##FastQC 0.11.5 >>Basic Statistics pass #Measure Value Filename SRR1545923_1.fastq.gz File type Conventional base calls Encoding Illumina 1.5 Total Sequences 1383641 Sequences flagged as poor quality 0 Sequence length 50 %GC 47 >>END_MODULE >>Per base sequence quality pass #Base Mean Median Lower Quartile Upper Quartile 10th Percentile 90th Percentile 1 31.460972174140547 31.0 31.0 33.0 30.0 34.0 2 31.853156996648696 31.0 31.0 34.0 30.0 34.0 3 31.928724286140696 31.0 31.0 34.0 30.0 34.0 4 35.687426145943924 37.0 35.0 37.0 33.0 37.0 5 35.60709461486036 37.0 35.0 37.0 33.0 37.0 6 35.65537592482443 37.0 35.0 37.0 33.0 37.0 7 35.94204638341882 37.0 35.0 37.0 35.0 37.0 8 35.93635921456505 37.0 35.0 37.0 35.0 37.0 9 37.75312237784223 39.0 38.0 39.0 35.0 39.0 10 37.23985412401049 39.0 37.0 39.0 34.0 39.0 11 36.85631894400354 39.0 35.0 39.0 33.0 39.0 12 35.77735192871561 37.0 35.0 39.0 32.0 39.0 13 35.304959884825614 37.0 35.0 39.0 30.0 39.0 14 36.11895932543196 38.0 35.0 41.0 30.0 41.0 15 36.45799380041499 38.0 35.0 41.0 31.0 41.0 16 36.71916125642417 38.0 35.0 41.0 32.0 41.0 17 36.64991280252609 38.0 35.0 41.0 32.0 41.0 18 36.58594462002788 38.0 35.0 40.0 32.0 41.0 19 36.43204415018057 37.0 35.0 40.0 31.0 41.0 20 36.19302983938753 36.0 35.0 40.0 31.0 41.0 21 36.01249095683057 36.0 35.0 40.0 31.0 41.0 22 35.917080369835816 35.0 35.0 40.0 31.0 41.0 23 35.890396425084255 35.0 35.0 40.0 31.0 41.0 24 35.91466861707625 35.0 35.0 40.0 31.0 41.0 25 35.870516991040304 35.0 35.0 40.0 31.0 41.0 26 35.622512631527975 35.0 35.0 40.0 30.0 41.0 27 35.573398012923874 35.0 34.0 40.0 30.0 41.0 28 35.569576935057576 36.0 35.0 40.0 30.0 41.0 29 35.5251167029598 36.0 35.0 40.0 30.0 41.0 30 35.42320153854938 36.0 34.0 40.0 30.0 41.0 31 35.14310865318388 35.0 34.0 40.0 29.0 41.0 32 34.92895266908107 35.0 34.0 40.0 29.0 41.0 33 34.68906024033691 35.0 34.0 40.0 27.0 41.0 34 34.456463056529834 35.0 34.0 40.0 25.0 41.0 35 34.22464859020512 35.0 33.0 40.0 23.0 41.0 36 33.974843908210296 35.0 33.0 40.0 23.0 41.0 37 33.8507987259701 35.0 33.0 40.0 23.0 41.0 38 33.744031146807586 35.0 33.0 40.0 23.0 41.0 39 33.68629290401195 35.0 33.0 40.0 23.0 41.0 40 33.47025420611271 35.0 33.0 40.0 21.0 41.0 41 33.43607698817829 35.0 33.0 40.0 21.0 41.0 42 33.41613467655266 35.0 33.0 40.0 21.0 41.0 43 33.29413843619841 35.0 33.0 39.0 21.0 41.0 44 33.135483842991064 35.0 33.0 39.0 21.0 41.0 45 33.022461751277966 35.0 33.0 39.0 20.0 41.0 46 33.03624928720672 35.0 33.0 39.0 20.0 41.0 47 32.967628886394664 35.0 32.0 39.0 20.0 41.0 48 32.870859565450864 35.0 32.0 38.0 20.0 41.0 49 32.831655754635776 35.0 32.0 38.0 20.0 41.0 50 32.62597017578982 35.0 32.0 38.0 20.0 40.0 >>END_MODULE >>Per sequence quality scores pass #Quality Count 9 1.0 10 5.0 11 0.0 12 2.0 13 6.0 14 15.0 15 46.0 16 142.0 17 397.0 18 883.0 19 1733.0 20 2980.0 21 4535.0 22 6934.0 23 9787.0 24 13872.0 25 20138.0 26 28272.0 27 34146.0 28 36124.0 29 36697.0 30 40319.0 31 46282.0 32 57593.0 33 75375.0 34 