##FastQC 0.11.5 >>Basic Statistics pass #Measure Value Filename SRR1545922_1.fastq.gz File type Conventional base calls Encoding Illumina 1.5 Total Sequences 1238197 Sequences flagged as poor quality 0 Sequence length 50 %GC 48 >>END_MODULE >>Per base sequence quality pass #Base Mean Median Lower Quartile Upper Quartile 10th Percentile 90th Percentile 1 31.499364802208373 31.0 31.0 33.0 30.0 34.0 2 31.89833685592842 31.0 31.0 34.0 30.0 34.0 3 32.005702646670926 33.0 31.0 34.0 30.0 34.0 4 35.76701122680801 37.0 35.0 37.0 35.0 37.0 5 35.70081739820077 37.0 35.0 37.0 33.0 37.0 6 35.75619550039291 37.0 35.0 37.0 33.0 37.0 7 35.981624894907675 37.0 35.0 37.0 35.0 37.0 8 35.96505321851046 37.0 35.0 37.0 35.0 37.0 9 37.776290848709856 39.0 38.0 39.0 35.0 39.0 10 37.26816007468925 39.0 37.0 39.0 34.0 39.0 11 36.94312778984281 39.0 37.0 39.0 33.0 39.0 12 36.234382735542084 38.0 35.0 39.0 32.0 39.0 13 35.96479316296195 38.0 35.0 39.0 32.0 39.0 14 36.90826015569412 39.0 35.0 41.0 31.0 41.0 15 37.08272350845625 39.0 35.0 41.0 32.0 41.0 16 37.23468640289065 39.0 35.0 41.0 32.0 41.0 17 37.15575954391748 39.0 35.0 41.0 32.0 41.0 18 37.07590472275413 38.0 35.0 41.0 32.0 41.0 19 36.97255444812094 38.0 35.0 41.0 32.0 41.0 20 36.79214939141348 38.0 35.0 41.0 32.0 41.0 21 36.652701468344695 38.0 35.0 40.0 32.0 41.0 22 36.55807839947924 38.0 35.0 40.0 31.0 41.0 23 36.490789430114916 38.0 35.0 40.0 31.0 41.0 24 36.55915011908444 38.0 35.0 40.0 31.0 41.0 25 36.51614403846884 38.0 35.0 40.0 31.0 41.0 26 36.277879852721334 38.0 35.0 40.0 31.0 41.0 27 36.26042544118585 38.0 35.0 40.0 31.0 41.0 28 36.221597209490895 38.0 35.0 40.0 31.0 41.0 29 36.15596791140667 38.0 35.0 40.0 31.0 41.0 30 36.0409014074497 37.0 35.0 40.0 30.0 41.0 31 35.83773906736973 37.0 35.0 40.0 30.0 41.0 32 35.664800512357886 37.0 35.0 40.0 30.0 41.0 33 35.45510932428362 37.0 34.0 40.0 29.0 41.0 34 35.211112609705886 37.0 34.0 40.0 27.0 41.0 35 35.00435875712831 37.0 34.0 40.0 26.0 41.0 36 34.79637327501197 37.0 34.0 40.0 25.0 41.0 37 34.70487248798051 37.0 34.0 40.0 24.0 41.0 38 34.58509510199104 36.0 34.0 40.0 24.0 41.0 39 34.46184492451524 36.0 34.0 40.0 23.0 41.0 40 34.278751281096625 36.0 33.0 40.0 23.0 41.0 41 34.21275693609337 36.0 33.0 40.0 23.0 41.0 42 34.191282162693014 36.0 33.0 40.0 23.0 41.0 43 34.09816693143337 35.0 33.0 40.0 23.0 41.0 44 33.97057899510337 35.0 33.0 40.0 23.0 41.0 45 33.85989224654881 35.0 33.0 40.0 23.0 41.0 46 33.807665500724035 35.0 33.0 40.0 23.0 41.0 47 33.728510083613514 35.0 33.0 40.0 23.0 41.0 48 33.58456287650511 35.0 33.0 39.0 23.0 41.0 49 33.5261884821236 35.0 33.0 39.0 23.0 41.0 50 33.374152901355764 35.0 33.0 39.0 22.0 41.0 >>END_MODULE >>Per sequence quality scores pass #Quality Count 10 1.0 11 6.0 12 5.0 13 9.0 14 9.0 15 36.0 16 99.0 17 231.0 18 526.0 19 1076.0 20 1871.0 21 3055.0 22 4731.0 23 6783.0 24 10002.0 25 14722.0 26 20853.0 27 25431.0 28 27312.0 29 28905.0 30 32622.0 31 38168.0 32 46908.0 33 62035.0 