0 41.0 44 33.52642924437068 35.0 33.0 40.0 22.0 41.0 45 33.42512545988092 35.0 33.0 40.0 22.0 41.0 46 33.42294693977718 35.0 33.0 39.0 22.0 41.0 47 33.36709571554247 35.0 33.0 39.0 22.0 41.0 48 33.2741742940867 35.0 33.0 39.0 22.0 41.0 49 33.2514833694167 35.0 33.0 39.0 21.0 41.0 50 33.057451578621176 35.0 33.0 39.0 20.0 41.0 >>END_MODULE >>Per sequence quality scores pass #Quality Count 9 1.0 10 0.0 11 2.0 12 4.0 13 4.0 14 11.0 15 30.0 16 72.0 17 194.0 18 415.0 19 926.0 20 1631.0 21 2604.0 22 4107.0 23 6044.0 24 8844.0 25 13369.0 26 18828.0 27 22604.0 28 23592.0 29 23862.0 30 26392.0 31 30439.0 32 37614.0 33 49736.0 34 95232.0 35 167109.0 36 58239.0 37 74248.0 38 111472.0 39 184037.0 >>END_MODULE >>Per base sequence content fail #Base G A T C 1 34.04896938841298 22.63830743026136 27.678123914639446 15.634599266686216 2 33.76997323383892 24.187708363229493 29.34367792426029 12.6986404786713 3 28.608700354178495 23.874500604162378 34.55424047118426 12.962558570474867 4 25.006187205067892 26.68837907705618 33.94851829436954 14.35691542350639 5 22.04235999758751 31.61495411069586 32.89606951298897 13.446616378727661 6 19.530874673221984 41.66432696727124 28.901526731845493 9.903271627661278 7 86.55889491318155 3.5579028806378954 8.626003731040637 1.2571984751399141 8 88.78108940563317 1.9851049537155465 8.215672450403572 1.0181331902477169 9 85.74311972397787 3.175855966025485 9.28611092046894 1.7949133895277136 10 55.47292083913059 21.108767945494364 14.300346691457081 9.117964523917967 11 49.18495271727488 18.76033367232978 19.831084102314534 12.223629508080801 12 43.73334913930258 19.728553275475168 23.542471263292093 12.995626321930159 13 21.74329442153272 39.11727821209531 25.206361486676194 13.933065879695777 14 15.522917615544754 41.183388758212345 29.051475466432073 14.242218159810827 15 14.205614862602452 21.768355201723683 49.43680835886205 14.589221576811811 16 17.18400019965435 15.858378515528324 47.811393192202665 19.146228092614663 17 17.52871591057981 16.972075427749044 29.673939492254036 35.82526916941711 18 23.043751338827985 20.950708253003654 35.803327988420044 20.20221241974831 19 29.466694119139575 22.598376560579496 27.20404882380712 20.730880496473812 20 32.30116194671309 21.215978171124576 25.83319295136961 20.649666930792733 21 22.45362715798274 26.848102555783633 30.0753279218686 20.622942364365027 22 23.021394211271737 21.341386058719173 27.88089786224266 27.75632186776643 23 19.41420166337029 28.11517976170422 27.408070611087886 25.062547963837606 24 20.46155509940083 22.20665888846601 39.96320952684 17.36857648529317 25 18.21689949275317 22.04059222471097 37.694325033119746 22.048183249416116 26 17.045178035525996 32.32913435281835 28.462287165344996 22.163400446310657 27 17.27415661635793 31.777797188617207 31.23550686207836 19.712539332946502 28 15.61359396544732 26.174997036380766 40.433125152080464 17.778283846091455 29 16.375712048516007 23.147426018705115 39.40292951161635 21.073932421162528 30 19.65170714866554 27.999858578169878 33.825398112850465 18.523036160314124 31 31.232699222803856 23.46073776441203 26.142137258205068 19.16442575457905 32 30.614810609132938 25.177661174092353 26.72456642770537 