##FastQC 0.11.5 >>Basic Statistics pass #Measure Value Filename SRR1545919_1.fastq.gz File type Conventional base calls Encoding Illumina 1.5 Total Sequences 2211636 Sequences flagged as poor quality 0 Sequence length 50 %GC 45 >>END_MODULE >>Per base sequence quality pass #Base Mean Median Lower Quartile Upper Quartile 10th Percentile 90th Percentile 1 31.496883302677293 31.0 31.0 33.0 30.0 34.0 2 31.896424637689023 31.0 31.0 34.0 30.0 34.0 3 31.972276631416744 33.0 31.0 34.0 30.0 34.0 4 35.73220367185197 37.0 35.0 37.0 33.0 37.0 5 35.665573358364576 37.0 35.0 37.0 33.0 37.0 6 35.7194764418738 37.0 35.0 37.0 33.0 37.0 7 35.99476224839892 37.0 35.0 37.0 35.0 37.0 8 35.98396752449318 37.0 35.0 37.0 35.0 37.0 9 37.81401053337891 39.0 38.0 39.0 35.0 39.0 10 37.29190924727215 39.0 37.0 39.0 34.0 39.0 11 36.92813419568139 39.0 37.0 39.0 33.0 39.0 12 36.17946217189447 38.0 35.0 39.0 32.0 39.0 13 35.8576379657412 38.0 35.0 39.0 31.0 39.0 14 36.8245855104547 39.0 35.0 41.0 31.0 41.0 15 37.04557079013002 39.0 35.0 41.0 32.0 41.0 16 37.2278602808057 39.0 35.0 41.0 32.0 41.0 17 37.160150675789325 39.0 35.0 41.0 32.0 41.0 18 37.06843847721777 38.0 35.0 41.0 32.0 41.0 19 36.92585895689888 38.0 35.0 41.0 32.0 41.0 20 36.717930979600624 38.0 35.0 40.0 32.0 41.0 21 36.58892873872554 38.0 35.0 40.0 32.0 41.0 22 36.494243627794084 38.0 35.0 40.0 31.0 41.0 23 36.441371907492915 37.0 35.0 40.0 31.0 41.0 24 36.46618928250399 38.0 35.0 40.0 32.0 41.0 25 36.42961726070656 37.0 35.0 40.0 31.0 41.0 26 36.195472944010675 37.0 35.0 40.0 31.0 41.0 27 36.1720396123051 37.0 35.0 40.0 31.0 41.0 28 36.15849714871706 37.0 35.0 40.0 31.0 41.0 29 36.11609460146245 37.0 35.0 40.0 31.0 41.0 30 35.99347180096544 37.0 35.0 40.0 30.0 41.0 31 35.75367555963097 37.0 35.0 40.0 30.0 41.0 32 35.50461423127495 37.0 34.0 40.0 29.0 41.0 33 35.24071366174181 37.0 34.0 40.0 27.0 41.0 34 34.98993821768139 37.0 34.0 40.0 26.0 41.0 35 34.75636135421923 37.0 34.0 40.0 24.0 41.0 36 34.56872514283544 37.0 34.0 40.0 23.0 41.0 37 34.47256465349633 36.0 34.0 40.0 23.0 41.0 38 34.38675803794114 36.0 34.0 40.0 23.0 41.0 39 34.29645882052924 36.0 34.0 40.0 23.0 41.0 40 34.137016670012606 36.0 33.0 40.0 23.0 41.0 41 34.08728606334858 36.0 34.0 40.0 22.0 41.0 42 34.04647509807219 36.0 33.0 40.0 22.0 41.0 43 33.92162227418979 35.0 33.0 40.0 22.0 41.0 44 33.81529555496474 35.0 33.0 40.0 22.0 41.0 45 33.723606868399685 35.0 33.0 40.0 22.0 41.0 46 33.68236680900473 35.0 33.0 40.0 22.0 41.0 47 33.600489411458305 35.0 33.0 40.0 21.0 41.0 48 33.50934737904429 35.0 33.0 40.0 20.0 41.0 49 33.45046201092766 35.0 33.0 40.0 20.0 41.0 50 33.29585836005563 35.0 33.0 40.0 20.0 41.0 >>END_MODULE >>Per sequence quality scores pass #Quality Count 9 1.0 10 4.0 11 2.0 12 3.0 13 12.0 14 18.0 15 47.0 16 167.0 17 423.0 18 976.0 19 1955.0 20 3567.0 21 5876.0 22 9003.0 23 13470.0 24 19960.0 25 30330.0 26 42768.0 27 50768.0 28 53199.0 29 52979.0 30 57571.0 31 66960.0 32 81601.0 33 107403.0 34 194737.0 35 325788.0 36 139884.0 37 179565.0 38 277196.0 39 495403.0 >>END_MODULE >>Per base sequence content fail #Base G A T C 