34 112640.0 35 172348.0 36 87361.0 37 114829.0 38 170350.0 39 255273.0 >>END_MODULE >>Per base sequence content fail #Base G A T C 1 35.036912542995985 21.68192945064477 28.536896794290406 14.744261212068837 2 33.931757224415826 23.78466431432155 29.364955657298474 12.91862280396415 3 29.485534208207582 24.36494354290957 33.2128086241527 12.936713624730151 4 25.992552073700715 27.41776954717222 32.054996095128644 14.534682283998427 5 22.596162000069455 31.45105342687795 31.284924773683027 14.667859799369568 6 20.373090873261688 41.34043290364942 28.125734434827415 10.16074178826148 7 87.6968689150434 3.140130366977145 7.8493163850340455 1.3136843329454038 8 89.22207047828415 1.9352332464058628 7.577711785765915 1.264984489544071 9 86.15236509214608 3.1945643544605584 8.647735376519245 2.0053351768741163 10 51.33876111798041 23.148416608988715 14.286579599207558 11.22624267382331 11 42.44938406408673 21.053354191618944 21.147523374713394 15.349738369580932 12 37.60936264584715 20.131287670701838 26.82594126782733 15.433408415623685 13 23.72619219720287 31.193420756147848 27.870605404471178 17.2097816421781 14 18.796362775874922 33.16556250742006 31.006859166998467 17.03121554970655 15 18.39190371160647 21.591233059036647 42.43242391961861 17.584439309738272 16 21.44997928439497 17.499961637768465 40.43209602349223 20.61796305434434 17 21.694205364735982 18.679095491266736 28.9676037011881 30.659095442809182 18 25.079046387610372 21.941742711377916 32.33839203293176 20.640818868079958 19 28.66014051075879 24.050454006914894 26.396526562412927 20.89287891991339 20 30.56209956897004 23.17482597680337 25.642930809879203 20.620143644347387 21 25.6820199047486 25.26956534380232 29.13421692993926 19.914197821509823 22 25.056029048689343 21.259621853388435 28.028900086173685 25.655449011748534 23 22.699457356139614 25.665867386207523 27.20827138169451 24.42640387595835 24 22.904190528647703 22.86978566415522 34.3245864753347 19.901437331862375 25 22.13508835831455 22.31139309819035 33.0380383735383 22.5154801699568 26 20.682492365915923 27.18129667573092 28.058459195103847 24.077751763249307 27 20.691376251113514 26.875367974563012 30.26675076744654 22.166505006876935 28 19.17344332121625 24.74218561343631 35.56752277707021 20.516848288277227 29 20.441173738912305 23.789752357661985 33.982556895227496 21.78651700819821 30 23.23176360466065 24.94118464186232 31.775880574738913 20.051171178738116 31 30.026562816740793 23.150354911213643 26.343304013820095 20.479778258225465 32 30.21433584478076 23.381255163758272 27.044404081095337 19.360004910365635 33 28.25463153278517 24.084858871407377 26.605136339370876 21.055373256436578 34 22.371399704570436 25.126938605084653 29.150773261443856 23.350888428901058 35 22.88399988047136 25.05942107758297 29.62808018433254 22.42849885761313 36 30.723463229195353 23.95507338492986 25.64559597543848 19.675867410436304 37 23.67862303009941 28.702137058965576 26.618462167167262 