##FastQC 0.11.5 >>Basic Statistics pass #Measure Value Filename SRR1545933_1.fastq.gz File type Conventional base calls Encoding Illumina 1.5 Total Sequences 1376762 Sequences flagged as poor quality 0 Sequence length 50 %GC 45 >>END_MODULE >>Per base sequence quality pass #Base Mean Median Lower Quartile Upper Quartile 10th Percentile 90th Percentile 1 31.5264286783046 31.0 31.0 33.0 30.0 34.0 2 31.921703242826283 31.0 31.0 34.0 30.0 34.0 3 31.962187364264846 33.0 31.0 34.0 30.0 34.0 4 35.732705434926295 37.0 35.0 37.0 35.0 37.0 5 35.66198515066511 37.0 35.0 37.0 33.0 37.0 6 35.718123393876354 37.0 35.0 37.0 33.0 37.0 7 36.01071717551763 37.0 35.0 37.0 35.0 37.0 8 36.00875459956042 37.0 35.0 37.0 35.0 37.0 9 37.823084164147474 39.0 38.0 39.0 35.0 39.0 10 37.31523168129277 39.0 37.0 39.0 34.0 39.0 11 36.94364385420283 39.0 37.0 39.0 33.0 39.0 12 36.21552817407802 38.0 35.0 39.0 32.0 39.0 13 35.91123229723075 38.0 35.0 39.0 32.0 39.0 14 36.879425783105575 39.0 35.0 41.0 31.0 41.0 15 37.07792196472593 39.0 35.0 41.0 32.0 41.0 16 37.26132476056137 39.0 35.0 41.0 33.0 41.0 17 37.20635738057849 39.0 35.0 41.0 32.0 41.0 18 37.10869562059383 38.0 35.0 41.0 32.0 41.0 19 36.953092110328434 38.0 35.0 41.0 32.0 41.0 20 36.74391361760421 38.0 35.0 40.0 32.0 41.0 21 36.608593932720396 38.0 35.0 40.0 32.0 41.0 22 36.51896333571089 38.0 35.0 40.0 31.0 41.0 23 36.45383225277862 38.0 35.0 40.0 31.0 41.0 24 36.49416892680071 38.0 35.0 40.0 32.0 41.0 25 36.44253690906635 38.0 35.0 40.0 31.0 41.0 26 36.22327969540124 37.0 35.0 40.0 31.0 41.0 27 36.207279834858895 37.0 35.0 40.0 31.0 41.0 28 36.18732722140791 37.0 35.0 40.0 31.0 41.0 29 36.14130910062887 37.0 35.0 40.0 31.0 41.0 30 36.009420655131386 37.0 35.0 40.0 30.0 41.0 31 35.786796846513774 37.0 35.0 40.0 30.0 41.0 32 35.52621586011235 37.0 34.0 40.0 29.0 41.0 33 35.25515593835391 37.0 34.0 40.0 27.0 41.0 34 34.9767243721137 37.0 34.0 40.0 26.0 41.0 35 34.73516337609551 37.0 34.0 40.0 24.0 41.0 36 34.536694069127414 37.0 34.0 40.0 23.0 41.0 37 34.42790620310555 36.0 34.0 40.0 23.0 41.0 38 34.32570698494003 36.0 33.0 40.0 23.0 41.0 39 34.23113217825593 36.0 33.0 40.0 23.0 41.0 40 34.06456163084106 36.0 33.0 40.0 22.0 41.0 41 34.03759110143947 36.0 33.0 40.0 22.0 41.0 42 34.00824979190303 36.0 33.0 40.0 22.0 41.0 43 33.91577193443747 35.0 33.0 40.0 22.0 41.0 44 33.800225456542236 35.0 33.0 40.0 21.0 41.0 45 33.69781777823618 35.0 33.0 40.0 21.0 41.0 46 33.66743562068099 35.0 33.0 40.0 21.0 41.0 47 33.61021803332748 35.0 33.0 40.0 21.0 41.0 48 33.49114153354029 35.0 33.0 40.0 20.0 41.0 49 33.43650609182996 35.0 33.0 40.0 20.0 41.0 50 33.297160293500255 35.0 33.0 40.0 20.0 41.0 >>END_MODULE >>Per sequence quality scores pass #Quality Count 8 1.0 9 0.0 10 0.0 11 2.0 12 3.0 13 7.0 14 9.0 15 38.0 16 99.0 17 262.0 18 572.0 19 1210.0 20 2293.0 21 3640.0 22 5513.0 23 8208.0 24 12242.0 25 18617.0 26 27272.0 27 32513.0 28 33181.0 29 33099.0 30 36168.0 31 40925.0 32 50647.0 33 66078.0 34 