##FastQC 0.11.5 >>Basic Statistics pass #Measure Value Filename SRR1545925_1.fastq.gz File type Conventional base calls Encoding Illumina 1.5 Total Sequences 1675358 Sequences flagged as poor quality 0 Sequence length 50 %GC 43 >>END_MODULE >>Per base sequence quality pass #Base Mean Median Lower Quartile Upper Quartile 10th Percentile 90th Percentile 1 31.516443052768423 31.0 31.0 33.0 30.0 34.0 2 31.901147098112762 31.0 31.0 34.0 30.0 34.0 3 31.893956993072525 31.0 31.0 34.0 30.0 34.0 4 35.67050445337653 37.0 35.0 37.0 33.0 37.0 5 35.613707637412425 37.0 35.0 37.0 33.0 37.0 6 35.67502826261611 37.0 35.0 37.0 33.0 37.0 7 36.01156230489244 37.0 35.0 37.0 35.0 37.0 8 36.01625861457671 37.0 35.0 37.0 35.0 37.0 9 37.827548500081775 39.0 38.0 39.0 35.0 39.0 10 37.31664038372694 39.0 37.0 39.0 34.0 39.0 11 36.94358937015253 39.0 37.0 39.0 33.0 39.0 12 35.86808431391977 37.0 35.0 39.0 32.0 39.0 13 35.38246989598641 37.0 35.0 39.0 31.0 39.0 14 36.297957809614424 38.0 35.0 41.0 31.0 41.0 15 36.617600536721106 38.0 35.0 41.0 32.0 41.0 16 36.86037133555933 38.0 35.0 41.0 32.0 41.0 17 36.81173576035689 38.0 35.0 41.0 32.0 41.0 18 36.680994151697725 38.0 35.0 40.0 32.0 41.0 19 36.480795746341975 37.0 35.0 40.0 32.0 41.0 20 36.21685395002143 36.0 35.0 40.0 32.0 41.0 21 36.032283846198844 35.0 35.0 40.0 31.0 41.0 22 35.91366681031756 35.0 35.0 40.0 31.0 41.0 23 35.894222607944094 35.0 35.0 40.0 31.0 41.0 24 35.90269124569197 35.0 35.0 40.0 31.0 41.0 25 35.858331174590745 35.0 35.0 40.0 31.0 41.0 26 35.60503963928903 35.0 35.0 40.0 31.0 41.0 27 35.582348966608926 35.0 35.0 40.0 31.0 41.0 28 35.59879798825087 36.0 35.0 40.0 31.0 41.0 29 35.602596579357964 36.0 35.0 40.0 31.0 41.0 30 35.475583129098375 36.0 35.0 40.0 30.0 41.0 31 35.166877168939415 35.0 34.0 40.0 29.0 41.0 32 34.780557946421006 35.0 34.0 40.0 27.0 41.0 33 34.41234231728383 35.0 34.0 40.0 24.0 41.0 34 34.096555482470016 35.0 34.0 40.0 23.0 41.0 35 33.80199933387372 35.0 33.0 40.0 22.0 41.0 36 33.5626552653224 35.0 33.0 40.0 20.0 41.0 37 33.43555466950944 35.0 33.0 40.0 19.0 41.0 38 33.39859659845836 35.0 33.0 40.0 19.0 41.0 39 33.346628601170615 35.0 33.0 40.0 18.0 41.0 40 33.15526233796 35.0 33.0 40.0 18.0 41.0 41 33.160881435490204 35.0 33.0 40.0 18.0 41.0 42 33.1320523732838 35.0 33.0 40.0 18.0 41.0 43 32.9865843598801 35.0 33.0 40.0 18.0 41.0 44 32.86705468323785 35.0 33.0 40.0 17.0 41.0 45 32.76454704009531 35.0 32.0 40.0 17.0 41.0 46 32.75246962141823 35.0 32.0 39.0 17.0 41.0 47 32.69349774794402 35.0 32.0 39.0 17.0 41.0 48 32.6118155045071 35.0 32.0 39.0 15.0 41.0 49 32.60461704304394 35.0 32.0 39.0 15.0 41.0 50 32.392683832351054 35.0 32.0 39.0 15.0 41.0 >>END_MODULE >>Per sequence quality scores pass #Quality Count 9 1.0 10 1.0 11 2.0 12 1.0 13 3.0 14 13.0 15 38.0 16 118.0 17 352.0 18 911.0 19 1810.0 20 3356.0 21 5374.0 22 8455.0 23 12609.0 24 19123.0 25 29078.0 26 41712.0 27 49203.0 28 47432.0 29 43953.0 30 46514.0 31 53231.0 32 65118.0 33 86346.0 34 168022.0 35 305916.0 36 88903.0 37 109401.0 38 172386.0 39 315976.0 >>END_MODULE >>Per base sequence content fail #Base G A T C 1 31.497268046590637 22.43371267514167 