21.000777743767753 38 23.54907983140001 29.770060822308565 24.673375884451342 22.00748346184008 39 23.549160593992717 27.070894211502694 26.123791286846927 23.256153907657666 40 25.831672989031635 24.00441932907284 26.066853658989643 24.097054022905887 41 21.650997377638614 23.10650082337463 27.380941804898573 27.861559994088182 42 23.32068321922925 24.371808363289524 25.538747065289286 26.768761352191937 43 22.97873440171475 24.009345847227863 26.894831759405008 26.117087991652376 44 22.19719479210497 26.016780851512323 28.721197030844042 23.064827325538666 45 21.761399841866844 29.984243218163183 25.19986722629759 23.05448971367238 46 24.156818341507854 27.396852035661528 27.108448817110688 21.33788080571993 47 23.171999286058682 25.71594019368485 28.58220460879812 22.529855911458355 48 23.315191362925287 24.756319067159748 29.912768323618938 22.015721246296025 49 23.212703632782183 23.24549324542056 30.684777947289486 22.857025174507772 50 22.310181659299772 27.575418128133084 28.170961486742417 21.943438725824727 >>END_MODULE >>Per sequence GC content fail #GC Content Count 0 345.0 1 1179.0 2 2013.0 3 10229.5 4 18446.0 5 12897.0 6 7348.0 7 7197.0 8 7046.0 9 7263.5 10 7481.0 11 7246.5 12 7012.0 13 6520.5 14 6029.0 15 5679.5 16 5330.0 17 4829.5 18 4329.0 19 4161.5 20 3994.0 21 3874.5 22 3755.0 23 3858.0 24 3961.0 25 4220.5 26 4480.0 27 5816.0 28 7152.0 29 8978.0 30 10804.0 31 13259.0 32 15714.0 33 17898.5 34 20083.0 35 22420.5 36 24758.0 37 26664.0 38 28570.0 39 34548.0 40 40526.0 41 57241.0 42 73956.0 43 82009.0 44 90062.0 45 93718.5 46 97375.0 47 95662.0 48 93949.0 49 95486.5 50 97024.0 51 91385.0 52 85746.0 53 80848.5 54 75951.0 55 73636.5 56 71322.0 57 70409.0 58 69496.0 59 65894.5 60 62293.0 61 58634.0 62 54975.0 63 49464.0 64 43953.0 65 37753.0 66 31553.0 67 27222.0 68 22891.0 69 19066.5 70 15242.0 71 12553.0 72 9864.0 73 7840.0 74 5816.0 75 4750.0 76 3684.0 77 2815.5 78 1947.0 79 1373.5 80 800.0 81 716.5 82 633.0 83 428.5 84 224.0 85 171.0 86 118.0 87 95.5 88 73.0 89 57.5 90 42.0 91 33.0 92 24.0 93 14.5 94 5.0 95 4.0 96 3.0 97 1.5 98 0.0 99 0.0 100 0.0 >>END_MODULE >>Per base N content pass #Base N-Count 1 0.0 2 0.0 3 0.0 4 0.0 5 0.0 6 0.0 7 0.0 8 0.0 9 0.0 10 0.0 11 0.0 12 0.0 13 0.0 14 0.0 15 0.0 16 0.0 17 0.0 18 0.0 19 0.0 20 0.0 21 0.0 22 0.0 23 0.0 24 0.0 25 0.0 26 0.0 27 0.0 28 0.0 29 0.0 30 0.0 31 0.0 32 0.0 33 0.0 34 0.0 35 0.0 36 0.0 37 0.0 38 0.0 39 0.0 40 0.0 41 0.0 42 0.0 43 0.0 44 0.0 45 0.0 46 0.0 47 0.0 48 0.0 49 0.0 50 0.0 >>END_MODULE >>Sequence Length Distribution pass #Length Count 50 1238197.0 >>END_MODULE >>Sequence Duplication Levels fail #Total Deduplicated Percentage 21.791197624320493 #Duplication Level Percentage of deduplicated Percentage of total 1 76.0029396467424 16.561950778714667 2 6.3543536264465015 2.7693795129742664 3 2.5883041404601066 1.692067411098395 4 1.5060712036378934 1.3127638093908627 5 1.0368955382169984 1.1297597794531387 6 0.7979072412005647 