##FastQC 0.11.5 >>Basic Statistics pass #Measure Value Filename SRR1545929_1.fastq.gz File type Conventional base calls Encoding Illumina 1.5 Total Sequences 694096 Sequences flagged as poor quality 0 Sequence length 50 %GC 46 >>END_MODULE >>Per base sequence quality pass #Base Mean Median Lower Quartile Upper Quartile 10th Percentile 90th Percentile 1 31.512777771374566 31.0 31.0 33.0 30.0 34.0 2 31.915765254374033 31.0 31.0 34.0 30.0 34.0 3 31.94381036628939 31.0 31.0 34.0 30.0 34.0 4 35.72648740231899 37.0 35.0 37.0 35.0 37.0 5 35.670724222585925 37.0 35.0 37.0 33.0 37.0 6 35.72470810954104 37.0 35.0 37.0 33.0 37.0 7 35.993894216362 37.0 35.0 37.0 35.0 37.0 8 35.98312049053733 37.0 35.0 37.0 35.0 37.0 9 37.78996997533483 39.0 38.0 39.0 35.0 39.0 10 37.27134142827505 39.0 37.0 39.0 34.0 39.0 11 36.96122582466979 39.0 37.0 39.0 33.0 39.0 12 36.19486353472718 38.0 35.0 39.0 32.0 39.0 13 35.89134932343653 38.0 35.0 39.0 32.0 39.0 14 36.850347790507364 39.0 35.0 41.0 31.0 41.0 15 37.03795440400175 39.0 35.0 41.0 32.0 41.0 16 37.20679560176114 39.0 35.0 41.0 32.0 41.0 17 37.144778243931675 39.0 35.0 41.0 32.0 41.0 18 37.00389571471381 38.0 35.0 40.0 32.0 41.0 19 36.837794771904754 38.0 35.0 40.0 32.0 41.0 20 36.59985506327655 38.0 35.0 40.0 32.0 41.0 21 36.473957492911644 37.0 35.0 40.0 31.0 41.0 22 36.36651558285885 37.0 35.0 40.0 31.0 41.0 23 36.30775569949978 37.0 35.0 40.0 31.0 41.0 24 36.32697206150158 37.0 35.0 40.0 31.0 41.0 25 36.29597923053871 37.0 35.0 40.0 31.0 41.0 26 36.073705942693806 37.0 35.0 40.0 31.0 41.0 27 36.06691581567968 37.0 35.0 40.0 31.0 41.0 28 36.049081106936214 37.0 35.0 40.0 31.0 41.0 29 35.969223277471706 37.0 35.0 40.0 31.0 41.0 30 35.8420232936078 36.0 35.0 40.0 30.0 41.0 31 35.57837964777207 36.0 35.0 40.0 30.0 41.0 32 35.295364041861646 36.0 34.0 40.0 29.0 41.0 33 34.99525714022268 36.0 34.0 40.0 27.0 41.0 34 34.70234809017773 36.0 34.0 40.0 24.0 41.0 35 34.41811795486503 36.0 34.0 40.0 23.0 41.0 36 34.21888470759088 36.0 33.0 40.0 22.0 41.0 37 34.117702738526084 36.0 33.0 40.0 22.0 41.0 38 34.02422431479219 36.0 33.0 40.0 22.0 41.0 39 33.92848107466402 36.0 33.0 40.0 21.0 41.0 40 33.761747654503125 36.0 33.0 40.0 21.0 41.0 41 33.713695223715455 36.0 33.0 40.0 20.0 41.0 42 33.67994917129619 35.0 33.0 40.0 20.0 41.0 43 33.58073955187755 35.0 33.0 40.0 20.0 41.0 44 33.43711100481778 35.0 33.0 40.0 19.0 41.0 45 33.33545359719693 35.0 33.0 40.0 20.0 41.0 46 33.294316636315436 35.0 33.0 40.0 20.0 41.0 47 33.245857921670776 35.0 33.0 40.0 20.0 41.0 48 33.12846637929047 35.0 33.0 40.0 19.0 41.0 49 33.08920091745234 35.0 33.0 39.0 18.0 41.0 50 32.938717410848064 35.0 32.0 39.0 18.0 41.0 >>END_MODULE >>Per sequence quality scores pass #Quality Count 11 2.0 12 3.0 13 6.0 14 11.0 15 24.0 16 57.0 17 135.0 18 324.0 19 682.0 20 1259.0 21 2024.0 22 3080.0 23 4618.0 24 6814.0 25 10001.0 26 14643.0 27 17475.0 28 18078.0 29 17802.0 30 18711.0 31 21363.0 32 26075.0 33 33944.0 34 62244.0 35 