##FastQC 0.11.5 >>Basic Statistics pass #Measure Value Filename SRR1545937_1.fastq.gz File type Conventional base calls Encoding Illumina 1.5 Total Sequences 1458476 Sequences flagged as poor quality 0 Sequence length 50 %GC 45 >>END_MODULE >>Per base sequence quality pass #Base Mean Median Lower Quartile Upper Quartile 10th Percentile 90th Percentile 1 31.496701351273522 31.0 31.0 33.0 30.0 34.0 2 31.90089723793878 31.0 31.0 34.0 30.0 34.0 3 31.950760931273468 31.0 31.0 34.0 30.0 34.0 4 35.73094312145006 37.0 35.0 37.0 33.0 37.0 5 35.66425775946947 37.0 35.0 37.0 33.0 37.0 6 35.708696612080004 37.0 35.0 37.0 33.0 37.0 7 35.98052144841602 37.0 35.0 37.0 35.0 37.0 8 35.96954972176436 37.0 35.0 37.0 35.0 37.0 9 37.788638962862606 39.0 38.0 39.0 35.0 39.0 10 37.26335160811696 39.0 37.0 39.0 34.0 39.0 11 36.943140648183444 39.0 37.0 39.0 33.0 39.0 12 36.07667181359172 37.0 35.0 39.0 32.0 39.0 13 35.71629084057605 37.0 35.0 39.0 31.0 39.0 14 36.633095779430036 38.0 35.0 41.0 31.0 41.0 15 36.89510146207411 38.0 35.0 41.0 32.0 41.0 16 37.10421426201048 38.0 35.0 41.0 32.0 41.0 17 37.057739037186764 38.0 35.0 41.0 32.0 41.0 18 36.96174088569164 38.0 35.0 40.0 32.0 41.0 19 36.809436014031085 37.0 35.0 40.0 32.0 41.0 20 36.570111541088096 37.0 35.0 40.0 32.0 41.0 21 36.421170454638954 37.0 35.0 40.0 31.0 41.0 22 36.32342664534761 37.0 35.0 40.0 31.0 41.0 23 36.27576456520368 37.0 35.0 40.0 31.0 41.0 24 36.2994385920646 37.0 35.0 40.0 31.0 41.0 25 36.25697166082952 37.0 35.0 40.0 31.0 41.0 26 36.038882367622094 36.0 35.0 40.0 31.0 41.0 27 36.020786080813124 36.0 35.0 40.0 31.0 41.0 28 36.03563994196682 36.0 35.0 40.0 31.0 41.0 29 35.98168293478947 36.0 35.0 40.0 31.0 41.0 30 35.86255790290687 36.0 35.0 40.0 30.0 41.0 31 35.60156972072218 36.0 35.0 40.0 30.0 41.0 32 35.34893546414202 36.0 34.0 40.0 29.0 41.0 33 35.06878687067871 36.0 34.0 40.0 27.0 41.0 34 34.80489154432435 36.0 34.0 40.0 25.0 41.0 35 34.57383666237909 36.0 34.0 40.0 24.0 41.0 36 34.34495048255851 36.0 34.0 40.0 23.0 41.0 37 34.24475685578645 36.0 33.0 40.0 23.0 41.0 38 34.15700978281439 35.0 33.0 40.0 23.0 41.0 39 34.072857558163456 36.0 33.0 40.0 23.0 41.0 40 33.90446808860756 36.0 33.0 40.0 22.0 41.0 41 33.864957668141265 35.0 33.0 40.0 21.0 41.0 42 33.82055035530239 35.0 33.0 40.0 21.0 41.0 43 33.706671895869384 35.0 33.0 40.0 21.0 41.0 44 33.58848757195867 35.0 33.0 40.0 21.0 41.0 45 33.49158916567705 35.0 33.0 40.0 20.0 41.0 46 33.46984592135901 35.0 33.0 40.0 21.0 41.0 47 33.40283419130654 35.0 33.0 40.0 20.0 41.0 48 33.31966244216566 35.0 33.0 40.0 20.0 41.0 49 33.28774076501773 35.0 33.0 39.0 20.0 41.0 50 33.13139400305524 35.0 33.0 39.0 20.0 41.0 >>END_MODULE >>Per sequence quality scores pass #Quality Count 11 3.0 12 1.0 13 8.0 14 18.0 15 53.0 16 94.0 17 279.0 18 698.0 19 1382.0 20 2468.0 21 3953.0 22 6022.0 23 9094.0 24 13323.0 25 20353.0 26 29553.0 27 35750.0 28 36523.0 29 35577.0 30 39085.0 31 45154.0 32 55331.0 33 72635.0 34 134271.0 35 231927.0 36 89363.0 37 