1.0432412627326721 7 0.6692993300184673 1.0209383779180405 8 0.5727301980355277 0.9984381544646717 9 0.49776478600130536 0.976220173996384 >10 8.263054858088243 44.57559353644341 >50 1.5887560139476127 22.634217955494158 >100 0.11779677846814673 3.8117318265653957 >500 0.0033763407841187905 0.5437973729880256 >1k 3.75148976013199E-4 0.10733703408497858 >5k 0.0 0.0 >10k+ 3.75148976013199E-4 0.8225630136809251 >>END_MODULE >>Overrepresented sequences warn #Sequence Count Percentage Possible Source CGTTTTTTTTTTTTTTTTTTTTTTTTTTTTTTTTTTTTTTTTTTTTTTTT 10062 0.8126332078013434 No Hit GACCAGAAAAATGGTCCTGCCAAGCGGCTACAGTGTTCTTCTTTCAGATA 1313 0.10604128422213913 No Hit >>END_MODULE >>Adapter Content pass #Position Illumina Universal Adapter Illumina Small RNA 3' Adapter Illumina Small RNA 5' Adapter Nextera Transposase Sequence SOLID Small RNA Adapter 1 0.0 0.0 0.0 0.032870375231081966 0.0 2 0.0 0.0 0.0 0.1116946657115144 0.0 3 0.0 0.0 0.0 0.1563563794775791 0.0 4 0.0 0.0 0.0 0.2103057914047603 0.0 5 0.0 0.0 0.0 0.3496212638215082 0.0 6 0.0 0.0 0.0 0.5024240892200514 0.0 7 0.0 0.0 0.0 0.6024081789892884 0.0 8 0.0 0.0 0.0 0.856164245269533 0.0 9 0.0 0.0 0.0 0.984092192114825 0.0 10 0.0 0.0 0.0 1.1901983286989066 0.0 11 0.0 0.0 0.0 1.3702181478391564 0.0 12 0.0 0.0 0.0 1.5197904695294853 0.0 13 0.0 0.0 0.0 1.579231737760631 0.0 14 0.0 0.0 0.0 1.6057218681679895 0.0 15 0.0 0.0 0.0 1.6419842722926965 0.0 16 0.0 0.0 0.0 1.7216161887001826 0.0 17 0.0 0.0 0.0 1.807789875116803 0.0 18 0.0 0.0 0.0 1.939513663819247 0.0 19 0.0 0.0 0.0 1.9993587450139194 0.0 20 0.0 0.0 0.0 2.067926186220771 0.0 21 0.0 0.0 0.0 2.1617723189444007 0.0 22 0.0 0.0 0.0 2.2587681927835392 0.0 23 0.0 0.0 0.0 2.3674746425649555 0.0 24 0.0 0.0 0.0 2.4541329045378077 0.0 25 0.0 0.0 0.0 2.5248809357477042 0.0 26 0.0 0.0 0.0 2.596194305106538 0.0 27 0.0 0.0 0.0 2.6826910418939796 0.0 28 0.0 0.0 0.0 2.763049821635814 0.0 29 0.0 0.0 0.0 2.8540692636147558 0.0 30 0.0 0.0 0.0 2.9749708648946815 0.0 31 0.0 0.0 0.0 3.0756010554055613 0.0 32 0.0 0.0 0.0 3.165651346272039 0.0 33 0.0 0.0 0.0 3.260385867515428 0.0 34 0.0 0.0 0.0 3.3612583458044236 0.0 35 0.0 0.0 0.0 3.485228925607153 0.0 36 0.0 0.0 0.0 3.5897357205678904 0.0 37 0.0 0.0 0.0 3.6928695514526364 0.0 38 0.0 0.0 0.0 3.833719513130786 0.0 >>END_MODULE >>Kmer Content warn #Sequence Count PValue Obs/Exp Max Max Obs/Exp Position CTAGACG 20 7.8567176E-4 44.0 26 GTACACG 25 4.44304E-5 44.0 27 GTTTACG 40 8.312782E-9 44.0 1 CTACGAT 25 4.44304E-5 44.0 35 GCGTAAG 50 2.7284841E-11 44.0 1 CGTTTTT 6105 0.0 42.666664 1 GCGATAT 85 0.0 41.411766 9 TAGACGG 80 0.0 41.25 2 CGTAAGG 140 0.0 40.857143 2 CGGTCTA 235 0.0 40.25532 31 TCGTTAG 55 7.8216544E-11 40.0 1 TACGGGA 260 0.0 39.76923 4 CGTTAGG 170 0.0 38.823532 2 GCAATCC 170 0.0 38.823532 35 TCACGAC 250 0.0 38.72 25 AACGTAG 40 4.124886E-7 38.5 1 TCTAACG 40 4.124886E-7 38.5 1 TAATGCG 40 4.124886E-7 38.5 1 ATTGGGA 650 0.0 38.246155 4 TATGGGC 410 0.0 38.09756 4 >>END_MODULE