100712.0 36 45303.0 37 57430.0 38 87009.0 39 144267.0 >>END_MODULE >>Per base sequence content fail #Base G A T C 1 32.99586800673106 22.18468338673613 27.340598418662548 17.478850187870265 2 36.09947327170882 23.769478573569074 28.22001567506512 11.911032479656992 3 28.24623683179272 23.705222332357483 35.757445655932315 12.291095179917475 4 25.21682879601669 25.857518268366338 34.890274544155275 14.0353783914617 5 22.219548880846453 30.535401443028054 33.37045595998248 13.874593716143014 6 19.811092413729515 39.26891957308499 31.084605011410527 9.835383001774971 7 84.42261589174984 3.2616525667919136 10.91621331919504 1.3995182222632028 8 85.70802886056107 2.2927664184781356 10.762488186072243 1.2367165348885456 9 82.50861552292477 3.482515386920541 11.871844816855305 2.137024273299371 10 48.96282358636269 22.768176160070077 17.459976717917982 10.809023535649247 11 42.644101104170026 20.31217583734815 23.870185104077823 13.173537954404003 12 38.69219819736751 19.938164173255572 27.831884926580763 13.537752702796155 13 22.872340425531913 33.62978608146424 28.11830063852839 15.379572854475462 14 17.36171941633434 34.67848827827851 32.04715197897697 15.91264032641018 15 16.400036882506168 21.43882114289666 46.320249648463616 15.84089232613356 16 19.3329164841751 16.895069269956895 44.45480164127152 19.31721260459648 17 19.789913787141835 17.657643899402963 31.73840506212397 30.81403725133123 18 23.226614185933933 21.558112998778267 36.09154929577465 19.12372351951315 19 28.107783361379408 22.936452594453794 28.7741177012978 20.181646342868998 20 29.424604089347874 22.084265000806806 28.86214587031189 19.628985039533436 21 23.58765934395242 25.078375325603375 31.904664484451718 19.429300845992486 22 23.2655137041562 21.74944099951592 30.511053226066707 24.473992070261176 23 20.378881307484846 26.872363477098272 29.3152532214564 23.43350199396049 24 21.71457550540559 21.6336068785874 38.67346879970494 17.978348816302066 25 19.76052304004057 22.881993268942622 35.85296558401143 21.50451810700537 26 18.030647057467554 28.707268158871397 30.492611972983564 22.769472810677485 27 17.637473778843272 28.57673866439224 33.31599663447131 20.469790922293168 28 16.543676955349117 25.678868629123347 38.90153523431918 18.875919181208364 29 17.946364767985983 22.90864664253936 37.9219877365667 21.223000852907955 30 20.676102441160875 26.519242295013946 34.02022198658399 18.784433277241188 31 27.79975680597497 24.036876743274703 28.61304488139969 19.550321569350636 32 28.473726977248106 24.33280122634333 28.924385099467507 18.269086696941056 33 26.787793043037272 25.016136096447756 28.43209008552131 19.763980774993662 34 20.22068993338097 26.08644913671884 31.05175652935617 22.64110440054402 35 20.806920080219452 25.15271662709481 32.37304349830571 21.667319794380028 36 28.35962172379613 25.216396579147553 27.205602683202322 19.21837901385399 37 21.204559599824808 30.219018694820317 28.982734376800906 19.593687328553973 38 