142980.0 35 243415.0 36 85051.0 37 106614.0 38 154788.0 39 234509.0 >>END_MODULE >>Per base sequence content fail #Base G A T C 1 33.50919783383117 22.713333877790554 27.654066336571407 16.123401951806862 2 33.641818940028514 24.493781262625202 29.26091377748997 12.603486019856305 3 28.0169494832836 24.27081880343239 33.87757373480549 13.834657978478521 4 25.051874004889996 27.06258343023949 33.159034749620744 14.726507815249764 5 22.534602545024324 31.65886237831923 32.07754034464142 13.728994732015023 6 19.561287935237537 40.28017383121778 29.31829860491269 10.840239628631993 7 86.20892269020649 3.6394556102341573 8.812040117342576 1.3395815822167745 8 88.15090041419703 2.018225825918717 8.382015277084157 1.4488584828000906 9 85.7344499042743 2.9942738036817356 9.429685879501982 1.8415904125419817 10 56.93919159666416 18.533709249725906 14.239531786063003 10.287567367546929 11 50.83406750739534 18.58704678453443 18.494754058314257 12.084131649755971 12 43.260571203079415 19.831155624905595 23.71691789994659 13.191355272068407 13 21.797633923828506 39.4109454692366 24.905231920707756 13.886188686227136 14 15.241453527323923 40.95231349750405 29.95451854924796 13.851714425924067 15 14.666665703025568 19.712627769775544 51.39924301173499 14.221463515463912 16 17.963546902700916 14.620049564879908 47.76260605171428 19.653797480704892 17 17.659783137388963 15.644737327095685 29.426997320836833 37.268482214678514 18 24.321699053439442 20.318565292586733 34.73834614614629 20.621389507827537 19 30.599338990388404 22.11643049027891 26.508971619083272 20.775258900249412 20 32.08368355664511 22.0070090435308 24.98169684188312 20.927610557940966 21 23.37737895884843 25.374862410119388 30.57693433484553 20.670824296186655 22 23.68779184774085 20.963313460644777 27.798684774446553 27.550209917167823 23 20.06965679681362 27.759729583034904 26.505863876540232 25.664749743611242 24 20.974154423004233 22.89257112213356 38.88747153343967 17.245802921422538 25 19.008760220317264 21.611530736657848 37.19042728569043 22.189281757334452 26 17.0273213933383 31.206071517105954 28.590075026686833 23.176532062868908 27 18.98194690674821 29.8082378304777 31.62980859919589 19.580006663578196 28 16.065944851301747 25.090323284724867 40.23269041608336 18.611041447890024 29 16.471685935874987 23.337195125036043 38.561086293337645 21.630032645751317 30 20.897544955664078 26.402730187960604 34.28360391170831 18.416120944667007 31 31.264468167682224 23.091322098723584 26.256666288437536 19.387543445156656 32 31.25608449012425 24.272119718915526 27.017557299906553 17.454238491053676 33 29.249855995883323 24.61801869126457 25.781832137093364 20.35029317575874 34 19.843875687407355 26.940080555577637 29.77318538551546 23.442858371499543 35 20.40550981070957 24.77940448425567 31.984958526091667 22.830127178943094 36 32.514214308480305 22.647637645892253 26.55385320325142 18.28429484237602 37 21.436846696505814 29.712042357808134 28.783911433673907 