26.965341139028197 19.103678139239495 2 33.86422484030279 24.549499271200542 29.12380518074346 12.462470707753209 3 26.369707250629414 23.52500182050642 38.44730499391772 11.65798593494644 4 23.200414478577116 26.242808999628735 37.04366469733633 13.513111824457818 5 21.327919167127266 31.96021387667591 34.64608758247491 12.065779373721915 6 18.58361018958336 38.285906653980824 32.974325487448056 10.156157668987763 7 83.24817740447116 3.5540463590468425 12.102667012065481 1.0951092244165128 8 85.36444151041151 2.1513013934932115 11.418216285713262 1.0660408103820198 9 82.42739760695923 3.527604249360435 12.412929057550686 1.6320690861296512 10 52.64021182338342 23.53276135608031 16.489789048072115 7.337237772464154 11 49.11935240109875 16.56839911230913 25.02032401433007 9.291924472262048 12 44.46822708937433 18.933386177760216 26.228304636979082 10.370082095886373 13 19.60631697822197 43.552900335331316 25.92884625256214 10.911936433884579 14 13.343357061595192 44.578412494523555 30.551141905192804 11.527088538688448 15 11.757367679027409 20.99270723033525 55.34828973867077 11.901635351966565 16 12.632583603026934 15.927879295052161 54.30761664074186 17.131920461179043 17 13.636667506288209 16.13147757076398 32.93916882242482 37.29268610052299 18 19.95746580730805 21.12629061967651 39.41097962345958 19.505263949555857 19 26.678715832675763 21.94730917212918 31.4738700623986 19.900104932796452 20 31.071030788643384 20.359708193711434 29.170362394186792 19.39889862345839 21 20.34204032809704 26.290858431451664 33.215229222649725 20.151872017801566 22 21.125037156237653 22.275776281845435 30.798253268853582 25.800933293063334 23 16.874602323801838 29.12887872323408 29.228678288461328 24.767840664502753 24 18.44513232395703 21.494391049554782 44.70238599750024 15.358090628987952 25 14.486635095305003 22.585083307567697 42.64730284512325 20.28097875200405 26 14.30625573757967 34.33463176228603 32.52683903977538 18.83227346035892 27 15.140704255448686 34.27965843718179 33.818742024092764 16.76089528327677 28 12.335811211693262 27.330278065941727 45.3830166448007 14.950894077564318 29 12.791355638615748 21.461502556468528 44.87178262795176 20.87535917696397 30 16.100320050998054 29.056476287456174 37.64681936636826 17.19638429517751 31 28.10473940495106 25.118392606236995 29.35772533392863 17.419142654883316 32 28.918595309181676 26.57814031389112 29.883344335956853 14.619920040970346 33 26.802331203241337 28.333944148056712 27.888964627261753 16.974760021440193 34 18.25759031800964 28.184781998832488 31.194526781738592 22.363100901419276 35 18.413676360515186 26.398895042134278 33.361048802703664 21.826379794646876 36 29.93312474110011 22.962793623810555 29.78145566499817 17.322625970091167 37 19.629237452532532 30.92586778467647 31.797979894446442 17.646914868344556 38 19.559043499956427 31.348762473453434 26.919559879142245 22.17263414744789 39 19.75130091598333 31.101830175998202 29.838637473304214 19.30823143471425 40 23.256880022060958 26.689579182479207 26.961521059976434 23.0920197354834 41 17.069724799117562 24.422959152610964 29.813926336938135 28.69338971133334 