1 32.923274896954105 22.405450083105897 28.34033267680577 16.33094234313422 2 33.63293055457589 24.697915931916466 29.142318175323606 12.526835338184043 3 28.334364244387412 23.989028936045536 34.94548831724569 12.731118502321358 4 24.488613858700077 26.73238272482452 34.766616206283494 14.012387210191912 5 21.774243139467796 31.443691457364594 33.149623174880496 13.632442228287115 6 19.502531157930147 40.905148948561155 29.506980353005645 10.085339540503048 7 86.95183113315211 2.9674865122470426 8.9969145013013 1.0837678532995485 8 88.50113671508332 1.8323991832290665 8.63501046284289 1.0314536388447286 9 85.45795962807622 3.248635851469229 9.575762015087474 1.7176425053670679 10 48.83244801585794 27.111332967992922 14.676284885939639 9.379934130209492 11 41.13868647462783 19.84983062312243 26.361073883767496 12.650409018482245 12 37.830592375960606 20.43754035474192 27.541557471482648 14.190309797814828 13 21.59880739868586 34.99545133105086 28.36131262106423 15.044428649199054 14 16.052822435518323 36.907700905573975 31.381746363325615 15.657730295582095 15 14.783354946293151 22.483446643118487 46.97540644120461 15.75779196938375 16 17.811837029239893 18.47026364193746 44.888941941621496 18.828957387201147 17 18.544100385416044 18.709362661848512 31.37451189978821 31.37202505294723 18 22.312170718870554 22.02776587105654 35.759953265365546 19.900110144707355 19 26.801652713195118 23.768558659743285 28.897612446171067 20.532176180890527 20 29.101850394911278 22.454237496586238 28.733344908474994 19.71056720002749 21 22.240685176041627 26.728765493055818 31.10810278002348 19.922446550879076 22 22.96571406868038 22.238198329200646 29.859027434894347 24.937060167224626 23 19.254434273994455 27.767227518452405 28.99785498156116 23.980483225991982 24 19.755918243327564 23.19088674628194 39.85013808782277 17.20305692256773 25 18.294059239404675 24.325974075299914 36.403051858443256 20.97691482685216 26 17.640425458800635 30.726530043822763 30.103733164046886 21.529311333329716 27 17.492932833431905 29.90871915631686 32.529855726710906 20.06849228354033 28 16.009415654293928 25.695412807532524 39.597293587190656 18.697877950982893 29 16.816329631096618 22.750940932413833 38.53884635627201 21.89388308021754 30 19.59802607662382 27.633028219833644 34.12320110542603 18.645744598116508 31 27.78938306303569 24.86679544011763 27.901833755645143 19.441987741201537 32 28.100555425938083 24.698820239858637 28.646621776820417 18.55400255738286 33 26.718998967280328 25.703958517586077 27.62954663425627 19.947495880877323 34 19.481144275097712 26.76285790247581 30.197193389870662 23.55880443255581 35 20.215171031761102 25.34521955692528 32.05884693502909 22.380762476284524 36 27.943567567176515 24.851874359071747 27.93868430428877 19.265873769462967 37 20.618085435397145 30.067786923345434 29.287685677028225 20.026441964229193 38 20.962265038188924 30.451303921621818 26.325172858463148 22.261258181726106 39 20.630745746587596 29.987936532051386 28.109191566785857 21.272126154575165 40 24.145022056070708 25.891150261616286 26.785149093250425 