22.098095940619164 29.831752380074228 26.08284732947604 21.987304349830573 39 21.095640948802473 28.50599917014361 27.949447914985825 22.448911966068096 40 24.61316590212305 24.96499043359996 26.96154422443005 23.46029943984694 41 19.28450819483184 23.66344136834098 29.178816763099054 27.87323367372813 42 22.334374495746985 25.295348193909778 25.87365436481409 26.496622945529147 43 22.518066665129897 25.67901270141306 27.06369147783592 24.739229155621125 44 21.063512828196675 27.22000991217353 29.458605149719926 22.25787210990987 45 19.490531569120122 32.550540559231 25.26883889260275 22.690088979046127 46 22.365494110324796 29.12017934118623 27.893547866577535 20.620778681911435 47 21.975922638943317 26.835336898642264 29.28845577556995 21.900284686844472 48 21.984711048615754 24.745856480947882 31.337595952144948 21.931836518291416 49 21.854325626426316 24.16005855097854 31.81966183352159 22.165953989073557 50 21.15427837071529 28.94354671399922 28.542593531730482 21.359581383555014 >>END_MODULE >>Per sequence GC content fail #GC Content Count 0 212.0 1 702.0 2 1192.0 3 8383.5 4 15575.0 5 10917.0 6 6259.0 7 6195.0 8 6131.0 9 6205.0 10 6279.0 11 6076.5 12 5874.0 13 5513.0 14 5152.0 15 4751.5 16 4351.0 17 4019.0 18 3687.0 19 3380.5 20 3074.0 21 3063.5 22 3053.0 23 3108.0 24 3163.0 25 3581.0 26 3999.0 27 4761.5 28 5524.0 29 5845.0 30 6166.0 31 8075.0 32 9984.0 33 11554.0 34 13124.0 35 14618.0 36 16112.0 37 17577.0 38 19042.0 39 23203.5 40 27365.0 41 35658.0 42 43951.0 43 50432.0 44 56913.0 45 58324.5 46 59736.0 47 56057.5 48 52379.0 49 52375.0 50 52371.0 51 48684.5 52 44998.0 53 42103.0 54 39208.0 55 37158.5 56 35109.0 57 33310.5 58 31512.0 59 30987.5 60 30463.0 61 27924.0 62 25385.0 63 22010.0 64 18635.0 65 16073.0 66 13511.0 67 11193.0 68 8875.0 69 7387.0 70 5899.0 71 5162.5 72 4426.0 73 3424.5 74 2423.0 75 1956.0 76 1489.0 77 1154.5 78 820.0 79 550.0 80 280.0 81 239.0 82 198.0 83 153.0 84 108.0 85 75.5 86 43.0 87 27.5 88 12.0 89 9.0 90 6.0 91 12.0 92 18.0 93 12.5 94 7.0 95 4.0 96 1.0 97 1.5 98 2.0 99 1.0 100 0.0 >>END_MODULE >>Per base N content pass #Base N-Count 1 0.0 2 0.0 3 0.0 4 0.0 5 0.0 6 0.0 7 0.0 8 0.0 9 0.0 10 0.0 11 0.0 12 0.0 13 0.0 14 0.0 15 0.0 16 0.0 17 0.0 18 0.0 19 0.0 20 0.0 21 0.0 22 0.0 23 0.0 24 0.0 25 0.0 26 0.0 27 0.0 28 0.0 29 0.0 30 0.0 31 0.0 32 0.0 33 0.0 34 0.0 35 0.0 36 0.0 37 0.0 38 0.0 39 0.0 40 0.0 41 0.0 42 0.0 43 0.0 44 0.0 45 0.0 46 0.0 47 0.0 48 0.0 49 0.0 50 0.0 >>END_MODULE >>Sequence Length Distribution pass #Length Count 50 694096.0 >>END_MODULE >>Sequence Duplication Levels fail #Total Deduplicated Percentage 25.0379344406389 #Duplication Level Percentage of deduplicated Percentage of total 1 74.8389776788397 18.73813416727226 2 6.916714620904456 3.4636049444562853 3 2.993753162643713 2.248721862531859 4 1.890879651194802 1.893748829670144 5 1.2863241331547102 1.6103449657669646 6 1.022115315750463 1.5354993759919813 7 0.8184165950489496 1.434402273637656 8 