##FastQC 0.11.5 >>Basic Statistics pass #Measure Value Filename SRR1545931_1.fastq.gz File type Conventional base calls Encoding Illumina 1.5 Total Sequences 1844291 Sequences flagged as poor quality 0 Sequence length 50 %GC 45 >>END_MODULE >>Per base sequence quality pass #Base Mean Median Lower Quartile Upper Quartile 10th Percentile 90th Percentile 1 31.558512187068093 31.0 31.0 33.0 30.0 34.0 2 31.94565499696089 31.0 31.0 34.0 30.0 34.0 3 31.964661216695195 33.0 31.0 34.0 30.0 34.0 4 35.73631059306801 37.0 35.0 37.0 35.0 37.0 5 35.679651421603204 37.0 35.0 37.0 33.0 37.0 6 35.7388926151025 37.0 35.0 37.0 33.0 37.0 7 36.01870258001584 37.0 35.0 37.0 35.0 37.0 8 36.018949829500876 37.0 35.0 37.0 35.0 37.0 9 37.848618791719964 39.0 38.0 39.0 35.0 39.0 10 37.35343392121959 39.0 37.0 39.0 34.0 39.0 11 37.006581390897644 39.0 37.0 39.0 33.0 39.0 12 35.948342750683054 37.0 35.0 39.0 32.0 39.0 13 35.49614458889622 37.0 35.0 39.0 31.0 39.0 14 36.352173816387975 38.0 35.0 41.0 31.0 41.0 15 36.6630390757207 38.0 35.0 41.0 32.0 41.0 16 36.91686886722323 38.0 35.0 41.0 32.0 41.0 17 36.883756955925065 38.0 35.0 41.0 32.0 41.0 18 36.77506152770902 38.0 35.0 40.0 32.0 41.0 19 36.58334069840389 37.0 35.0 40.0 32.0 41.0 20 36.295034243511466 36.0 35.0 40.0 32.0 41.0 21 36.13097933026838 35.0 35.0 40.0 31.0 41.0 22 36.01872697963608 35.0 35.0 40.0 31.0 41.0 23 36.00507349436721 35.0 35.0 40.0 31.0 41.0 24 36.01845370388946 35.0 35.0 40.0 31.0 41.0 25 35.97947070174934 35.0 35.0 40.0 31.0 41.0 26 35.73999222465435 35.0 35.0 40.0 31.0 41.0 27 35.716397249674806 35.0 35.0 40.0 31.0 41.0 28 35.74146596171645 36.0 35.0 40.0 31.0 41.0 29 35.6885198702374 36.0 35.0 40.0 31.0 41.0 30 35.57141850174403 36.0 35.0 40.0 30.0 41.0 31 35.255490050105976 35.0 34.0 40.0 30.0 41.0 32 34.92214623397284 35.0 34.0 40.0 29.0 41.0 33 34.5660684783475 35.0 34.0 40.0 26.0 41.0 34 34.263522947300615 35.0 34.0 40.0 23.0 41.0 35 33.97220232598869 35.0 33.0 40.0 23.0 41.0 36 33.732984111509516 35.0 33.0 40.0 21.0 41.0 37 33.618160040904606 35.0 33.0 40.0 21.0 41.0 38 33.55949955836687 35.0 33.0 40.0 21.0 41.0 39 33.50468770926063 35.0 33.0 40.0 20.0 41.0 40 33.26885670428365 35.0 33.0 40.0 18.0 41.0 41 33.25060416170767 35.0 33.0 40.0 18.0 41.0 42 33.205422571600685 35.0 33.0 40.0 18.0 41.0 43 33.12022451988325 35.0 33.0 40.0 18.0 41.0 44 32.9717848213758 35.0 33.0 39.0 18.0 41.0 45 32.862507055556854 35.0 32.0 39.0 18.0 41.0 46 32.861358104550746 35.0 33.0 39.0 18.0 41.0 47 32.815876128008 35.0 33.0 39.0 18.0 41.0 48 32.7496832115973 35.0 32.0 39.0 18.0 41.0 49 32.73969509150129 35.0 32.0 39.0 18.0 41.0 50 32.5468681460789 35.0 32.0 39.0 18.0 41.0 >>END_MODULE >>Per sequence quality scores pass #Quality Count 10 2.0 11 2.0 12 0.0 13 5.0 14 21.0 15 60.0 16 152.0 17 395.0 18 958.0 19 1884.0 20 3287.0 21 5445.0 22 8277.0 23 12393.0 24 18892.0 25 29266.0 26 42315.0 27 51339.0 28 50765.0 29 48136.0 30 50654.0 31 58316.0 32 71819.0 33 95283.0 34 186407.0 35 335344.0 36 105444.0 37 130156.0 