20.06719951201215 38 22.835186294710837 30.537328685692316 22.979877005668378 23.64760801392847 39 22.006575405036422 28.039715504238455 26.906473572263323 23.047235518461797 40 25.507628062481523 23.501255022075814 25.128411199147756 25.862705716294904 41 18.882065506876422 22.06952525980366 27.74411859723729 31.304290636082627 42 25.070448187065864 23.6848286513626 24.17144331513738 27.073279846434158 43 24.192836147526705 24.274432457552212 25.213115251716307 26.319616143204776 44 21.267294045203922 28.677164090974465 28.012902190669404 22.042639673152213 45 18.929838014340426 34.29885353209395 23.254731538021783 23.516576915543844 46 24.07987331974118 28.969219616938208 26.307907903856563 20.64299915946405 47 23.071157908734996 26.120937439697144 27.06424571113461 23.74365894043325 48 25.310756186033807 22.96231464664606 29.930307066645177 21.79662210067496 49 23.189902583112236 21.641234973522756 31.43524946138485 23.73361298198015 50 21.224869745837253 30.365896934248116 26.86657883078053 21.5426544891341 >>END_MODULE >>Per sequence GC content fail #GC Content Count 0 488.0 1 1285.5 2 2083.0 3 11814.5 4 21546.0 5 15306.5 6 9067.0 7 9271.5 8 9476.0 9 9862.5 10 10249.0 11 10026.5 12 9804.0 13 9126.5 14 8449.0 15 7746.5 16 7044.0 17 6366.0 18 5688.0 19 5220.5 20 4753.0 21 4640.0 22 4527.0 23 4578.0 24 4629.0 25 5026.5 26 5424.0 27 5367.0 28 5310.0 29 6830.0 30 8350.0 31 11158.5 32 13967.0 33 14966.0 34 15965.0 35 17814.0 36 19663.0 37 24064.5 38 28466.0 39 38274.5 40 48083.0 41 71244.0 42 94405.0 43 111352.0 44 128299.0 45 133383.0 46 138467.0 47 129390.5 48 120314.0 49 117120.0 50 113926.0 51 107506.0 52 101086.0 53 90943.5 54 80801.0 55 77220.0 56 73639.0 57 67761.0 58 61883.0 59 59472.5 60 57062.0 61 51989.5 62 46917.0 63 41317.5 64 35718.0 65 31592.0 66 27466.0 67 24040.5 68 20615.0 69 17326.0 70 14037.0 71 12225.5 72 10414.0 73 8601.5 74 6789.0 75 5239.0 76 3689.0 77 3124.0 78 2559.0 79 2001.0 80 1443.0 81 1042.5 82 642.0 83 408.0 84 174.0 85 140.5 86 107.0 87 111.5 88 116.0 89 71.5 90 27.0 91 18.5 92 10.0 93 7.0 94 4.0 95 2.0 96 0.0 97 0.5 98 1.0 99 0.5 100 0.0 >>END_MODULE >>Per base N content pass #Base N-Count 1 0.0 2 0.0 3 0.0 4 0.0 5 0.0 6 0.0 7 0.0 8 0.0 9 0.0 10 0.0 11 0.0 12 0.0 13 0.0 14 0.0 15 0.0 16 0.0 17 0.0 18 0.0 19 0.0 20 0.0 21 0.0 22 0.0 23 0.0 24 0.0 25 0.0 26 0.0 27 0.0 28 0.0 29 0.0 30 0.0 31 0.0 32 0.0 33 0.0 34 0.0 35 0.0 36 0.0 37 0.0 38 0.0 39 0.0 40 0.0 41 0.0 42 0.0 43 0.0 44 0.0 45 0.0 46 0.0 47 0.0 48 0.0 49 0.0 50 0.0 >>END_MODULE >>Sequence Length Distribution pass #Length Count 50 1383641.0 >>END_MODULE >>Sequence Duplication Levels fail #Total Deduplicated Percentage 19.360410274366238 #Duplication Level Percentage of deduplicated Percentage of total 1 79.97321877804055 15.483143265045152 2 6.82192576033401 2.6415056316266856 3 2.3070277964714925 1.3399501396216558 4 1.2758564406175323 0.9880441656619205 5 0.8567796996483206 0.8293803249969884 6 0.6138700213789914 0.7130865281418748 