0.6942287605792418 1.3905643355351243 9 0.5715896166481559 1.2880281013727801 >10 7.879029442791606 46.6387460643303 >50 1.0257514075850298 15.994467057295447 >100 0.060475139676214866 2.2702397191294845 >500 5.814917276559121E-4 0.07367031987940224 >1k 5.814917276559121E-4 0.16189999151362708 >5k 5.814917276559121E-4 1.2579279916166708 >10k+ 0.0 0.0 >>END_MODULE >>Overrepresented sequences fail #Sequence Count Percentage Possible Source CGTTTTTTTTTTTTTTTTTTTTTTTTTTTTTTTTTTTTTTTTTTTTTTTT 8640 1.2447845831124225 No Hit GACCAGAAAAATGGTCCTGCCAAGCGGCTACAGTGTTCTTCTTTCAGATA 1112 0.16020838615983954 No Hit >>END_MODULE >>Adapter Content pass #Position Illumina Universal Adapter Illumina Small RNA 3' Adapter Illumina Small RNA 5' Adapter Nextera Transposase Sequence SOLID Small RNA Adapter 1 0.0 0.0 0.0 0.03198404831608308 0.0 2 0.0 0.0 0.0 0.13341094027339157 0.0 3 0.0 0.0 0.0 0.18787026578456006 0.0 4 0.0 0.0 0.0 0.2439143864825615 0.0 5 0.0 0.0 0.0 0.39187662801687373 0.0 6 0.0 0.0 0.0 0.5143380742721468 0.0 7 0.0 0.0 0.0 0.5938659781932182 0.0 8 0.0 0.0 0.0 0.7447096655217722 0.0 9 0.0 0.0 0.0 0.8069488946773933 0.0 10 0.0 0.0 0.0 0.9296984855120906 0.0 11 0.0 0.0 0.0 1.1076277633065166 0.0 12 0.0 0.0 0.0 1.2498271132523455 0.0 13 0.0 0.0 0.0 1.3114900532491183 0.0 14 0.0 0.0 0.0 1.3414570895092321 0.0 15 0.0 0.0 0.0 1.3806447523109195 0.0 16 0.0 0.0 0.0 1.4748680297826238 0.0 17 0.0 0.0 0.0 1.5803289458518706 0.0 18 0.0 0.0 0.0 1.7304522717318642 0.0 19 0.0 0.0 0.0 1.8007595491113622 0.0 20 0.0 0.0 0.0 1.8697701758834513 0.0 21 0.0 0.0 0.0 1.9652901039625643 0.0 22 0.0 0.0 0.0 2.0616744657799497 0.0 23 0.0 0.0 0.0 2.174338996334801 0.0 24 0.0 0.0 0.0 2.261502731610613 0.0 25 0.0 0.0 0.0 2.3315218644106865 0.0 26 0.0 0.0 0.0 2.4073038887992437 0.0 27 0.0 0.0 0.0 2.4902895276734056 0.0 28 0.0 0.0 0.0 2.5689529978562042 0.0 29 0.0 0.0 0.0 2.6584218897674097 0.0 30 0.0 0.0 0.0 2.7692134805560036 0.0 31 0.0 0.0 0.0 2.869920011064752 0.0 32 0.0 0.0 0.0 2.9566515294714275 0.0 33 0.0 0.0 0.0 3.04799336114889 0.0 34 0.0 0.0 0.0 3.1540305663769854 0.0 35 0.0 0.0 0.0 3.289314446416634 0.0 36 0.0 0.0 0.0 3.3852665913648834 0.0 37 0.0 0.0 0.0 3.490871579723842 0.0 38 0.0 0.0 0.0 3.609587146446601 0.0 >>END_MODULE >>Kmer Content warn #Sequence Count PValue Obs/Exp Max Max Obs/Exp Position TGATCGG 25 4.441012E-5 44.0 2 TATCACG 20 7.8543235E-4 44.0 1 GGTACGC 20 7.8543235E-4 44.0 8 ACGTTAG 20 7.8543235E-4 44.0 1 TCGATTG 20 7.8543235E-4 44.0 1 CCGCTCG 20 7.8543235E-4 44.0 19 TATGACG 20 7.8543235E-4 44.0 1 GTTACGG 75 0.0 44.0 2 CCCGTAG 20 7.8543235E-4 44.0 35 TACGATG 40 8.303687E-9 44.0 1 TATAGCG 30 2.5262616E-6 44.0 1 ACGTAAG 20 7.8543235E-4 44.0 1 CGATAAC 20 7.8543235E-4 44.0 10 TGTTACG 35 1.4449688E-7 43.999996 1 TACGTAG 35 1.4449688E-7 43.999996 1 CGTTTTT 5315 0.0 43.047977 1 TCACGAC 60 3.6379788E-12 40.333332 25 TACGGGA 120 0.0 40.333332 4 CGGTCTA 60 3.6379788E-12 40.333332 31 ATACTCG 45 2.3486791E-8 39.11111 44 >>END_MODULE