120363.0 35 199150.0 36 89245.0 37 112739.0 38 173975.0 39 308691.0 >>END_MODULE >>Per base sequence content fail #Base G A T C 1 33.176540317062795 22.701745109176457 27.617046374028337 16.504668199732418 2 34.32132786930494 23.84987383440275 29.625309240086523 12.203489056205793 3 27.683070857562893 24.53212683092648 35.31837746829154 12.46642484321909 4 24.750537856216255 26.10799833231888 34.82344806146596 14.31801574999891 5 21.99232692360771 31.440655683407883 33.31759592435004 13.249421468634376 6 19.3586836359516 40.280309886530866 30.574928709537307 9.786077767980233 7 86.08495876556732 3.0225994035279884 9.69898936780649 1.193452463098197 8 87.76956365733511 1.9891600726923027 9.149366411914333 1.0919098580582554 9 84.14206667528592 3.674346038022549 10.306429143163452 1.877158143528075 10 48.7419757372734 26.086716513093766 15.509652358214417 9.661655391418416 11 40.969753668390034 20.220560997470876 25.888570428294795 12.921114905844291 12 37.44401719396671 21.00326708610493 28.411591836497518 13.141123883430833 13 22.138539558761792 34.51722229404937 28.831998558937567 14.512239588251274 14 16.485638040561838 36.48706167078986 31.95897330112249 15.068326987525804 15 15.336492436601242 22.158513962471364 47.107197903486586 15.397795697440808 16 18.08569672899165 18.180774890649218 44.67119226126229 19.062336119096837 17 18.08032179853889 18.942562331034704 31.82075042745224 31.156365442974167 18 22.633904770759216 22.45398986898244 35.564026316821646 19.3480790434367 19 26.930435325786156 22.80009180962287 29.645356277991404 20.624116586599573 20 28.324648704714395 22.775105646437073 28.705687693297754 20.194557955550778 21 22.599403527988134 24.936263493617634 32.451505779502924 20.012827198891312 22 23.161737468059112 22.12088944930206 30.568391631959628 24.1489814506792 23 19.582978031061288 26.991230147258566 30.1510355457225 23.274756275957646 24 19.904602247883076 22.872362833953872 39.4725450005157 17.75048991764735 25 18.406812506446286 23.682379380023562 36.8120270605958 21.09878105293435 26 17.817676548306824 30.36799388710612 30.372933012387037 21.44139655220002 27 18.223992236857207 29.484544169580506 32.762452769614505 19.529010823947786 28 16.130819996484504 25.941811293455224 39.03005748270217 18.897311227358106 29 17.31068986506019 23.369834437615218 37.785034740935615 21.534440956388977 30 20.104564187564737 26.76671784956296 34.35118052357634 18.777537439295973 31 27.60186582720906 24.390272247490852 28.75958226621595 19.24827965908414 32 27.712197169881215 24.723300032975924 29.789244618895637 17.77525817824722 33 26.524410174017003 25.452184182887095 28.591579372469607 19.431826270626296 34 20.236322617852615 25.901571949254848 31.51125612124681 22.35084931164573 35 21.319080567302116 25.663477057036726 31.476028536522655 21.5414138391385 36 28.72704214671817 24.538300737527617 27.69817877018686 19.036478345567353 37 21.59959382957984 29.710799687963497 29.430431694076393 