42 23.613878347195048 25.122391751494305 25.301278890840045 25.9624510104706 43 23.092855377775972 26.631979553026873 26.40193916762865 23.8732259015685 44 19.930546187740173 31.594262241264254 28.114946178667484 20.36024539232809 45 16.4597059255395 39.09003329437649 22.642802314490396 21.80745846559362 46 22.749227329323045 32.542059667247244 26.88135908862464 17.827353914805073 47 22.341016069401288 28.2836265442968 27.293927626214813 22.081429760087097 48 23.744835432188225 23.2026826505141 31.006566954644914 22.04591496265276 49 21.10468329753999 22.666856874769454 33.46466844698268 22.763791380707886 50 18.778434221223165 32.53907523048805 28.116438397047077 20.566052151241703 >>END_MODULE >>Per sequence GC content fail #GC Content Count 0 601.0 1 1213.0 2 1825.0 3 14950.5 4 28076.0 5 21943.5 6 15811.0 7 16574.5 8 17338.0 9 18508.0 10 19678.0 11 19441.0 12 19204.0 13 18150.5 14 17097.0 15 15856.0 16 14615.0 17 13367.0 18 12119.0 19 10981.0 20 9843.0 21 9033.5 22 8224.0 23 8530.5 24 8837.0 25 9071.0 26 9305.0 27 10673.5 28 12042.0 29 13461.5 30 14881.0 31 19229.5 32 23578.0 33 25738.5 34 27899.0 35 32546.5 36 37194.0 37 43947.0 38 50700.0 39 65176.0 40 79652.0 41 115829.0 42 152006.0 43 170518.0 44 189030.0 45 192338.0 46 195646.0 47 180129.0 48 164612.0 49 148833.5 50 133055.0 51 123922.0 52 114789.0 53 101553.0 54 88317.0 55 73639.5 56 58962.0 57 49594.0 58 40226.0 59 37076.5 60 33927.0 61 30665.0 62 27403.0 63 23074.5 64 18746.0 65 14838.0 66 10930.0 67 8774.5 68 6619.0 69 5834.0 70 5049.0 71 3978.5 72 2908.0 73 2409.0 74 1910.0 75 1683.5 76 1457.0 77 1085.5 78 714.0 79 458.0 80 202.0 81 161.5 82 121.0 83 100.0 84 79.0 85 74.0 86 69.0 87 48.5 88 28.0 89 26.0 90 24.0 91 14.0 92 4.0 93 4.5 94 5.0 95 3.0 96 1.0 97 0.5 98 0.0 99 0.0 100 0.0 >>END_MODULE >>Per base N content pass #Base N-Count 1 0.0 2 0.0 3 0.0 4 0.0 5 0.0 6 0.0 7 0.0 8 0.0 9 0.0 10 0.0 11 0.0 12 0.0 13 0.0 14 0.0 15 0.0 16 0.0 17 0.0 18 0.0 19 0.0 20 0.0 21 0.0 22 0.0 23 0.0 24 0.0 25 0.0 26 0.0 27 0.0 28 0.0 29 0.0 30 0.0 31 0.0 32 0.0 33 0.0 34 0.0 35 0.0 36 0.0 37 0.0 38 0.0 39 0.0 40 0.0 41 0.0 42 0.0 43 0.0 44 0.0 45 0.0 46 0.0 47 0.0 48 0.0 49 0.0 50 0.0 >>END_MODULE >>Sequence Length Distribution pass #Length Count 50 1675358.0 >>END_MODULE >>Sequence Duplication Levels fail #Total Deduplicated Percentage 20.04034185228973 #Duplication Level Percentage of deduplicated Percentage of total 1 81.44839263758699 16.32253631776761 2 7.016979597820014 2.8124533982171114 3 2.300157801209683 1.3828784595135941 4 1.198276661389402 0.9605549571145618 5 0.7650433998984629 0.7665865632901597 6 0.5683864514823072 0.6834395275149194 7 0.43968910796083693 0.6168064022584447 8 0.3471043519649821 0.556487189743659 9 0.27234256641494103 0.4912054318696803 >10 3.1544960117708554 14.635179317885335 >50 1.159482893945433 16.883809952655515 >100 1.3233125487603274 41.91849882889399 >500 0.0057325441008732525 0.6949765036761683 >1k 0.0 0.0 >5k 3.017128474143817E-4 0.3141119659472502 >10k+ 3.017128474143817E-4 0.9604751836519864 >>END_MODULE >>Overrepresented sequences warn #Sequence Count Percentage Possible