23.178678589062578 41 18.778361357836463 24.054998200427193 29.173155076151776 27.99348536558457 42 22.83155998545873 24.49571267604615 25.53060268507114 27.142124653423984 43 21.902835728845073 25.949613770077896 26.79057494090348 25.356975560173556 44 19.980683982355142 28.496054504448292 28.945495551709232 22.577765961487334 45 18.58827582839129 33.47295847960514 25.081523360987067 22.857242331016497 46 22.430770705486797 30.445154627615032 26.811916608338805 20.312158058559366 47 21.101935399857844 26.790439294712147 28.890649275016322 23.216976030413687 48 22.863979425185697 24.417987408416213 31.34159509069304 21.376438075705043 49 21.055047033056074 23.997710292290414 32.11098028789547 22.836262386758037 50 20.181892499489066 29.43300796333574 28.954538631130983 21.430560906044214 >>END_MODULE >>Per sequence GC content fail #GC Content Count 0 708.0 1 1943.5 2 3179.0 3 19783.5 4 36388.0 5 26325.5 6 16263.0 7 16300.0 8 16337.0 9 16720.0 10 17103.0 11 16809.5 12 16516.0 13 15474.5 14 14433.0 15 13378.5 16 12324.0 17 11569.0 18 10814.0 19 9790.5 20 8767.0 21 8743.5 22 8720.0 23 9027.0 24 9334.0 25 10767.0 26 12200.0 27 14684.0 28 17168.0 29 21468.5 30 25769.0 31 31227.0 32 36685.0 33 41700.0 34 46715.0 35 53850.5 36 60986.0 37 66246.5 38 71507.0 39 85728.5 40 99950.0 41 130560.5 42 161171.0 43 190472.5 44 219774.0 45 213849.5 46 207925.0 47 195913.5 48 183902.0 49 177564.0 50 171226.0 51 158561.5 52 145897.0 53 131447.0 54 116997.0 55 108233.5 56 99470.0 57 92773.5 58 86077.0 59 79428.0 60 72779.0 61 65480.0 62 58181.0 63 51689.0 64 45197.0 65 39338.5 66 33480.0 67 28530.5 68 23581.0 69 19933.0 70 16285.0 71 13983.5 72 11682.0 73 9443.0 74 7204.0 75 5827.5 76 4451.0 77 3298.5 78 2146.0 79 1677.5 80 1209.0 81 898.5 82 588.0 83 432.5 84 277.0 85 240.0 86 203.0 87 118.5 88 34.0 89 26.5 90 19.0 91 14.5 92 10.0 93 7.0 94 4.0 95 2.5 96 1.0 97 0.5 98 0.0 99 0.0 100 0.0 >>END_MODULE >>Per base N content pass #Base N-Count 1 0.0 2 0.0 3 0.0 4 0.0 5 0.0 6 0.0 7 0.0 8 0.0 9 0.0 10 0.0 11 0.0 12 0.0 13 0.0 14 0.0 15 0.0 16 0.0 17 0.0 18 0.0 19 0.0 20 0.0 21 0.0 22 0.0 23 0.0 24 0.0 25 0.0 26 0.0 27 0.0 28 0.0 29 0.0 30 0.0 31 0.0 32 0.0 33 0.0 34 0.0 35 0.0 36 0.0 37 0.0 38 0.0 39 0.0 40 0.0 41 0.0 42 0.0 43 0.0 44 0.0 45 0.0 46 0.0 47 0.0 48 0.0 49 0.0 50 0.0 >>END_MODULE >>Sequence Length Distribution pass #Length Count 50 2211636.0 >>END_MODULE >>Sequence Duplication Levels fail #Total Deduplicated Percentage 18.82494297506721 #Duplication Level Percentage of deduplicated Percentage of total 1 79.28286361677624 14.924953864858434 2 7.063439683369088 2.6593769849449975 3 2.445385111117589 1.38102705806601 4 1.3130527197082944 0.9887257028706221 5 0.9041414997574971 0.8510206087163312 6 0.6615386989222168 0.7472056969806532 7 0.4918874086980161 0.6481826693225613 8 0.39234481377984876 0.5908694996775212 9 0.3122974150703725 0.5291082926964591 >10 4.194584449160215 19.412985367862227 >50 1.7337174074131947 23.438440321879032 >100 1.2008546167191476 32.33572193830559 >500 0.003405989569668143 0.45340274163178373 >1k 2.432849692620102E-4 