19.259174788380275 38 21.782268830778303 30.309087554711706 26.336578144951705 21.572065469558282 39 21.88751577977893 28.95002912631232 28.179380314099312 20.98307477980944 40 23.495418961301954 26.608956377354982 26.691541457419653 23.20408320392341 41 20.030767845132274 24.03269410399183 28.82829421497688 27.108243835899014 42 22.586983080590546 25.00228797715219 26.631908783072166 25.778820159185102 43 22.473601101715474 26.340064586326466 27.766164376994716 23.42016993496334 44 21.150641868383932 28.373023078789217 28.41195500747406 22.06438004535279 45 18.94982575056546 33.02749494829172 25.370688615752034 22.651990685390793 46 23.119391732194817 29.652111258155006 27.168239681223046 20.060257328427138 47 22.166721626541115 26.72393630852682 29.371234824900743 21.738107240031322 48 23.06498871990947 24.678702637057096 31.04196658536479 21.214342057668645 49 22.21792873423293 24.00610998850927 31.55200390481434 22.223957372443458 50 20.557801566283786 29.85802920185188 28.647217166075183 20.93695206578915 >>END_MODULE >>Per sequence GC content fail #GC Content Count 0 425.0 1 1387.0 2 2349.0 3 13157.5 4 23966.0 5 17268.0 6 10570.0 7 10740.5 8 10911.0 9 11098.0 10 11285.0 11 11063.0 12 10841.0 13 10225.5 14 9610.0 15 8865.0 16 8120.0 17 7353.0 18 6586.0 19 6265.5 20 5945.0 21 5609.0 22 5273.0 23 5631.5 24 5990.0 25 7009.0 26 8028.0 27 9702.5 28 11377.0 29 14062.0 30 16747.0 31 19715.0 32 22683.0 33 27071.0 34 31459.0 35 34666.5 36 37874.0 37 39708.0 38 41542.0 39 51363.5 40 61185.0 41 81706.0 42 102227.0 43 111986.0 44 121745.0 45 124618.5 46 127492.0 47 120531.0 48 113570.0 49 110017.0 50 106464.0 51 100933.5 52 95403.0 53 85377.0 54 75351.0 55 69486.0 56 63621.0 57 59663.0 58 55705.0 59 50358.5 60 45012.0 61 40783.0 62 36554.0 63 32798.0 64 29042.0 65 25045.0 66 21048.0 67 17468.0 68 13888.0 69 12407.0 70 10926.0 71 9101.0 72 7276.0 73 5731.5 74 4187.0 75 3263.0 76 2339.0 77 1708.0 78 1077.0 79 793.5 80 510.0 81 421.0 82 332.0 83 229.0 84 126.0 85 91.0 86 56.0 87 41.5 88 27.0 89 20.5 90 14.0 91 8.0 92 2.0 93 1.5 94 1.0 95 0.5 96 0.0 97 0.0 98 0.0 99 0.5 100 1.0 >>END_MODULE >>Per base N content pass #Base N-Count 1 0.0 2 0.0 3 0.0 4 0.0 5 0.0 6 0.0 7 0.0 8 0.0 9 0.0 10 0.0 11 0.0 12 0.0 13 0.0 14 0.0 15 0.0 16 0.0 17 0.0 18 0.0 19 0.0 20 0.0 21 0.0 22 0.0 23 0.0 24 0.0 25 0.0 26 0.0 27 0.0 28 0.0 29 0.0 30 0.0 31 0.0 32 0.0 33 0.0 34 0.0 35 0.0 36 0.0 37 0.0 38 0.0 39 0.0 40 0.0 41 0.0 42 0.0 43 0.0 44 0.0 45 0.0 46 0.0 47 0.0 48 0.0 49 0.0 50 0.0 >>END_MODULE >>Sequence Length Distribution pass #Length Count 50 1376762.0 >>END_MODULE >>Sequence Duplication Levels fail #Total Deduplicated Percentage 20.95786510666044 #Duplication Level Percentage of deduplicated Percentage of total 1 77.972663899985 16.34140572022858 2 6.901820403122032 2.892948419980567 3 2.671665092570918 1.6797718986082435 4 1.5679836291516585 1.314463575568494 5 1.0934681349778506 1.1458378835648682 6 0.7749054263268781 0.9744218037226745 7 