##FastQC 0.11.5 >>Basic Statistics pass #Measure Value Filename SRR1545930_1.fastq.gz File type Conventional base calls Encoding Illumina 1.5 Total Sequences 1410599 Sequences flagged as poor quality 0 Sequence length 50 %GC 42 >>END_MODULE >>Per base sequence quality pass #Base Mean Median Lower Quartile Upper Quartile 10th Percentile 90th Percentile 1 31.59694215010786 31.0 31.0 33.0 30.0 34.0 2 31.987236627843917 31.0 31.0 34.0 30.0 34.0 3 31.974805029636347 33.0 31.0 34.0 30.0 34.0 4 35.755764749585104 37.0 35.0 37.0 35.0 37.0 5 35.69977222442381 37.0 35.0 37.0 33.0 37.0 6 35.77203088900531 37.0 35.0 37.0 33.0 37.0 7 36.06960659974947 37.0 35.0 37.0 35.0 37.0 8 36.0764086746127 37.0 35.0 37.0 35.0 37.0 9 37.91056423547727 39.0 38.0 39.0 35.0 39.0 10 37.43730996548275 39.0 37.0 39.0 35.0 39.0 11 37.01823835122526 39.0 37.0 39.0 33.0 39.0 12 35.96996453279777 37.0 35.0 39.0 32.0 39.0 13 35.50827698020486 37.0 35.0 39.0 31.0 39.0 14 36.426946283103845 38.0 35.0 41.0 31.0 41.0 15 36.740402481499 38.0 35.0 41.0 32.0 41.0 16 36.991471708118326 38.0 35.0 41.0 33.0 41.0 17 36.94361544280125 38.0 35.0 41.0 33.0 41.0 18 36.80715851918227 38.0 35.0 40.0 32.0 41.0 19 36.604441800965404 37.0 35.0 40.0 32.0 41.0 20 36.31852638489039 36.0 35.0 40.0 32.0 41.0 21 36.15310020778407 35.0 35.0 40.0 32.0 41.0 22 36.036254810899486 35.0 35.0 40.0 31.0 41.0 23 36.00613143777927 35.0 35.0 40.0 32.0 41.0 24 36.01021693620937 35.0 35.0 40.0 32.0 41.0 25 35.961312180144745 35.0 35.0 40.0 32.0 41.0 26 35.732345620548436 35.0 35.0 40.0 31.0 41.0 27 35.68939507258973 35.0 35.0 40.0 31.0 41.0 28 35.743087156590924 36.0 35.0 40.0 31.0 41.0 29 35.73767952479762 36.0 35.0 40.0 31.0 41.0 30 35.61723920121877 36.0 35.0 40.0 31.0 41.0 31 35.27163424899635 35.0 35.0 40.0 30.0 41.0 32 34.88406910822991 35.0 34.0 40.0 29.0 41.0 33 34.484409814553956 35.0 34.0 40.0 25.0 41.0 34 34.15918698368566 35.0 34.0 40.0 23.0 41.0 35 33.84750095526794 35.0 34.0 40.0 22.0 41.0 36 33.61129633581195 35.0 33.0 40.0 20.0 41.0 37 33.49910002771872 35.0 33.0 40.0 19.0 41.0 38 33.47812241466214 35.0 33.0 40.0 20.0 41.0 39 33.41191791572233 35.0 33.0 40.0 18.0 41.0 40 33.23950747164857 35.0 33.0 40.0 18.0 41.0 41 33.229296915707444 35.0 33.0 40.0 18.0 41.0 42 33.16642646138272 35.0 33.0 40.0 18.0 41.0 43 33.07528574740235 35.0 33.0 40.0 18.0 41.0 44 32.947255031373196 35.0 33.0 40.0 17.0 41.0 45 32.84677218685112 35.0 33.0 40.0 17.0 41.0 46 32.808602586560745 35.0 33.0 39.0 17.0 41.0 47 32.76800352190807 35.0 33.0 39.0 17.0 41.0 48 32.708663482676506 35.0 33.0 39.0 17.0 41.0 49 32.69941776507711 35.0 33.0 39.0 15.0 41.0 50 32.48205407773577 35.0 32.0 39.0 15.0 41.0 >>END_MODULE >>Per sequence quality scores pass #Quality Count 8 1.0 9 0.0 10 0.0 11 0.0 12 2.0 13 4.0 14 8.0 15 25.0 16 82.0 17 240.0 18 582.0 19 1244.0 20 2342.0 21 3916.0 22 6229.0 23 9551.0 24 14697.0 25 24159.0 26 34920.0 27 40777.0 28 39499.0 29 36165.0 30 37576.0 31 42683.0 32 52719.0 33 70146.0 34 140898.0 35 