17.48296178906934 33 28.53861335895564 25.50605098256976 26.702417273428708 19.252918385045888 34 20.50481354155618 25.999051641845057 28.837262988451247 24.658871828147518 35 20.54401650475947 24.995788541088242 31.971420311918326 22.488774642233967 36 32.279636712275206 22.42555076523768 26.410942722079067 18.883869800408043 37 21.388388019907204 30.751968987024547 27.713999305369246 20.145643687699007 38 21.776154199708422 31.600084021204957 24.26299469044217 22.36076708864445 39 21.3705023178622 30.13012888104136 26.45056163184154 22.048807169254893 40 25.091976182900023 25.365876992124054 25.65059241188692 23.891554413089004 41 18.919745191137842 23.140042967279566 27.996946952255573 29.943264889327022 42 23.30600564439481 24.30812489211386 24.340464737090578 28.04540472640075 43 22.873733182760677 24.733014302322438 25.18400435911994 27.209248155796946 44 20.774762858467945 27.98550842187796 28.920140340369073 22.31958837928503 45 18.405219297424665 35.595666668746404 23.255572124093497 22.743541909735438 46 22.770786409362128 30.72524442059684 26.870667656619478 19.633301513421557 47 22.478895911453296 26.727374066979877 27.24782719916145 23.545902822405377 48 23.835297640959087 23.681085454140852 30.569264460902062 21.914352443997995 49 21.87275778807939 22.145514744265657 32.687160353637765 23.29456711401719 50 20.189838009612526 30.837446004937284 27.38945700256431 21.583258982885877 >>END_MODULE >>Per sequence GC content fail #GC Content Count 0 240.0 1 750.5 2 1261.0 3 7700.5 4 14140.0 5 10389.5 6 6639.0 7 6810.0 8 6981.0 9 7185.0 10 7389.0 11 7276.5 12 7164.0 13 6636.0 14 6108.0 15 5462.5 16 4817.0 17 4417.0 18 4017.0 19 3770.5 20 3524.0 21 3443.5 22 3363.0 23 3259.5 24 3156.0 25 3301.5 26 3447.0 27 4093.5 28 4740.0 29 6243.5 30 7747.0 31 9508.0 32 11269.0 33 12563.0 34 13857.0 35 16089.0 36 18321.0 37 20313.0 38 22305.0 39 29556.5 40 36808.0 41 54497.5 42 72187.0 43 85169.0 44 98151.0 45 95442.0 46 92733.0 47 87097.0 48 81461.0 49 78622.0 50 75783.0 51 73403.0 52 71023.0 53 64793.0 54 58563.0 55 52076.0 56 45589.0 57 42268.0 58 38947.0 59 37191.5 60 35436.0 61 32430.5 62 29425.0 63 27513.0 64 25601.0 65 21783.5 66 17966.0 67 14895.0 68 11824.0 69 9446.0 70 7068.0 71 6467.0 72 5866.0 73 4468.5 74 3071.0 75 2370.5 76 1670.0 77 1312.0 78 954.0 79 716.5 80 479.0 81 393.5 82 308.0 83 232.0 84 156.0 85 104.0 86 52.0 87 38.5 88 25.0 89 22.5 90 20.0 91 13.5 92 7.0 93 5.5 94 4.0 95 2.0 96 0.0 97 0.0 98 0.0 99 0.0 100 0.0 >>END_MODULE >>Per base N content pass #Base N-Count 1 0.0 2 0.0 3 0.0 4 0.0 5 0.0 6 0.0 7 0.0 8 0.0 9 0.0 10 0.0 11 0.0 12 0.0 13 0.0 14 0.0 15 0.0 16 0.0 17 0.0 18 0.0 19 0.0 20 0.0 21 0.0 22 0.0 23 0.0 24 0.0 25 0.0 26 0.0 27 0.0 28 0.0 29 0.0 30 0.0 31 0.0 32 0.0 33 0.0 34 0.0 35 0.0 36 0.0 37 0.0 38 0.0 39 0.0 40 0.0 41 0.0 42 0.0 43 0.0 44 0.0 45 0.0 46 0.0 47 0.0 48 0.0 49 0.0 50 0.0 >>END_MODULE >>Sequence Length Distribution pass #Length Count 50 961662.0 >>END_MODULE >>Sequence Duplication Levels fail #Total Deduplicated Percentage 19.13025566187798 #Duplication Level Percentage of deduplicated Percentage of total 1 79.82754468674936 15.271213387175045 2 6.327798047814413 2.421047888628442 3 2.2712818016646494 