113763.0 38 174031.0 39 307764.0 >>END_MODULE >>Per base sequence content fail #Base G A T C 1 32.62480836160485 22.732701806543268 28.227478546098805 16.415011285753074 2 34.62525266099682 23.719896659252534 28.843326869965637 12.811523809785008 3 27.957196415984903 24.274790946165723 34.85110485191392 12.916907785935456 4 24.628653471157563 26.801469479100103 34.06027936009917 14.509597689643162 5 22.230945178391693 31.08045658618997 32.48356503638044 14.205033199037901 6 18.90843592901083 40.498095272051096 30.569512285426704 10.023956513511365 7 85.65495764071538 3.439823486982302 9.727619789424029 1.177599082878292 8 87.23180909387608 2.209018180621416 9.264876487511623 1.294296237990889 9 84.11711951379385 3.449971065687745 10.510423208883795 1.9224862116346104 10 50.325819554109906 22.82690973317353 16.279116008765314 10.568154703951247 11 44.748628019933136 19.2030585350736 22.944498229658905 13.103815215334363 12 40.815001412433254 20.158645051409827 26.447127001061382 12.57922653509554 13 21.588219483899632 37.57552404016247 26.880387472951217 13.95586900298668 14 15.475057525800903 39.49177086218765 30.638694088898276 14.394477523113167 15 13.680033130473179 21.822779394381534 49.09844248379815 15.398744991347133 16 16.13561004774847 16.865824326214486 46.99720804456158 20.001357581475457 17 17.225720546652806 17.213378896875916 31.287179219952883 34.27372133651839 18 22.17856173156089 21.23860797160872 36.70475208368187 19.87807821314852 19 27.559109645959207 23.948217180125006 27.636793474832633 20.85587969908315 20 28.776339137565515 22.58240793814914 27.83275144740126 20.80850147688409 21 21.62613577460308 25.862475625241693 31.597297452957747 20.914091147197485 22 22.312125808035237 22.055145233791986 29.531579539190222 26.101149418982555 23 18.52735320978885 28.575650199249083 28.651619910097935 24.245376680864133 24 19.27203464438222 22.865785929970738 40.64489233967512 17.217287085971932 25 18.136945688513215 23.399219459216333 37.72046986031995 20.743364991950504 26 16.78279244910441 31.512071504776216 30.116779432777776 21.588356613341595 27 16.445454021869406 30.989059813119997 32.858271236551026 19.70721492845957 28 15.432067445744737 25.22160117821616 40.56809985217446 18.778231523864637 29 15.885828769208407 23.089786873421296 39.78125111417671 21.24313324319358 30 19.612938437108323 28.035977280394054 33.974984847196666 18.376099435300958 31 28.992318008661094 24.49694064214975 27.278542807697896 19.232198541491254 32 28.515038985900347 24.998628705580344 28.21273713108752 18.273595177431783 33 26.064124469651883 26.06378164604697 27.45708534113691 20.415008543164234 34 18.190289041437772 26.699582303719772 30.782680002962 24.327448651880456 35 20.422482097751352 25.137540830291343 32.085958219401626 22.354018852555683 36 29.622084970887418 23.93765821309367 27.333600278647026 19.106656537371887 37 19.82103236529089 31.093072494850787 28.825088654184235 20.260806485674088 38 20.782926835957532 31.074765714348402 