##FastQC 0.11.5 >>Basic Statistics pass #Measure Value Filename SRR1545921_1.fastq.gz File type Conventional base calls Encoding Illumina 1.5 Total Sequences 1666395 Sequences flagged as poor quality 0 Sequence length 50 %GC 46 >>END_MODULE >>Per base sequence quality pass #Base Mean Median Lower Quartile Upper Quartile 10th Percentile 90th Percentile 1 31.539116475985587 31.0 31.0 33.0 30.0 34.0 2 31.94150366509741 31.0 31.0 34.0 30.0 34.0 3 31.991489412774282 33.0 31.0 34.0 30.0 34.0 4 35.73733718596131 37.0 35.0 37.0 35.0 37.0 5 35.66984658499335 37.0 35.0 37.0 33.0 37.0 6 35.72213610818564 37.0 35.0 37.0 33.0 37.0 7 36.014078894859864 37.0 35.0 37.0 35.0 37.0 8 36.020298308624305 37.0 35.0 37.0 35.0 37.0 9 37.837244470848745 39.0 38.0 39.0 35.0 39.0 10 37.35158050762274 39.0 37.0 39.0 34.0 39.0 11 36.94210316281554 39.0 37.0 39.0 33.0 39.0 12 35.84329825761599 37.0 35.0 39.0 32.0 39.0 13 35.37995733304528 37.0 35.0 39.0 31.0 39.0 14 36.265673504781276 38.0 35.0 41.0 31.0 41.0 15 36.59282403031694 38.0 35.0 41.0 32.0 41.0 16 36.82876448861165 38.0 35.0 41.0 32.0 41.0 17 36.79580231577747 38.0 35.0 41.0 32.0 41.0 18 36.69511010294678 38.0 35.0 40.0 32.0 41.0 19 36.54663930220626 37.0 35.0 40.0 32.0 41.0 20 36.31172681147027 36.0 35.0 40.0 32.0 41.0 21 36.145026839374815 36.0 35.0 40.0 31.0 41.0 22 36.047933413146346 35.0 35.0 40.0 31.0 41.0 23 36.032336270812145 35.0 35.0 40.0 31.0 41.0 24 36.057557781918455 35.0 35.0 40.0 31.0 41.0 25 36.018421202656036 35.0 35.0 40.0 31.0 41.0 26 35.76968605882759 35.0 35.0 40.0 31.0 41.0 27 35.723150873592395 35.0 35.0 40.0 31.0 41.0 28 35.760379141800115 36.0 35.0 40.0 31.0 41.0 29 35.76019191128154 36.0 35.0 40.0 31.0 41.0 30 35.66497379072789 36.0 35.0 40.0 30.0 41.0 31 35.38349731006154 35.0 34.0 40.0 30.0 41.0 32 35.097531497634115 35.0 34.0 40.0 29.0 41.0 33 34.84466828092979 35.0 34.0 40.0 27.0 41.0 34 34.61778509897113 35.0 34.0 40.0 26.0 41.0 35 34.35131226389902 35.0 34.0 40.0 24.0 41.0 36 34.12071807704656 35.0 33.0 40.0 23.0 41.0 37 33.99895522970244 35.0 33.0 40.0 23.0 41.0 38 33.95820198692387 35.0 33.0 40.0 23.0 41.0 39 33.909348623825686 35.0 33.0 40.0 23.0 41.0 40 33.724067222957345 35.0 33.0 40.0 23.0 41.0 41 33.69831702567519 35.0 33.0 40.0 22.0 41.0 42 33.669452920826096 35.0 33.0 40.0 22.0 41.0 43 33.54474419330351 35.0 33.0 40.0 22.0 41.0 44 33.43725707290288 35.0 33.0 40.0 22.0 41.0 45 33.299245977094266 35.0 33.0 39.0 22.0 41.0 46 33.29198059283663 35.0 33.0 39.0 22.0 41.0 47 33.23413416386871 35.0 33.0 39.0 22.0 41.0 48 33.15733784606891 35.0 33.0 39.0 21.0 41.0 49 33.14050030154915 35.0 33.0 39.0 20.0 41.0 50 32.93250279795607 35.0 33.0 39.0 20.0 41.0 >>END_MODULE >>Per sequence quality scores pass #Quality Count 9 1.0 10 2.0 11 2.0 12 3.0 13 2.0 14 19.0 15 44.0 16 115.0 17 305.0 18 707.0 19 1539.0 20 2636.0 21 4503.0 22 6904.0 23 10483.0 24 15484.0 25 23127.0 26 33147.0 27 40318.0 28 40915.0 29 41641.0 30 45468.0 31 53639.0 32 65696.0 33 88120.0 34 172497.0 35 309081.0 36 96187.0 37 121692.0 38 182481.0 39 309637.0 >>END_MODULE >>Per base sequence content fail #Base G A T C 1 31.928924414679592 22.849924537699646 28.800734519726717 16.420416527894048 2 33.92208930055599 24.31140275864966 29.530153415006644 12.236354525787704 3 27.767246061107958 24.199604535539294 35.09522052094491 12.937928882407832 4 24.675122044893318 26.96185478232952 34.111120112578355 14.251903060198812 5 22.03763213403785 31.10973088613444 32.96205281460878 13.89058416521893 6 19.916406374239003 39.74321814455756 29.94290069281293 10.397474788390507 7 86.48327677411419 3.424518196466024 8.90935222441258 1.1828528050072162 8 88.63654775728443 1.796452821809955 8.434074754184932 1.1329246667206754 9 85.72505318366895 3.081142226182868 9.569099763261411 1.6247048268867823 10 56.65049403052698 21.019866238196826 13.677489430777218 8.652150300498981 11 50.56430198122294 17.15997707626343 21.097938964051142 11.17778197846249 12 44.190543058518536 19.289184137014335 24.302581320755284 12.217691483711846 13 20.67895066895904 41.423251990074384 25.24485491135055 12.652942429616026 14 14.101398527960058 43.604487531467626 29.149571380134965 13.14454256043735 15 13.006580072551827 20.824654418670242 52.906243717725985 13.262521791051944 16 15.080818173362259 15.702759549806618 51.18762358264397 18.028798694187152 17 16.300576994050033 16.15643349866028 29.62448879167304 37.918500715616645 18 22.42583541117202 21.29813159545006 36.229045334389504 20.046987658988417 19 29.47044368232022 23.13833154804233 27.257462966463535 20.133761803173915 20 32.02133947833497 21.179492257237932 26.306848016226645 20.492320248200457 21 21.995985345611334 26.39896303097405 30.763954524587504 20.841097098827106 22 22.48134445914684 21.557073803029894 28.70597907458916 27.255602663234107 23 18.241893428628867 29.090881813735635 26.93196991109551 25.735254846539984 24 20.04968809916016 21.90507052649582 40.592176524773535 17.45306484957048 25 16.95492365255537 23.068960240519203 38.38387657188122 21.59223953504421 26 16.393652165302942 32.8128684975651 29.606605876757914 21.18687346037404 27 17.66910006331032 32.012458030659 32.26467914270026 18.053762763330422 28 14.663450142373208 26.38372054644907 42.08972062446178 16.863108686715936 29 15.276630090704785 22.66407424410179 41.30725308225241 20.75204258294102 30 19.110775056334184 27.37310181559594 34.97010012632059 18.546023001749283 31 30.65119614497163 24.268975843062417 25.968212818689445 19.111615193276503 32 30.21654529688339 25.695948439595657 27.626703152613874 16.460803110907076 33 28.31057462366366 26.692710911878635 26.23369609246307 18.763018371994637 34 19.926007939294106 26.90184500073512 29.389790535857347 23.78235652411343 35 19.84925542863487 25.416782935618503 32.35295353142562 22.381008104321005 36 32.76324040818653 21.7981330956946 27.544609771392736 17.894016724726132 37 20.56859268060694 29.87106898424443 30.426459512900607 19.133878822248025 38 20.795909733286525 32.077208584999354 24.104969109964923 23.021912571749194 39 21.02922776412555 30.230167517305322 27.880484518976594 20.860120199592533 40 24.535779332031122 25.25685686766943 25.775341380645045 