##FastQC 0.11.5 >>Basic Statistics pass #Measure Value Filename SRR1545917_1.fastq.gz File type Conventional base calls Encoding Illumina 1.5 Total Sequences 3344503 Sequences flagged as poor quality 0 Sequence length 50 %GC 42 >>END_MODULE >>Per base sequence quality pass #Base Mean Median Lower Quartile Upper Quartile 10th Percentile 90th Percentile 1 31.73858537426936 31.0 31.0 33.0 30.0 34.0 2 32.17221811432072 33.0 31.0 34.0 30.0 34.0 3 32.213706789917666 34.0 31.0 34.0 30.0 34.0 4 35.898259920831286 37.0 35.0 37.0 35.0 37.0 5 35.89416125505045 37.0 35.0 37.0 35.0 37.0 6 35.946067323007334 37.0 35.0 37.0 35.0 37.0 7 36.16764164959637 37.0 35.0 37.0 35.0 37.0 8 36.143182111064036 37.0 35.0 37.0 35.0 37.0 9 37.961569476840054 39.0 39.0 39.0 35.0 39.0 10 37.63231457708365 39.0 37.0 39.0 35.0 39.0 11 37.350732530364006 39.0 37.0 39.0 34.0 39.0 12 36.96354406020865 39.0 35.0 39.0 33.0 39.0 13 36.85324336680218 39.0 35.0 39.0 33.0 39.0 14 37.999549708880515 40.0 36.0 41.0 33.0 41.0 15 38.13532234834294 40.0 36.0 41.0 33.0 41.0 16 38.1631572762829 40.0 36.0 41.0 34.0 41.0 17 38.08833748990508 40.0 36.0 41.0 34.0 41.0 18 37.98706863172196 40.0 36.0 41.0 34.0 41.0 19 37.92355276703295 40.0 36.0 41.0 34.0 41.0 20 37.81098835910747 40.0 35.0 41.0 34.0 41.0 21 37.709705747012336 40.0 35.0 41.0 33.0 41.0 22 37.706731912035956 40.0 35.0 41.0 33.0 41.0 23 37.6795517899072 40.0 35.0 41.0 33.0 41.0 24 37.65088385329599 40.0 35.0 41.0 33.0 41.0 25 37.58890872575088 40.0 35.0 41.0 33.0 41.0 26 37.50839930476965 40.0 35.0 41.0 33.0 41.0 27 37.42815360010142 40.0 35.0 41.0 33.0 41.0 28 37.39637488738985 39.0 35.0 41.0 33.0 41.0 29 37.34624098109644 39.0 35.0 41.0 33.0 41.0 30 37.237106679228575 39.0 35.0 41.0 33.0 41.0 31 37.108390394626646 39.0 35.0 41.0 32.0 41.0 32 36.94684053206112 39.0 35.0 41.0 32.0 41.0 33 36.79077160343405 39.0 35.0 41.0 31.0 41.0 34 36.63203830285098 39.0 35.0 41.0 31.0 41.0 35 36.44254617203214 39.0 35.0 41.0 30.0 41.0 36 36.32613126673829 39.0 35.0 41.0 30.0 41.0 37 36.273434049842386 39.0 35.0 41.0 30.0 41.0 38 36.197277742014286 39.0 35.0 41.0 30.0 41.0 39 36.15416042383577 39.0 35.0 41.0 30.0 41.0 40 36.03850736566838 39.0 35.0 41.0 29.0 41.0 41 35.91910188150526 39.0 35.0 41.0 29.0 41.0 42 35.89767089459929 39.0 35.0 41.0 29.0 41.0 43 35.853655087168406 39.0 35.0 41.0 29.0 41.0 44 35.74056504060543 39.0 35.0 41.0 28.0 41.0 45 35.640140254022796 38.0 35.0 40.0 27.0 41.0 46 35.60074127605806 38.0 35.0 40.0 27.0 41.0 47 35.531966932007535 38.0 35.0 40.0 27.0 41.0 48 35.47634461682349 38.0 35.0 40.0 27.0 41.0 49 35.41916093362751 38.0 35.0 40.0 27.0 41.0 50 35.27568819642261 38.0 35.0 40.0 27.0 41.0 >>END_MODULE >>Per sequence quality scores pass #Quality Count 9 1.0 10 4.0 11 3.0 12 3.0 13 7.0 14 19.0 15 40.0 16 129.0 17 315.0 18 754.0 19 1633.0 20 2937.0 21 4898.0 22 8054.0 23 12194.0 24 18986.0 25 28791.0 26 41244.0 27 49828.0 28 51761.0 29 53536.0 30 59334.0 31 70208.0 32 87253.0 33 114483.0 34 202898.0 35 387166.0 36 192032.0 37 261091.0 38 475472.0 39 1219429.0 >>END_MODULE >>Per base sequence content fail #Base G A T C 1 33.03555117157915 22.66273942645589 29.5281840082069 14.773525393758055 2 31.955091683278503 24.78783843219755 30.537840749432725 12.719229135091222 3 28.23394088748014 24.365443834255792 34.16731873166207 13.233296546601991 4 24.830415759830384 27.203533678995058 33.568036865268176 14.398013695906386 5 22.177345931518076 32.08883352773192 31.93021504241437 13.803605498335628 6 20.672817455986735 40.465623741404926 28.674095971808068 10.187462830800271 7 88.60443539742676 3.202837611447799 6.986389308067596 1.2063376830578414 8 90.3423617799117 2.227326451792688 6.361513205400025 1.0687985628955932 9 85.89733661473767 4.847416791074787 7.519682296592349 1.7355642975951884 10 41.48798790134139 37.36899025056937 13.288132795814505 7.854889052274733 11 30.330874273397274 23.09174188212718 32.57709740430791 14.000286440167642 12 30.17401987679485 23.303910924881812 31.453432692391065 15.06863650593227 13 20.742424210712322 33.171356102835006 30.65325401113409 15.432965675318574 14 