26.136391685567673 22.005915764126392 39 20.11455793581794 29.742484620933084 27.67827513102718 22.464682312221797 40 23.718182541227968 25.00932480205365 26.988993990987854 24.28349866573053 41 18.456525853013694 22.928454084948946 28.917171074464033 29.697848987573327 42 21.210290741842854 24.923276077220333 26.052742725968752 27.813690454968064 43 21.894223833645533 25.609540369536422 26.798864019702755 25.69737177711529 44 19.89953897081611 29.37113809209065 28.796977118581314 21.932345818511926 45 17.777529421121773 35.255088187944125 24.169064146410363 22.798318244523735 46 21.972044791960922 30.61284518908779 27.537991711896524 19.87711830705476 47 21.088656926819503 27.07346572723857 28.868421557845313 22.969455788096617 48 22.081611216091318 25.150156738952166 31.01230325353314 21.755928791423376 49 20.912034205568002 23.79230100461029 32.69508720061214 22.600577589209557 50 19.523118652620955 30.443147504655542 28.631393317408033 21.402340525315466 >>END_MODULE >>Per sequence GC content fail #GC Content Count 0 375.0 1 1012.5 2 1650.0 3 13310.0 4 24970.0 5 17879.5 6 10789.0 7 11066.5 8 11344.0 9 11717.5 10 12091.0 11 11941.0 12 11791.0 13 11041.5 14 10292.0 15 9388.5 16 8485.0 17 7630.5 18 6776.0 19 6369.5 20 5963.0 21 5585.5 22 5208.0 23 5605.5 24 6003.0 25 7358.5 26 8714.0 27 9685.0 28 10656.0 29 13053.0 30 15450.0 31 19433.5 32 23417.0 33 26801.0 34 30185.0 35 32289.0 36 34393.0 37 38673.5 38 42954.0 39 51380.5 40 59807.0 41 87632.5 42 115458.0 43 127564.5 44 139671.0 45 139092.0 46 138513.0 47 132509.5 48 126506.0 49 121584.0 50 116662.0 51 108841.5 52 101021.0 53 89469.5 54 77918.0 55 72239.0 56 66560.0 57 62513.5 58 58467.0 59 52493.5 60 46520.0 61 42097.5 62 37675.0 63 33892.5 64 30110.0 65 25950.5 66 21791.0 67 17855.0 68 13919.0 69 12041.0 70 10163.0 71 8749.5 72 7336.0 73 5815.5 74 4295.0 75 3223.5 76 2152.0 77 1656.0 78 1160.0 79 962.5 80 765.0 81 542.5 82 320.0 83 217.5 84 115.0 85 78.0 86 41.0 87 27.5 88 14.0 89 10.5 90 7.0 91 5.5 92 4.0 93 2.0 94 0.0 95 0.0 96 0.0 97 0.0 98 0.0 99 0.0 100 0.0 >>END_MODULE >>Per base N content pass #Base N-Count 1 0.0 2 0.0 3 0.0 4 0.0 5 0.0 6 0.0 7 0.0 8 0.0 9 0.0 10 0.0 11 0.0 12 0.0 13 0.0 14 0.0 15 0.0 16 0.0 17 0.0 18 0.0 19 0.0 20 0.0 21 0.0 22 0.0 23 0.0 24 0.0 25 0.0 26 0.0 27 0.0 28 0.0 29 0.0 30 0.0 31 0.0 32 0.0 33 0.0 34 0.0 35 0.0 36 0.0 37 0.0 38 0.0 39 0.0 40 0.0 41 0.0 42 0.0 43 0.0 44 0.0 45 0.0 46 0.0 47 0.0 48 0.0 49 0.0 50 0.0 >>END_MODULE >>Sequence Length Distribution pass #Length Count 50 1458476.0 >>END_MODULE >>Sequence Duplication Levels fail #Total Deduplicated Percentage 18.920487922394855 #Duplication Level Percentage of deduplicated Percentage of total 1 79.73535149315724 15.086317549141901 2 6.771650167675632 2.5624585042437973 3 2.501780219044507 1.4200470725675385 4 1.3740707273264732 1.0399235440358738 5 0.9523095130716718 0.9009080320227146 6 0.6911981599404795 0.7846683862281234 7 0.5277120242247686 0.6989198286593091 8 0.42661264400022747 