38 197161.0 39 340113.0 >>END_MODULE >>Per base sequence content fail #Base G A T C 1 32.39689398256566 21.462556613896613 28.172343735343286 17.968205668194447 2 35.33108386908573 23.821566119446445 28.74155976470091 12.105790246766915 3 28.157975070094686 22.954132509457565 36.38471369214511 12.503178728302638 4 24.21890037960387 26.290211251911984 35.603708959161004 13.88717940932315 5 21.507018144099817 31.192745613354944 34.25023491412147 13.050001328423768 6 19.019070200960694 39.36255178819395 31.886237041768357 9.732140969077006 7 83.50770024903879 3.764861402023867 11.469502372456407 1.257935976480935 8 85.73424692741004 2.0214272042752475 11.119937146578279 1.1243887217364288 9 83.20189167544602 3.1087827246351036 11.978207343635033 1.7111182562838512 10 55.090763876199574 18.997435871020354 16.84533514505032 9.066465107729746 11 50.043078885056644 16.4462658007874 22.573173105545706 10.937482208610247 12 44.18115145603379 18.60752993968956 25.808562748503356 11.402755855773302 13 20.93964564160428 40.49198309811196 26.002024626265595 12.566346634018167 14 14.30462980082861 41.91589071355876 31.14589834250669 12.63358114310594 15 12.160391174711583 20.47144404001321 54.27489479697076 13.09326998830445 16 14.815503627139101 14.31194968689865 52.34710791301372 18.525438772948522 17 15.694974383109825 15.0971294660116 32.22062028172344 36.98727586915514 18 21.444717780437035 20.35616938975465 38.226125920475674 19.972986909332636 19 28.985664409792168 21.569914942923866 29.373455707369388 20.070964939914578 20 30.93340476096234 20.986655576587427 27.9811591554695 20.09878050698073 21 21.80279576270773 25.858446416536218 32.3691868582561 19.96957096249995 22 21.41728176301896 21.376398843783328 29.70848960386403 27.49782978933368 23 18.10750038903839 28.06466007804625 28.702791479218842 25.125048053696514 24 18.9807899078833 21.227994931385556 43.84340649062431 15.947808670106834 25 16.36596393953015 21.70172711356288 40.777729761734996 21.154579185171972 26 15.46399131156634 31.4114204320251 32.17756850735594 20.947019749052618 27 16.158241839275906 32.543779696371125 33.4272086129575 17.87076985139547 28 14.071098324505188 25.608594305345523 42.98909445418321 17.33121291596608 29 14.751197072479345 22.170199822045436 42.236067952400134 20.842535153075083 30 18.209707687127466 28.089873018954165 35.809207982905086 17.891211311013283 31 29.43998533853931 23.40172998729593 28.9325816804398 18.22570299372496 32 30.83016725668563 23.621868783180094 29.430062826311033 16.117901133823242 33 28.671722629454898 25.19732515096587 27.776798780669644 18.354153438909588 34 18.981061014774784 25.559469736608808 31.14904318244789 24.310426066168517 35 19.717983767203766 24.942593115728485 33.924798201585325 21.414624915482428 36 32.3278159466158 21.953476972993958 27.797023354774275 17.92168372561597 37 20.503814202856276 31.67775584221796 29.738474026062043 18.07995592886372 38 21.418040862315113 31.409360019649828 25.77570459325562 21.39689452477944 