0.13483006781454257 >5k 0.0 0.0 >10k+ 2.432849692620102E-4 0.9041491843731995 >>END_MODULE >>Overrepresented sequences warn #Sequence Count Percentage Possible Source CGTTTTTTTTTTTTTTTTTTTTTTTTTTTTTTTTTTTTTTTTTTTTTTTT 19742 0.8926423697208762 No Hit GACCAGAAAAATGGTCCTGCCAAGCGGCTACAGTGTTCTTCTTTCAGATA 2944 0.13311412908815012 No Hit >>END_MODULE >>Adapter Content pass #Position Illumina Universal Adapter Illumina Small RNA 3' Adapter Illumina Small RNA 5' Adapter Nextera Transposase Sequence SOLID Small RNA Adapter 1 0.0 0.0 0.0 0.01971391313941354 0.0 2 0.0 0.0 0.0 0.07487669761208444 0.0 3 0.0 0.0 0.0 0.11199853863836544 0.0 4 0.0 0.0 0.0 0.17692784888652563 0.0 5 0.0 0.0 0.0 0.31334270196361425 0.0 6 0.0 0.0 0.0 0.4838047490635891 0.0 7 0.0 0.0 0.0 0.5976571189834132 0.0 8 0.0 0.0 0.0 0.9163804532029683 0.0 9 0.0 0.0 0.0 1.0584020155215415 0.0 10 0.0 0.0 0.0 1.2830773237549036 0.0 11 0.0 0.0 0.0 1.457925264374427 0.0 12 0.001537323501697386 0.0 0.0 1.614777476944669 0.0 13 0.001537323501697386 0.0 0.0 1.6782598944853493 0.0 14 0.001537323501697386 0.0 0.0 1.700822377642614 0.0 15 0.001537323501697386 0.0 0.0 1.7338748329291076 0.0 16 0.001537323501697386 0.0 0.0 1.8082993765701048 0.0 17 0.001537323501697386 0.0 0.0 1.9016691715996665 0.0 18 0.001537323501697386 0.0 0.0 2.046855811715852 0.0 19 0.001537323501697386 0.0 0.0 2.113955461025232 0.0 20 0.001537323501697386 0.0 0.0 2.18833478926912 0.0 21 0.001537323501697386 0.0 0.0 2.291245033088628 0.0 22 0.001537323501697386 0.0 0.0 2.4009828018715558 0.0 23 0.001537323501697386 0.0 0.0 2.5227478662854104 0.0 24 0.001537323501697386 0.0 0.0 2.6132238759000126 0.0 25 0.001537323501697386 0.0 0.0 2.6918986668692315 0.0 26 0.001537323501697386 0.0 0.0 2.773557674047628 0.0 27 0.001537323501697386 0.0 0.0 2.8572965894930267 0.0 28 0.0015825388988061327 0.0 0.0 2.9471395835481067 0.0 29 0.0015825388988061327 0.0 0.0 3.0465230263931318 0.0 30 0.0015825388988061327 0.0 0.0 3.186057741870724 0.0 31 0.0015825388988061327 0.0 0.0 3.304115143721661 0.0 32 0.0015825388988061327 0.0 0.0 3.4070253875411685 0.0 33 0.0015825388988061327 0.0 0.0 3.519928234121709 0.0 34 0.0015825388988061327 0.0 0.0 3.6435019144199137 0.0 35 0.0015825388988061327 0.0 0.0 3.797279479986761 0.0 36 0.0015825388988061327 0.0 0.0 3.915789035808786 0.0 37 0.0015825388988061327 0.0 0.0 4.038820131341685 0.0 38 0.0015825388988061327 0.0 0.0 4.186131895121982 0.0 >>END_MODULE >>Kmer Content fail #Sequence Count PValue Obs/Exp Max Max Obs/Exp Position CCACTCG 30 2.5287827E-6 44.000004 1 CGAACTT 45 4.802132E-10 44.0 25 TATGCGC 35 1.446897E-7 44.0 25 CGTAAGA 20 7.8580633E-4 44.0 22 TAAGCGT 25 4.4441804E-5 44.0 2 CGTTTTT 14540 0.0 43.40991 1 ACGTAAG 90 0.0 41.555557 1 TTCGCGA 55 7.8216544E-11 40.0 15 GTAGGGC 810 0.0 38.839508 4 CGTAAGG 490 0.0 38.612244 2 TATACGG 200 0.0 38.5 2 TCTAGCG 75 0.0 38.13333 1 TAATGCG 150 0.0 38.13333 1 GCGTAAT 75 0.0 38.13333 9 CGTAAAT 110 0.0 38.0 16 ATTACGG 145 0.0 37.931038 2 GTTTTTT 17205 0.0 37.900608 2 TTAGCGG 495 0.0 37.77778 2 AAGTACG 105 0.0 37.714287 1 TGACGTA 35 7.29326E-6 37.714287 29 >>END_MODULE