Source CGTTTTTTTTTTTTTTTTTTTTTTTTTTTTTTTTTTTTTTTTTTTTTTTT 15885 0.9481555583940865 No Hit GACCAGAAAAATGGTCCTGCCAAGCGGCTACAGTGTTCTTCTTTCAGATA 5195 0.3100829792796525 No Hit >>END_MODULE >>Adapter Content warn #Position Illumina Universal Adapter Illumina Small RNA 3' Adapter Illumina Small RNA 5' Adapter Nextera Transposase Sequence SOLID Small RNA Adapter 1 0.0 0.0 0.0 0.05783838439306704 0.0 2 0.0 0.0 0.0 0.19189928361580033 0.0 3 0.0 0.0 0.0 0.26370483204186806 0.0 4 0.0 0.0 0.0 0.3701298468745188 0.0 5 0.0 0.0 0.0 0.6144955287168474 0.0 6 0.0 0.0 0.0 0.7956508399995702 0.0 7 0.0 0.0 0.0 0.9243994417909486 0.0 8 0.0 0.0 0.0 1.2000420208695695 0.0 9 0.0 0.0 0.0 1.309511161196592 0.0 10 0.0 0.0 0.0 1.5803786414605117 0.0 11 0.0 0.0 0.0 1.8055245505736683 0.0 12 0.0 0.0 0.0 2.0237465664055088 0.0 13 0.0 0.0 0.0 2.113100602975603 0.0 14 0.0 0.0 0.0 2.145153453769284 0.0 15 0.0 0.0 0.0 2.2091994666214623 0.0 16 0.0 0.0 0.0 2.3362170950925116 0.0 17 0.0 0.0 0.0 2.501316136610802 0.0 18 0.0 0.0 0.0 2.742578004223575 0.0 19 0.0 0.0 0.0 2.842138814510093 0.0 20 0.0 0.0 0.0 2.947489432109436 0.0 21 0.0 2.3875494073505484E-4 0.0 3.0823859736247416 0.0 22 5.968873518376371E-5 2.3875494073505484E-4 0.0 3.217461581345599 0.0 23 1.1937747036752742E-4 2.3875494073505484E-4 0.0 3.3772483254325345 0.0 24 1.1937747036752742E-4 2.3875494073505484E-4 0.0 3.4934026041001385 0.0 25 1.1937747036752742E-4 2.3875494073505484E-4 0.0 3.584189170314643 0.0 26 1.1937747036752742E-4 2.3875494073505484E-4 0.0 3.67945239166793 0.0 27 1.1937747036752742E-4 2.3875494073505484E-4 0.0 3.772626507289785 0.0 28 1.1937747036752742E-4 2.3875494073505484E-4 0.0 3.8712919865485467 0.0 29 1.1937747036752742E-4 2.3875494073505484E-4 0.0 3.9807014381403856 0.0 30 1.1937747036752742E-4 2.3875494073505484E-4 0.0 4.129386077483141 0.0 31 1.1937747036752742E-4 2.3875494073505484E-4 0.0 4.261596625915177 0.0 32 1.1937747036752742E-4 2.3875494073505484E-4 0.0 4.377333083436495 0.0 33 1.1937747036752742E-4 2.3875494073505484E-4 0.0 4.48763786605609 0.0 34 1.1937747036752742E-4 2.3875494073505484E-4 0.0 4.61053697179946 0.0 35 1.1937747036752742E-4 2.3875494073505484E-4 0.0 4.766443948099451 0.0 36 1.1937747036752742E-4 2.3875494073505484E-4 0.0 4.898594807796304 0.0 37 1.1937747036752742E-4 2.3875494073505484E-4 0.0 5.035043256426388 0.0 38 1.1937747036752742E-4 2.3875494073505484E-4 0.0 5.163015904660377 0.0 >>END_MODULE >>Kmer Content warn #Sequence Count PValue Obs/Exp Max Max Obs/Exp Position TGATCGC 25 4.4437154E-5 44.0 11 AATCCGC 30 2.5284135E-6 44.0 23 CTCCGTC 20 7.857515E-4 44.0 15 GTCGACA 30 2.5284135E-6 44.0 13 CGACGTA 20 7.857515E-4 44.0 39 CGCATCA 25 4.4437154E-5 44.0 19 TCTTACG 45 4.802132E-10 44.0 1 TTACTCG 30 2.5284135E-6 44.0 28 CGTCTAC 25 4.4437154E-5 44.0 35 GCGCATC 20 7.857515E-4 44.0 18 TCTAGCG 60 0.0 44.0 1 GCGCACC 20 7.857515E-4 44.0 21 ATCCGCG 20 7.857515E-4 44.0 10 GTATGCG 45 4.802132E-10 44.0 1 TCTCGCA 20 7.857515E-4 44.0 38 AGCGCAT 25 4.4437154E-5 44.0 34 GCGATCG 20 7.857515E-4 44.0 9 CCGACGG 30 2.5284135E-6 44.0 2 CGTAACG 20 7.857515E-4 44.0 11 TTCGGAC 25 4.4437154E-5 44.0 33 >>END_MODULE