39 21.25228610886243 30.459835242919908 27.40597877449925 20.88189987371841 40 25.180733409207118 24.78925505790572 26.76893180089259 23.26107973199457 41 18.246903552638926 22.97598372491109 28.43716094694384 30.33995177550614 42 22.940143393857042 23.934509250438243 25.474125287169976 27.651222068534736 43 23.198182933170525 24.830409084032834 26.313363780444625 25.658044202352016 44 20.337951006647 28.99970774677098 29.352634698103497 21.30970654847852 45 17.50493821202836 36.5948757544227 23.67061380226873 22.229572231280205 46 22.10350752674063 31.482450437593634 27.0996822085018 19.314359827163933 47 21.544159788232985 26.507584757503018 28.644666161684896 23.3035892925791 48 22.99382255837067 23.433612157734327 31.828165945612703 21.7443993382823 49 21.296584974930745 22.74163892791322 33.70422563467479 22.257550462481245 50 19.05973623468314 32.47990691273774 27.77880497166662 20.6815518809125 >>END_MODULE >>Per sequence GC content fail #GC Content Count 0 736.0 1 1465.0 2 2194.0 3 19392.0 4 36590.0 5 26403.0 6 16216.0 7 16908.5 8 17601.0 9 18505.5 10 19410.0 11 19134.0 12 18858.0 13 17728.0 14 16598.0 15 15224.5 16 13851.0 17 12634.5 18 11418.0 19 10276.0 20 9134.0 21 8435.0 22 7736.0 23 8411.5 24 9087.0 25 8727.5 26 8368.0 27 9515.0 28 10662.0 29 12206.0 30 13750.0 31 18512.5 32 23275.0 33 26539.5 34 29804.0 35 32384.0 36 34964.0 37 38177.5 38 41391.0 39 56274.0 40 71157.0 41 109465.0 42 147773.0 43 172538.0 44 197303.0 45 189503.0 46 181703.0 47 171719.5 48 161736.0 49 154734.0 50 147732.0 51 134189.0 52 120646.0 53 110726.5 54 100807.0 55 90318.5 56 79830.0 57 75390.0 58 70950.0 59 64604.5 60 58259.0 61 53506.0 62 48753.0 63 43408.0 64 38063.0 65 32929.0 66 27795.0 67 23700.0 68 19605.0 69 15187.5 70 10770.0 71 9669.5 72 8569.0 73 7125.5 74 5682.0 75 4145.5 76 2609.0 77 2130.5 78 1652.0 79 1146.5 80 641.0 81 519.0 82 397.0 83 257.5 84 118.0 85 79.5 86 41.0 87 36.0 88 31.0 89 23.0 90 15.0 91 11.5 92 8.0 93 5.0 94 2.0 95 1.5 96 1.0 97 0.5 98 0.0 99 0.0 100 0.0 >>END_MODULE >>Per base N content pass #Base N-Count 1 0.0 2 0.0 3 0.0 4 0.0 5 0.0 6 0.0 7 0.0 8 0.0 9 0.0 10 0.0 11 0.0 12 0.0 13 0.0 14 0.0 15 0.0 16 0.0 17 0.0 18 0.0 19 0.0 20 0.0 21 0.0 22 0.0 23 0.0 24 0.0 25 0.0 26 0.0 27 0.0 28 0.0 29 0.0 30 0.0 31 0.0 32 0.0 33 0.0 34 0.0 35 0.0 36 0.0 37 0.0 38 0.0 39 0.0 40 0.0 41 0.0 42 0.0 43 0.0 44 0.0 45 0.0 46 0.0 47 0.0 48 0.0 49 0.0 50 0.0 >>END_MODULE >>Sequence Length Distribution pass #Length Count 50 1844291.0 >>END_MODULE >>Sequence Duplication Levels fail #Total Deduplicated Percentage 17.95021077763028 #Duplication Level Percentage of deduplicated Percentage of total 1 80.80974261724586 14.505519128656156 2 7.2139743141174275 2.589847189656373 3 2.4621264962520857 1.3258706870673982 4 1.2766940139422382 0.9166770659520811 5 0.8531912811136009 0.7657481664812772 6 0.606548790347432 0.6532607180191848 7 0.46938761911888743 0.5897924689715849 8 0.37809546882054906 0.5429514687516634 9 0.29491468231991264 0.4764402638154274 >10 2.99773532832772 12.086626341835661 >50 1.0668455915638306 14.025046835695129 >100 1.562483165253881 49.116238103880264 >500 0.0073427836236691245 0.8586514884647517 >1k 6.118986353057604E-4 0.3088619105293101 >5k 0.0 0.0 >10k+ 3.059493176528802E-4 1.238468162223768 >>END_MODULE >>Overrepresented sequences fail #Sequence Count Percentage Possible Source CGTTTTTTTTTTTTTTTTTTTTTTTTTTTTTTTTTTTTTTTTTTTTTTTT 22551 1.2227463019664466 No Hit GACCAGAAAAATGGTCCTGCCAAGCGGCTACAGTGTTCTTCTTTCAGATA 4289 0.23255549151408322 No Hit >>END_MODULE >>Adapter Content pass #Position Illumina Universal Adapter Illumina Small RNA 3' Adapter Illumina Small RNA 5' Adapter Nextera Transposase Sequence SOLID Small RNA Adapter 1 0.0 0.0 0.0 0.020224574104628825 0.0 2 0.0 0.0 0.0 0.09136302242975756 0.0 3 0.0 0.0 0.0 0.1311072927211595 0.0 4 0.0 0.0 0.0 0.19319077087075737 0.0 5 0.0 0.0 0.0 0.32999130831305906 0.0 6 0.0 0.0 0.0 0.4634843416792686 0.0 7 0.0 0.0 0.0 0.5528953944903489 0.0 8 0.0 0.0 0.0 0.8084407504021871 0.0 9 0.0 0.0 0.0 0.9239322861739281 0.0 10 0.0 0.0 0.0 1.128075775460597 0.0 11 0.0 0.0 0.0 1.2943185213179482 0.0 12 0.0 0.0 0.0 1.4599106106357402 0.0 13 0.0 0.0 0.0 1.5218314246504483 0.0 14 0.0 0.0 0.0 1.5447128462916102 0.0 15 0.0 0.0 0.0 1.5768661236214891 0.0 16 0.0 0.0 0.0 1.6593368400106057 0.0 17 0.0 0.0 0.0 1.756176221648319 0.0 18 0.0 0.0 0.0 1.9281122122268124 0.0 19 0.0 0.0 0.0 1.9942622937486547 0.0 20 0.0 0.0 0.0 2.0676238185839435 0.0 21 0.0 0.0 0.0 2.161806352685124 0.0 22 0.0 0.0 0.0 2.254416466815703 0.0 23 0.0 0.0 0.0 2.362642337895701 0.0 24 0.0 0.0 0.0 2.4368714047837354 0.0 25 0.0 0.0 0.0 2.4992259898248164 0.0 26 0.0 0.0 0.0 2.5675991478568188 0.0 27 0.0 0.0 0.0 2.6518591697297227 0.0 28 0.0 0.0 0.0 2.7192563429523866 0.0 29 0.0 0.0 0.0 2.804709235147816 0.0 30 0.0 0.0 0.0 2.914561747576711 0.0 31 0.0 0.0 0.0 3.010370923026789 0.0 32 5.4221378296592024E-5 0.0 0.0 3.0928416394159055 0.0 33 1.0844275659318405E-4 0.0 0.0 3.176884775775623 0.0 34 1.0844275659318405E-4 0.0 0.0 3.273181943630371 0.0 35 1.0844275659318405E-4 0.0 0.0 3.401144396410328 0.0 36 1.0844275659318405E-4 0.0 0.0 3.5007490683411673 0.0 37 1.0844275659318405E-4 0.0 0.0 3.6066976415327083 0.0 38 1.0844275659318405E-4 0.0 0.0 3.720074543550882 0.0 >>END_MODULE >>Kmer Content fail #Sequence Count PValue Obs/Exp Max Max Obs/Exp Position TGATCGC 30 2.5285535E-6 44.0 38 ACAACGT 20 7.857721E-4 44.0 28 CGGAATA 20 7.857721E-4 44.0 20 AACCGTA 20 7.857721E-4 44.0 20 GTCGATC 20 7.857721E-4 44.0 23 GTTTACG 50 2.7284841E-11 44.0 1 TCTTACG 25 4.4438915E-5 44.0 1 ACTTACG 30 2.5285535E-6 44.0 1 GTAATCG 25 4.4438915E-5 44.0 1 TACGCTA 20 7.857721E-4 44.0 1 GTTCGTA 25 4.4438915E-5 44.0 30 CATACGT 20 7.857721E-4 44.0 38 TTAACGC 20 7.857721E-4 44.0 29 TCCGTCG 35 1.446715E-7 44.0 4 CGTACCC 35 1.446715E-7 44.0 12 ACGTCGG 30 2.5285535E-6 44.0 2 CGTCGGA 35 1.446715E-7 44.0 38 ATACGTC 20 7.857721E-4 44.0 39 TATGTCG 20 7.857721E-4 44.0 22 CGATACA 30 2.5285535E-6 44.0 20 >>END_MODULE