24.432022419654402 41 18.43398473951254 23.02209260109398 28.490423939102072 30.053498720291405 42 24.139714773508082 24.658859394081233 24.050300198932426 27.15112563347826 43 24.027016403673798 25.659402482604666 25.559366176686797 24.754214937034735 44 20.119779524062423 30.260412447228894 28.229201359821648 21.390606668887028 45 17.799801367622923 37.39893602657233 22.835762229243368 21.96550037656138 46 23.848307274085677 30.66181787631384 26.193009460542065 19.296865389058414 47 22.537213565811225 26.603056298176604 27.41864923982609 23.44108089618608 48 24.33690691582728 22.582760990041375 31.28225900821834 21.798073085913003 49 21.93249499668446 21.846080911188523 32.58615154270146 23.635272549425558 50 20.234098157999757 31.44014474359321 27.55295113103436 20.772805967372683 >>END_MODULE >>Per sequence GC content fail #GC Content Count 0 561.0 1 1392.5 2 2224.0 3 12507.0 4 22790.0 5 17008.5 6 11227.0 7 11766.0 8 12305.0 9 13004.5 10 13704.0 11 13439.5 12 13175.0 13 12322.5 14 11470.0 15 10539.5 16 9609.0 17 8832.0 18 8055.0 19 7324.5 20 6594.0 21 6130.0 22 5666.0 23 5986.5 24 6307.0 25 6777.5 26 7248.0 27 8395.0 28 9542.0 29 10763.5 30 11985.0 31 15313.5 32 18642.0 33 22493.0 34 26344.0 35 29033.0 36 31722.0 37 36987.0 38 42252.0 39 55273.5 40 68295.0 41 101829.0 42 135363.0 43 159919.0 44 184475.0 45 179958.5 46 175442.0 47 160954.5 48 146467.0 49 141432.0 50 136397.0 51 126370.5 52 116344.0 53 105507.0 54 94670.0 55 84345.5 56 74021.0 57 66791.0 58 59561.0 59 55682.0 60 51803.0 61 49234.0 62 46665.0 63 41385.0 64 36105.0 65 30407.0 66 24709.0 67 20720.5 68 16732.0 69 13631.0 70 10530.0 71 8915.5 72 7301.0 73 5804.5 74 4308.0 75 3561.5 76 2815.0 77 2045.5 78 1276.0 79 1067.5 80 859.0 81 637.5 82 416.0 83 327.5 84 239.0 85 174.0 86 109.0 87 78.0 88 47.0 89 28.0 90 9.0 91 8.5 92 8.0 93 6.0 94 4.0 95 3.0 96 2.0 97 1.5 98 1.0 99 0.5 100 0.0 >>END_MODULE >>Per base N content pass #Base N-Count 1 0.0 2 0.0 3 0.0 4 0.0 5 0.0 6 0.0 7 0.0 8 0.0 9 0.0 10 0.0 11 0.0 12 0.0 13 0.0 14 0.0 15 0.0 16 0.0 17 0.0 18 0.0 19 0.0 20 0.0 21 0.0 22 0.0 23 0.0 24 0.0 25 0.0 26 0.0 27 0.0 28 0.0 29 0.0 30 0.0 31 0.0 32 0.0 33 0.0 34 0.0 35 0.0 36 0.0 37 0.0 38 0.0 39 0.0 40 0.0 41 0.0 42 0.0 43 0.0 44 0.0 45 0.0 46 0.0 47 0.0 48 0.0 49 0.0 50 0.0 >>END_MODULE >>Sequence Length Distribution pass #Length Count 50 1666395.0 >>END_MODULE >>Sequence Duplication Levels fail #Total Deduplicated Percentage 18.459714780931417 #Duplication Level Percentage of deduplicated Percentage of total 1 80.19297847198254 14.803395100261712 2 7.002254972326536 2.5851925922501335 3 2.300258254834563 1.273863339201873 4 1.2014564172356534 0.8871417113555959 5 0.800396367823692 0.7387544330859414 6 0.5767507697883058 0.6387992825984856 7 0.44888892749045267 0.5800453098854373 8 0.36037268673649636 0.5321901609594936 9 0.29312901900254207 0.4869970276321038 >10 3.6363179174419296 16.62021330150165 >50 1.8814112470693316 25.387737989373843 >100 1.301831019582861 34.077917053238004 >500 0.0032949405709509993 0.3797829527702581 >1k 3.2949405709509997E-4 0.224378493396778 >5k 0.0 0.0 >10k+ 3.2949405709509997E-4 0.7835912524886666 >>END_MODULE >>Overrepresented sequences warn #Sequence Count Percentage Possible Source CGTTTTTTTTTTTTTTTTTTTTTTTTTTTTTTTTTTTTTTTTTTTTTTTT 12883 0.7731060162806538 No Hit GACCAGAAAAATGGTCCTGCCAAGCGGCTACAGTGTTCTTCTTTCAGATA 3689 0.2213760843017412 No Hit >>END_MODULE >>Adapter Content pass #Position Illumina Universal Adapter Illumina Small RNA 3' Adapter Illumina Small RNA 5' Adapter Nextera Transposase Sequence SOLID Small RNA Adapter 1 0.0 0.0 0.0 0.017282817099187168 0.0 2 0.0 0.0 0.0 0.09481545491915182 0.0 3 0.0 0.0 0.0 0.14390345626337092 0.0 4 0.0 0.0 0.0 0.22593682770291557 0.0 5 0.0 0.0 0.0 0.4142475223461424 0.0 6 0.0 0.0 0.0 0.61648048631927 0.0 7 0.0 0.0 0.0 0.7382403331743074 0.0 8 0.0 0.0 0.0 1.0604328505546403 0.0 9 0.0 0.0 0.0 1.209257108908752 0.0 10 0.0 0.0 0.0 1.4638786122137908 0.0 11 0.0 0.0 0.0 1.6964165158920903 0.0 12 0.0 0.0 0.0 1.8961290690382533 0.0 13 6.0009781594399886E-5 0.0 0.0 1.9799627339256298 0.0 14 6.0009781594399886E-5 0.0 0.0 2.0112878399179066 0.0 15 0.006361036849006388 0.0 0.0 2.0535347261603643 0.0 16 0.006361036849006388 0.0 0.0 2.1512906603776414 0.0 17 0.006361036849006388 0.0 0.0 2.2674095877628053 0.0 18 0.006361036849006388 0.0 0.0 2.4326765262737826 0.0 19 0.006361036849006388 0.0 0.0 2.510569222783314 0.0 20 0.006421046630600788 0.0 0.0 2.600103816922158 0.0 21 0.006421046630600788 0.0 0.0 2.7209635170532795 0.0 22 0.006421046630600788 0.0 0.0 2.833541867324374 0.0 23 0.006421046630600788 0.0 0.0 2.9685038661301792 0.0 24 0.006421046630600788 0.0 0.0 3.0630792819229535 0.0 25 0.006421046630600788 0.0 0.0 3.140311870834946 0.0 26 0.006421046630600788 0.0 0.0 3.2200048607923093 0.0 27 0.006421046630600788 0.0 0.0 3.3061789071618675 0.0 28 0.006421046630600788 0.0 0.0 3.392713012220992 0.0 29 0.006421046630600788 0.0 0.0 3.4894487801511644 0.0 30 0.006421046630600788 0.0 0.0 3.6181697616711523 0.0 31 0.006421046630600788 0.0 0.0 3.7383693542047354 0.0 32 0.006421046630600788 0.0 0.0 3.835105122134908 0.0 33 0.006421046630600788 0.0 0.0 3.9344213106736396 0.0 34 0.006421046630600788 0.0 0.0 4.044479250117769 0.0 35 0.006421046630600788 0.0 0.0 4.1898829509210005 0.0 36 0.006421046630600788 0.0 0.0 4.303121408789632 0.0 37 0.006421046630600788 0.0 0.0 4.416959964474209 0.0 38 0.006421046630600788 0.0 0.0 4.54190032975375 0.0 >>END_MODULE >>Kmer Content warn #Sequence Count PValue Obs/Exp Max Max Obs/Exp Position TCGCACA 20 7.8575034E-4 44.0 1 GTACACG 40 8.3164196E-9 44.0 1 CAACGTA 20 7.8575034E-4 44.0 26 CTATACG 45 4.802132E-10 44.0 1 ATTACGT 20 7.8575034E-4 44.0 35 ATTACGC 20 7.8575034E-4 44.0 27 TCCAACG 30 2.5284062E-6 44.0 37 TTACGTT 20 7.8575034E-4 44.0 36 CGTAAGA 25 4.443706E-5 44.0 38 TCGAGGT 30 2.5284062E-6 44.0 44 CACGTAC 25 4.443706E-5 44.0 37 CAATCGA 20 7.8575034E-4 44.0 26 CAATACG 25 4.443706E-5 44.0 1 ATACCCG 20 7.8575034E-4 44.0 1 ATCGATA 40 8.3164196E-9 44.0 15 TAATCGG 45 4.802132E-10 44.0 2 CGTTTTT 10455 0.0 43.221424 1 CGACGGT 220 0.0 43.0 28 AATGCGG 255 0.0 42.27451 2 CGGTCTA 220 0.0 42.0 31 >>END_MODULE