7 0.45720552724084207 0.6196180610963441 8 0.380548618872146 0.5894061912566542 9 0.2908923987229578 0.5068616566473894 >10 4.086613235844084 19.779913947966264 >50 1.8667879593853767 26.223390178309025 >100 1.0654940753438236 28.680870204096976 >500 0.0030237504798689557 0.4329110636967655 >1k 3.7796880998361947E-4 0.22223646052181825 >5k 0.0 0.0 >10k+ 3.7796880998361947E-4 0.949682181314507 >>END_MODULE >>Overrepresented sequences warn #Sequence Count Percentage Possible Source CGTTTTTTTTTTTTTTTTTTTTTTTTTTTTTTTTTTTTTTTTTTTTTTTT 12978 0.9379600633401294 No Hit GACCAGAAAAATGGTCCTGCCAAGCGGCTACAGTGTTCTTCTTTCAGATA 3037 0.21949335123778493 No Hit >>END_MODULE >>Adapter Content pass #Position Illumina Universal Adapter Illumina Small RNA 3' Adapter Illumina Small RNA 5' Adapter Nextera Transposase Sequence SOLID Small RNA Adapter 1 0.0 0.0 0.0 0.028331048299378235 0.0 2 0.0 0.0 0.0 0.11874467437724091 0.0 3 0.0 0.0 0.0 0.17005856287866578 0.0 4 0.0 0.0 0.0 0.25295578838730565 0.0 5 0.0 0.0 0.0 0.43616805226211136 0.0 6 0.0 0.0 0.0 0.629064909178031 0.0 7 0.0 0.0 0.0 0.7446295679298315 0.0 8 0.0 0.0 0.0 1.0510674372904532 0.0 9 0.0 0.0 0.0 1.1777621507312952 0.0 10 0.0 0.0 0.0 1.3960268595683418 0.0 11 0.0 0.0 0.0 1.5860327931884066 0.0 12 0.0 0.0 0.0 1.749225413239417 0.0 13 0.0 0.0 0.0 1.8305326309353365 0.0 14 0.0 0.0 0.0 1.8631277910961008 0.0 15 0.0 0.0 0.0 1.9038898095676553 0.0 16 0.0 0.0 0.0 1.9917738777616447 0.0 17 0.0 0.0 0.0 2.092811646951774 0.0 18 0.0 0.0 0.0 2.255064716931632 0.0 19 0.0 0.0 0.0 2.318014571698873 0.0 20 0.0 0.0 0.0 2.3892035578593003 0.0 21 0.0 0.0 0.0 2.487784042247953 0.0 22 0.0 0.0 0.0 2.580582680044896 0.0 23 0.0 0.0 0.0 2.6907268576169687 0.0 24 0.0 0.0 0.0 2.7753586371031216 0.0 25 0.0 0.0 0.0 2.8437289730500903 0.0 26 0.0 0.0 0.0 2.916580240105634 0.0 27 0.0 0.0 0.0 2.996947907730401 0.0 28 0.0 0.0 0.0 3.077315575355168 0.0 29 0.0 0.0 0.0 3.180376990852396 0.0 30 0.0 0.0 0.0 3.288063883622992 0.0 31 0.0 0.0 0.0 3.3937271300864893 0.0 32 0.0 0.0 0.0 3.481828017527668 0.0 33 0.0 0.0 0.0 3.5810589596578883 0.0 34 0.0 0.0 0.0 3.6872281176981603 0.0 35 0.0 0.0 0.0 3.816813754434857 0.0 36 0.0 0.0 0.0 3.9162615158122662 0.0 37 0.0 0.0 0.0 4.028501612773834 0.0 38 0.0 0.0 0.0 4.164808646173393 0.0 >>END_MODULE >>Kmer Content fail #Sequence Count PValue Obs/Exp Max Max Obs/Exp Position TACGATC 30 2.5280915E-6 44.000004 26 CGGAATA 20 7.857038E-4 44.0 38 AACGTCC 20 7.857038E-4 44.0 33 GGTACGC 20 7.857038E-4 44.0 8 TTAATCG 45 4.802132E-10 44.0 20 GACGTGA 20 7.857038E-4 44.0 37 CTATACG 35 1.4463694E-7 44.0 1 CCTAAGT 45 4.802132E-10 44.0 20 TGCGATT 25 4.4433124E-5 44.0 1 GAACGTA 25 4.4433124E-5 44.0 11 CGTCGAA 20 7.857038E-4 44.0 21 CGGTCTA 255 0.0 44.0 31 ACGTAAT 20 7.857038E-4 44.0 10 TATCGTG 40 8.314601E-9 44.0 1 TAATGCG 65 0.0 43.999996 1 CGTTTTT 8635 0.0 42.904457 1 CACGACG 280 0.0 40.857143 26 GCGATAA 70 0.0 40.857143 9 CACGACC 190 0.0 40.526318 27 AGTACGG 185 0.0 40.432434 2 >>END_MODULE