1.3035060463804677 4 1.2226835673225696 0.9356099694583102 5 0.7968192398642182 0.7621677887452885 6 0.5882337676381298 0.675183741832029 7 0.4620483590140698 0.6187372265263238 8 0.38794304677253655 0.5937159733605211 9 0.31776731419647675 0.5471072965410219 >10 4.709133075052776 22.998100781291832 >50 2.2147289626920914 30.57775783661786 >100 0.8690708587779086 21.860544658095833 >500 0.0038478785651140796 0.41800475758329697 >1k 5.4969693787344E-4 0.1823447168929401 >5k 5.4969693787344E-4 0.834957930870787 >10k+ 0.0 0.0 >>END_MODULE >>Overrepresented sequences warn #Sequence Count Percentage Possible Source CGTTTTTTTTTTTTTTTTTTTTTTTTTTTTTTTTTTTTTTTTTTTTTTTT 7940 0.8256539199843603 No Hit GACCAGAAAAATGGTCCTGCCAAGCGGCTACAGTGTTCTTCTTTCAGATA 1734 0.18031283340716384 No Hit >>END_MODULE >>Adapter Content pass #Position Illumina Universal Adapter Illumina Small RNA 3' Adapter Illumina Small RNA 5' Adapter Nextera Transposase Sequence SOLID Small RNA Adapter 1 0.0 0.0 0.0 0.029948152261397454 0.0 2 0.0 0.0 0.0 0.09618764181178002 0.0 3 0.0 0.0 0.0 0.13934209732733538 0.0 4 0.0 0.0 0.0 0.20246198768382237 0.0 5 0.0 0.0 0.0 0.34159611173156473 0.0 6 0.0 0.0 0.0 0.45847709486285204 0.0 7 0.0 0.0 0.0 0.5309557828010257 0.0 8 0.0 0.0 0.0 0.7140762554826956 0.0 9 0.0 0.0 0.0 0.7854110903831075 0.0 10 0.0 0.0 0.0 0.9284967067431177 0.0 11 0.0 0.0 0.0 1.0800052409266458 0.0 12 0.0 0.0 0.0 1.2156038192213063 0.0 13 0.0 0.0 0.0 1.2709247115930544 0.0 14 0.0 0.0 0.0 1.2938017723482886 0.0 15 0.0 0.0 0.0 1.3299891229974772 0.0 16 0.0 0.0 0.0 1.4177538469857394 0.0 17 0.0 0.0 0.0 1.504270731296443 0.0 18 0.0 0.0 0.0 1.6548433857218026 0.0 19 0.0 0.0 0.0 1.7177553027986965 0.0 20 0.0 0.0 0.0 1.7873223648225676 0.0 21 0.0 0.0 0.0 1.8797664876016729 0.0 22 0.0 0.0 0.0 1.9674272249501383 0.0 23 0.0 0.0 0.0 2.073597584182384 0.0 24 0.0 0.0 0.0 2.1455563389215753 0.0 25 0.0 0.0 0.0 2.204412777046405 0.0 26 0.0 0.0 0.0 2.2717961196345495 0.0 27 0.0 0.0 0.0 2.3528017120360376 0.0 28 0.0 0.0 0.0 2.429231892286479 0.0 29 0.0 0.0 0.0 2.512213230844101 0.0 30 0.0 0.0 0.0 2.6241028552651557 0.0 31 0.0 0.0 0.0 2.719146644039174 0.0 32 0.0 0.0 0.0 2.7972406105263596 0.0 33 0.0 0.0 0.0 2.8920764260207847 0.0 34 0.0 0.0 0.0 2.990967720467274 0.0 35 1.0398663979651895E-4 0.0 0.0 3.118767300777196 0.0 36 1.0398663979651895E-4 0.0 0.0 3.2125632498736563 0.0 37 1.0398663979651895E-4 0.0 0.0 3.3138462370354658 0.0 38 1.0398663979651895E-4 0.0 0.0 3.4364464853555616 0.0 >>END_MODULE >>Kmer Content fail #Sequence Count PValue Obs/Exp Max Max Obs/Exp Position AACGTTG 30 2.5272839E-6 44.000004 1 ATTCACG 30 2.5272839E-6 44.000004 41 CCGCAAT 30 2.5272839E-6 44.000004 33 GTAGTAA 30 2.5272839E-6 44.000004 1 AACGTCA 20 7.85584E-4 44.0 10 TACCCGC 25 4.442296E-5 44.0 22 CTCGTAG 20 7.85584E-4 44.0 1 CGTGCAT 20 7.85584E-4 44.0 44 TTTCGCG 25 4.442296E-5 44.0 1 GACGTAA 20 7.85584E-4 44.0 20 ATTCGTT 20 7.85584E-4 44.0 18 ATAGACG 25 4.442296E-5 44.0 1 TGACGTT 20 7.85584E-4 44.0 13 CCCGTAT 20 7.85584E-4 44.0 39 GGTATCG 35 1.445751E-7 44.0 1 GCGATAC 25 4.442296E-5 44.0 9 ACGTATG 25 4.442296E-5 44.0 1 TCATACG 20 7.85584E-4 44.0 20 GTGACGT 20 7.85584E-4 44.0 20 CAATCGT 25 4.442296E-5 44.0 42 >>END_MODULE