269908.0 36 74282.0 37 89750.0 38 144297.0 39 273897.0 >>END_MODULE >>Per base sequence content fail #Base G A T C 1 30.161016702833336 21.088133480882945 28.7493469086537 20.00150290763002 2 34.55617081821269 23.902257126227937 30.00689777888684 11.534674276672535 3 26.08558491818015 23.962444323298115 38.23829451176415 11.713676246757583 4 23.445571703935702 26.25650521516037 37.588286961780064 12.709636119123862 5 20.45237519663632 31.23864400868 36.18484062444394 12.124140170239734 6 18.89431369226832 38.22454148911207 32.58013085221243 10.301013966407178 7 82.9763809558918 3.4797982984533524 12.427273803540198 1.116546942114662 8 85.43406028219216 1.9314489801850137 11.618610249971821 1.0158804876509908 9 82.66998629660166 3.285909035806774 12.646329679802692 1.3977749877888757 10 53.92900462853015 23.15626198515666 16.02056998480787 6.894163401505319 11 48.58545908511207 16.239696752939707 25.989384651484936 9.185459510463286 12 43.06879559676421 19.404522475912714 27.119330156904976 10.4073517704181 13 19.26791384369335 43.82542451823658 26.60649837409498 10.300163263975092 14 12.21027379148858 44.99180844449769 31.51916313566081 11.278754628352921 15 10.342485709971436 20.726372271637793 57.63551512513479 11.295626893255987 16 12.515959532085304 15.851209308953147 55.238235671512605 16.39459548744895 17 13.739694980642975 15.498664042722277 33.606219769048465 37.15542120758628 18 19.29747575320839 20.67199820785354 41.325139178462486 18.705386860475585 19 27.191001836808336 21.29003352476501 31.882909317247492 19.636055321179157 20 30.46443390361116 19.985906696375086 30.599624698443712 18.950034701570043 21 19.76068322747996 26.95117464282904 33.710927060064556 19.57721506962645 22 20.737644078862953 22.169588947674 30.78933134079919 26.303435632663852 23 16.211481788942145 29.13634562338411 30.09111731966349 24.561055268010257 24 17.255151889374655 21.215384386349346 47.057313949605806 14.472149774670193 25 13.638319607485899 23.192842189736417 43.76615891546783 19.40267928730986 26 14.039354912345747 34.2842296074221 33.22857878107102 18.447836699161137 27 14.023404241744112 34.92402872822113 34.78288301636397 16.269684013670787 28 11.775919308038642 26.392475820555667 46.23993069610853 15.59167417529716 29 11.651078726129821 21.555169116098906 46.23043118561689 20.563320972154383 30 15.86907406002698 29.280752361230938 37.42239998752303 17.42777359121905 31 27.836046955938578 24.882053652384553 29.55389873380032 17.728000657876546 32 28.466984593070038 25.294927899424284 30.994279735062907 15.243807772442771 33 26.68284891737482 27.148254039595944 29.0518425151301 17.117054527899143 34 17.966622690077052 26.82271857558385 31.58083906198714 23.62981967235196 35 18.188656024851856 25.15080472905482 35.11444428927002 21.546094956823307 36 31.13684328430688 22.241827762532086 29.72481903078054 16.896509922380492 37 18.65753484867067 31.314852768221158 32.120042620191846 17.907569762916324 38 18.936919705742028 