0.6075598432447874 0.8913210067263613 8 0.5082709921937519 0.8521819913620092 9 0.41201372768991384 0.7771435314315788 >10 5.022890983541893 24.999628075653025 >50 1.705542799893578 25.640565388741894 >100 0.7594611155338408 21.221166551002284 >500 0.0010523710607858838 0.12931845947096138 >1k 3.507903535952945E-4 0.15005058316101885 >5k 0.0 0.0 >10k+ 3.507903535952945E-4 0.9897751107774605 >>END_MODULE >>Overrepresented sequences warn #Sequence Count Percentage Possible Source CGTTTTTTTTTTTTTTTTTTTTTTTTTTTTTTTTTTTTTTTTTTTTTTTT 13463 0.977874171425417 No Hit GACCAGAAAAATGGTCCTGCCAAGCGGCTACAGTGTTCTTCTTTCAGATA 2041 0.14824639262269007 No Hit >>END_MODULE >>Adapter Content pass #Position Illumina Universal Adapter Illumina Small RNA 3' Adapter Illumina Small RNA 5' Adapter Nextera Transposase Sequence SOLID Small RNA Adapter 1 0.0 0.0 0.0 0.035009682138234494 0.0 2 0.0 0.0 0.0 0.10328582572732252 0.0 3 0.0 0.0 0.0 0.14752005066961466 0.0 4 0.0 0.0 0.0 0.21274555805578596 0.0 5 0.0 0.0 0.0 0.3787873285288234 0.0 6 0.0 0.0 0.0 0.5309559676981207 0.0 7 0.0 0.0 0.0 0.6304648152694511 0.0 8 0.0 0.0 0.0 0.8750967850652474 0.0 9 0.0 0.0 0.0 0.9822322231438695 0.0 10 0.0 0.0 0.0 1.177327671739923 0.0 11 0.0 0.0 0.0 1.3636343827037642 0.0 12 0.0 0.0 0.0 1.5210326839352044 0.0 13 0.0 0.0 0.0 1.588291948789987 0.0 14 0.0 0.0 0.0 1.6155297720303146 0.0 15 0.0 0.0 0.0 1.6558417504259995 0.0 16 0.0 0.0 0.0 1.7525904985756435 0.0 17 0.0 0.0 0.0 1.8703305291691665 0.0 18 0.0 0.0 0.0 2.034048005392363 0.0 19 0.0 0.0 0.0 2.105374785184367 0.0 20 0.0 0.0 0.0 2.1905746962801125 0.0 21 0.0 0.0 0.0 2.3035208699833376 0.0 22 0.0 0.0 0.0 2.4159586043194103 0.0 23 0.0 0.0 0.0 2.541543128006148 0.0 24 0.0 0.0 0.0 2.6373476316167936 0.0 25 0.0 0.0 0.0 2.7208043220251574 0.0 26 0.0 0.0 0.0 2.8039704756522914 0.0 27 0.0 0.0 0.0 2.902680347075239 0.0 28 0.0 0.0 0.0 2.990712991787978 0.0 29 0.0 0.0 0.0 3.099301113772751 0.0 30 0.0 0.0 0.0 3.2302605679122465 0.0 31 0.0 0.0 0.0 3.342480399662396 0.0 32 0.0 0.0 0.0 3.4448219808507208 0.0 33 0.0 0.0 0.0 3.550650003413807 0.0 34 0.0 0.0 0.0 3.6677363262495626 0.0 35 0.0 0.0 0.0 3.8045791502089688 0.0 36 0.0 0.0 0.0 3.9186874710371145 0.0 37 0.0 0.0 0.0 4.0418750662787035 0.0 38 0.0 0.0 0.0 4.177773645699111 0.0 >>END_MODULE >>Kmer Content warn #Sequence Count PValue Obs/Exp Max Max Obs/Exp Position TCCGCGT 25 4.443302E-5 44.0 16 TATGCGA 25 4.443302E-5 44.0 13 TACGACG 20 7.857025E-4 44.0 1 TACTACG 20 7.857025E-4 44.0 1 GCGTAAG 40 8.314601E-9 44.0 1 TAATCGC 25 4.443302E-5 44.0 39 TTATCGG 35 1.4463694E-7 43.999996 2 CGTTTTT 9595 0.0 43.037 1 GCCGATT 125 0.0 42.24 9 CACGACG 210 0.0 41.90476 26 TATAGCG 75 0.0 41.066666 1 TAATGCG 75 0.0 41.066666 1 CGGTCTA 215 0.0 40.930233 31 ACGGGTA 70 0.0 40.85714 5 ATGGTCG 60 3.6379788E-12 40.333332 44 TACGGGA 510 0.0 40.11765 4 TAATACG 55 7.8216544E-11 40.0 1 CACATCG 55 7.8216544E-11 40.0 28 CGTAAAT 55 7.8216544E-11 40.0 16 TCGATCC 50 1.3478711E-9 39.6 14 >>END_MODULE