0.6457375502677791 9 0.3454294960887447 0.588212514790743 >10 3.894778655819752 17.11035259896368 >50 1.452314585891219 19.955696783052257 >100 1.322388023921008 37.455758428117555 >500 0.003670241531837378 0.4766551085895531 >1k 3.6702415318373775E-4 0.253466076100214 >5k 0.0 0.0 >10k+ 3.6702415318373775E-4 1.0208780232189714 >>END_MODULE >>Overrepresented sequences fail #Sequence Count Percentage Possible Source CGTTTTTTTTTTTTTTTTTTTTTTTTTTTTTTTTTTTTTTTTTTTTTTTT 14701 1.007969963167032 No Hit GACCAGAAAAATGGTCCTGCCAAGCGGCTACAGTGTTCTTCTTTCAGATA 3650 0.2502612315869442 No Hit >>END_MODULE >>Adapter Content pass #Position Illumina Universal Adapter Illumina Small RNA 3' Adapter Illumina Small RNA 5' Adapter Nextera Transposase Sequence SOLID Small RNA Adapter 1 0.0 0.0 0.0 0.024957558437711694 0.0 2 0.0 0.0 0.0 0.08481455985563012 0.0 3 0.0 0.0 0.0 0.12101673253450862 0.0 4 0.0 0.0 0.0 0.18341062862878785 0.0 5 0.0 0.0 0.0 0.32472251857418294 0.0 6 0.0 0.0 0.0 0.46630866740350885 0.0 7 0.0 0.0 0.0 0.5711441257860945 0.0 8 0.0 0.0 0.0 0.8578817889358481 0.0 9 0.0 0.0 0.0 0.9852064758007674 0.0 10 0.0 0.0 0.0 1.1987170169409713 0.0 11 0.0 0.0 0.0 1.376162514844262 0.0 12 0.0 0.0 0.0 1.5385923388523364 0.0 13 0.0 0.0 0.0 1.6007805407836673 0.0 14 0.0 0.0 0.0 1.622035604288312 0.0 15 0.0 0.0 0.0 1.658100647525225 0.0 16 0.0 0.0 0.0 1.7425723837759415 0.0 17 0.0 0.0 0.0 1.84596798301789 0.0 18 0.0 0.0 0.0 2.0122374314009965 0.0 19 0.0 0.0 0.0 2.0729857741916904 0.0 20 0.0 0.0 0.0 2.1496411322503763 0.0 21 0.0 0.0 0.0 2.2467287771619144 0.0 22 0.0 0.0 0.0 2.341622351002005 0.0 23 0.0 0.0 0.0 2.4450179502439533 0.0 24 0.0 0.0 0.0 2.529969639541549 0.0 25 0.0 0.0 0.0 2.5992200077341003 0.0 26 0.0 0.0 0.0 2.666276304855205 0.0 27 0.0 0.0 0.0 2.750336652780025 0.0 28 0.0 0.0 0.0 2.8274033991646075 0.0 29 0.0 0.0 0.0 2.9304561748016424 0.0 30 0.0 0.0 0.0 3.0494845304276517 0.0 31 0.0 0.0 0.0 3.151234576366015 0.0 32 0.0 0.0 0.0 3.2392031133868504 0.0 33 0.0 0.0 0.0 3.3327253928072866 0.0 34 0.0 0.0 0.0 3.4359838626072694 0.0 35 0.0 0.0 0.0 3.5691365507557204 0.0 36 0.0 0.0 0.0 3.670749467252118 0.0 37 0.0 0.0 0.0 3.7750364078668417 0.0 38 0.0 0.0 0.0 3.913605708972928 0.0 >>END_MODULE >>Kmer Content warn #Sequence Count PValue Obs/Exp Max Max Obs/Exp Position CTAGACG 20 7.857178E-4 44.000004 1 TACCCGT 30 2.528186E-6 44.000004 36 GTCGAAA 20 7.857178E-4 44.000004 43 CTATCGT 20 7.857178E-4 44.000004 13 ACGTTAG 30 2.528186E-6 44.000004 1 TAGACGC 30 2.528186E-6 44.000004 21 TGTGCGA 20 7.857178E-4 44.000004 10 AGTATCG 30 2.528186E-6 44.000004 30 ATATCGG 80 0.0 44.000004 2 ATATCGC 30 2.528186E-6 44.000004 43 CTAACCG 30 2.528186E-6 44.000004 26 ACTACGG 30 2.528186E-6 44.000004 2 TATAGCG 120 0.0 44.000004 1 ACGTAGA 30 2.528186E-6 44.000004 19 TAATGCG 65 0.0 44.000004 1 TCGAACA 20 7.857178E-4 44.000004 23 AATCGGC 30 2.528186E-6 44.000004 36 ATCGACG 20 7.857178E-4 44.000004 1 AATCGAC 20 7.857178E-4 44.000004 9 CTTACGC 20 7.857178E-4 44.000004 44 >>END_MODULE