32.22871985589101 26.586861326287625 22.247499112079336 39 19.177597602153412 31.559146149968914 30.20135417648814 19.06190207138953 40 23.21169942698102 25.483074920654275 27.39736806845886 23.907857583905844 41 16.43635079849057 23.94755703073659 29.720494626750764 29.895597544022078 42 21.429477831758 24.57409937196893 26.49165354576318 27.50476925050989 43 21.914732677394497 26.118549637423534 27.030573536490525 24.93614414869144 44 18.613652781548833 30.954509396362823 30.17604577913355 20.255792042954802 45 16.077070804672342 39.22829946710582 23.293366860461408 21.401262867760433 46 21.939686615402394 32.896521265079585 27.34972873226197 17.814063387256052 47 20.903389269381307 27.91544584960006 27.692561812393173 23.48860306862546 48 23.3062691806814 22.84547202996741 32.63415045664998 21.214108332701215 49 21.114079905061608 21.64371306090533 35.178317863545914 22.063889170487148 50 19.072535851790622 33.22631024125212 27.78862029534971 19.912533611607554 >>END_MODULE >>Per sequence GC content fail #GC Content Count 0 509.0 1 947.0 2 1385.0 3 12848.0 4 24311.0 5 18752.0 6 13193.0 7 14106.0 8 15019.0 9 16291.0 10 17563.0 11 17484.0 12 17405.0 13 16545.5 14 15686.0 15 14268.5 16 12851.0 17 11741.0 18 10631.0 19 9882.0 20 9133.0 21 8395.0 22 7657.0 23 7528.5 24 7400.0 25 8765.0 26 10130.0 27 9655.5 28 9181.0 29 11685.0 30 14189.0 31 17738.5 32 21288.0 33 23209.0 34 25130.0 35 31894.5 36 38659.0 37 39654.0 38 40649.0 39 55986.5 40 71324.0 41 99240.5 42 127157.0 43 148459.0 44 169761.0 45 164892.0 46 160023.0 47 145744.0 48 131465.0 49 119307.0 50 107149.0 51 100300.5 52 93452.0 53 84391.0 54 75330.0 55 62403.0 56 49476.0 57 42563.5 58 35651.0 59 30770.5 60 25890.0 61 22411.0 62 18932.0 63 15540.0 64 12148.0 65 9966.0 66 7784.0 67 6522.5 68 5261.0 69 4037.5 70 2814.0 71 2372.0 72 1930.0 73 1709.5 74 1489.0 75 1199.5 76 910.0 77 614.0 78 318.0 79 262.5 80 207.0 81 161.0 82 115.0 83 70.0 84 25.0 85 15.5 86 6.0 87 6.0 88 6.0 89 5.0 90 4.0 91 3.0 92 2.0 93 1.0 94 0.0 95 0.0 96 0.0 97 0.0 98 0.0 99 0.5 100 1.0 >>END_MODULE >>Per base N content pass #Base N-Count 1 0.0 2 0.0 3 0.0 4 0.0 5 0.0 6 0.0 7 0.0 8 0.0 9 0.0 10 0.0 11 0.0 12 0.0 13 0.0 14 0.0 15 0.0 16 0.0 17 0.0 18 0.0 19 0.0 20 0.0 21 0.0 22 0.0 23 0.0 24 0.0 25 0.0 26 0.0 27 0.0 28 0.0 29 0.0 30 0.0 31 0.0 32 0.0 33 0.0 34 0.0 35 0.0 36 0.0 37 0.0 38 0.0 39 0.0 40 0.0 41 0.0 42 0.0 43 0.0 44 0.0 45 0.0 46 0.0 47 0.0 48 0.0 49 0.0 50 0.0 >>END_MODULE >>Sequence Length Distribution pass #Length Count 50 1410599.0 >>END_MODULE >>Sequence Duplication Levels fail #Total Deduplicated Percentage 19.185394017234614 #Duplication Level Percentage of deduplicated Percentage of total 1 81.31449882056316 15.600506991864634 2 6.91155184450511 2.652016908147504 3 2.3086062935016445 1.328745641144899 4 1.194482067524936 0.9166643644794777 5 0.7571938077884678 0.7263530774915985 6 0.5571244849749362 0.6413191656535833 7 0.42750170609649507 0.5741252072150901 8 0.3535367486416646 0.5426193457809897 9 0.29096695179773463 0.5024084054609925 >10 3.316770229528215 14.691513473307097 >50 1.1638996577736027 16.272652922378324 >100 1.399375011664673 43.81158525337941 >500 0.003743646366144123 0.4256250571099023 >1k 3.743646366144123E-4 0.31135413813220153 >5k 0.0 0.0 >10k+ 3.743646366144123E-4 1.0025100484542722 >>END_MODULE >>Overrepresented sequences warn #Sequence Count Percentage Possible Source CGTTTTTTTTTTTTTTTTTTTTTTTTTTTTTTTTTTTTTTTTTTTTTTTT 13958 0.9895087122562827 No Hit GACCAGAAAAATGGTCCTGCCAAGCGGCTACAGTGTTCTTCTTTCAGATA 4335 0.3073162535915593 No Hit >>END_MODULE >>Adapter Content pass #Position Illumina Universal Adapter Illumina Small RNA 3' Adapter Illumina Small RNA 5' Adapter Nextera Transposase Sequence SOLID Small RNA Adapter 1 0.0 0.0 0.0 0.04941163293040758 0.0 2 0.0 0.0 0.0 0.2018291520127265 0.0 3 0.0 0.0 0.0 0.27321726443872424 0.0 4 0.0 0.0 0.0 0.36863772057119 0.0 5 0.0 0.0 0.0 0.5720264937094099 0.0 6 0.0 0.0 0.0 0.7369209817956769 0.0 7 0.0 0.0 0.0 0.8396433004702257 0.0 8 0.0 0.0 0.0 1.0703963351739225 0.0 9 0.0 0.0 0.0 1.1639736027035323 0.0 10 0.0 0.0 0.0 1.3548854068378045 0.0 11 0.0 0.0 0.0 1.5635910701765703 0.0 12 0.0 0.0 0.0 1.7472719036381 0.0 13 0.0 0.0 0.0 1.8260327704755215 0.0 14 0.0 0.0 0.0 1.855807355598579 0.0 15 0.0 0.0 0.0 1.9115283649003012 0.0 16 0.0 0.0 0.0 2.0338877313822 0.0 17 0.0 0.0 0.0 2.1893536008461654 0.0 18 0.0 0.0 0.0 2.414506177871954 0.0 19 0.0 0.0 0.0 2.5044679600651922 0.0 20 0.0 0.0 0.0 2.6040001446194134 0.0 21 0.0 0.0 0.0 2.7179233786497794 0.0 22 0.0 0.0 0.0 2.8375179622273943 0.0 23 0.0 0.0 0.0 2.986887130928067 0.0 24 0.0 0.0 0.0 3.0876244772610786 0.0 25 0.0 0.0 0.0 3.1694336944801464 0.0 26 0.0 0.0 0.0 3.2578358555478912 0.0 27 0.0 0.0 0.0 3.345954449138274 0.0 28 0.0 0.0 0.0 3.437121393110303 0.0 29 0.0 0.0 0.0 3.543459197121223 0.0 30 0.0 0.0 0.0 3.676594127742895 0.0 31 0.0 0.0 0.0 3.7966849544058943 0.0 32 0.0 0.0 0.0 3.9060711087984608 0.0 33 0.0 0.0 0.0 4.007021130739495 0.0 34 0.0 0.0 0.0 4.120589905423157 0.0 35 0.0 0.0 0.0 4.266839831872843 0.0 36 0.0 0.0 0.0 4.385371037410349 0.0 37 0.0 0.0 0.0 4.510211619319168 0.0 38 0.0 0.0 0.0 4.617471017631517 0.0 >>END_MODULE >>Kmer Content warn #Sequence Count PValue Obs/Exp Max Max Obs/Exp Position CTTCGAA 20 7.85709E-4 44.000004 42 ATCTCGC 40 8.314601E-9 44.000004 11 TCGCAGA 20 7.85709E-4 44.000004 12 CGACGGA 20 7.85709E-4 44.000004 3 CGACCCA 20 7.85709E-4 44.000004 20 GTTAGTA 20 7.85709E-4 44.000004 18 ATCACGC 20 7.85709E-4 44.000004 24 ATATCGC 20 7.85709E-4 44.000004 36 AGTGCCG 20 7.85709E-4 44.000004 1 GTTCGGC 20 7.85709E-4 44.000004 32 GTTCGCT 20 7.85709E-4 44.000004 17 CTACGCG 20 7.85709E-4 44.000004 1 CGCTAGC 20 7.85709E-4 44.000004 20 ACGTGAC 20 7.85709E-4 44.000004 31 CGTACGA 20 7.85709E-4 44.000004 40 TGCTCGA 20 7.85709E-4 44.000004 42 CTCTACG 20 7.85709E-4 44.000004 40 TCGGTTA 40 8.314601E-9 44.000004 25 AATACGT 20 7.85709E-4 44.000004 33 CGCCAGT 40 8.314601E-9 44.000004 26 >>END_MODULE