16.42800141007498 35.19093868356524 31.836299743190544 16.544760163169236 15 15.878712023879181 26.65726417348108 41.40154755430029 16.06247624833944 16 18.616159112430157 24.434721691085343 39.443319381085914 17.505799815398582 17 18.74311370030166 23.78233776438532 32.12629798807177 25.348250547241246 18 20.580875544139143 24.42778493545977 35.67806636740945 19.313273152991638 19 23.751630660818662 25.465457797466467 31.31430888236608 19.46860265934879 20 25.87795555871829 25.34310778013953 30.919481908074236 17.859454753067943 21 21.920536474328173 27.170225292068807 32.20816366437704 18.70107456922598 22 21.490607124586226 24.59193488539254 31.437226996058904 22.480230993962333 23 18.72475521774087 28.3713903082162 31.807775325661243 21.096079148381687 24 17.502959333569144 25.754050751337342 39.367164568248256 17.375825346845257 25 17.23735933261235 28.23229639799994 35.457465578592696 19.072878690795015 26 17.79717345148143 32.13912500601734 31.16412214311065 18.899579399390582 27 17.2901025952137 31.768756075267383 32.475168956344184 18.46597237317473 28 16.133548093692845 28.295863391361888 37.620268243144054 17.95032027180122 29 17.075780766230437 25.10671989231285 36.9422302805529 20.87526906090382 30 18.26686954683551 29.188342782171222 33.747645016314834 18.79714265467844 31 23.57348760039982 27.44620052665523 30.720379081735018 18.259932791209934 32 24.366131529856602 27.254901550394784 30.661865156048595 17.71710176370002 33 23.629938439283805 27.911441550508403 29.40882397175305 19.04979603845474 34 19.04459347173556 27.616868634891347 31.931530633998534 21.40700725937456 35 19.333904021015975 27.190258163918525 32.90802848734177 20.56780932772373 36 23.885791102594318 27.626765471581276 30.41199245448427 18.07545097134014 37 19.576690467911074 31.520318564522142 30.873286703584956 18.029704263981824 38 19.214454285135936 30.83749663253404 30.670536100580563 19.277512981749457 39 19.409909334809985 31.620423124153273 30.394291767715565 18.575375773321177 40 21.75462243568028 28.153331003141574 29.847603664879358 20.244442896298793 41 18.116802406815 27.037589740538433 30.80936091251824 24.036246940128326 42 20.01541036141992 27.45905744440953 29.408524973665745 23.11700722050481 43 20.524933002003586 27.51338539687362 29.62694307644514 22.334738524677658 44 19.55806288707171 29.72600114277069 30.764780297700433 19.951155672457162 45 17.808744677460297 33.67020451170174 28.56071589710041 19.960334913737558 46 19.654878467742442 31.472927367683628 29.555273234917117 19.316920929656813 47 19.49847256827098 29.029694397044942 29.891287285435236 21.58054574924884 48 19.924544842686643 27.135631213367127 32.852325143676055 20.087498800270176 49 20.006679617270485 27.045961686983087 33.09125451524487 19.856104180501557 50 18.99304620148345 31.50979383184886 30.405683594842042 19.09147637182565 >>END_MODULE >>Per sequence GC content warn #GC Content Count 0 2388.0 1 4206.0 2 6024.0 3 23819.0 4 41614.0 5 30018.0 6 18422.0 7 17858.0 8 17294.0 9 17191.0 10 17088.0 11 16477.5 12 15867.0 13 15191.5 14 14516.0 15 13889.5 16 13263.0 17 13369.5 18 13476.0 19 13528.0 20 13580.0 21 15392.5 22 17205.0 23 19913.0 24 22621.0 25 29432.0 26 36243.0 27 44505.5 28 52768.0 29 63769.0 30 74770.0 31 87184.5 32 99599.0 33 115716.5 34 131834.0 35 149346.0 36 166858.0 37 173364.5 38 179871.0 39 205221.0 40 230571.0 41 254865.5 42 279160.0 43 302725.0 44 326290.0 45 318052.0 46 309814.0 47 298199.0 48 286584.0 49 266393.0 50 246202.0 51 226177.5 52 206153.0 53 182956.5 54 159760.0 55 138698.0 56 117636.0 57 99496.0 58 81356.0 59 70030.5 60 58705.0 61 47226.5 62 35748.0 63 28686.0 64 21624.0 65 17032.0 66 12440.0 67 9685.0 68 6930.0 69 5522.5 70 4115.0 71 3459.0 72 2803.0 73 2146.0 74 1489.0 75 1150.0 76 811.0 77 652.5 78 494.0 79 367.5 80 241.0 81 183.0 82 125.0 83 97.0 84 69.0 85 55.0 86 41.0 87 32.5 88 24.0 89 16.0 90 8.0 91 6.0 92 4.0 93 4.0 94 4.0 95 2.5 96 1.0 97 0.5 98 0.0 99 0.0 100 0.0 >>END_MODULE >>Per base N content pass #Base N-Count 1 0.0 2 0.0 3 0.0 4 0.0 5 0.0 6 0.0 7 0.0 8 0.0 9 0.0 10 0.0 11 0.0 12 0.0 13 0.0 14 0.0 15 0.0 16 0.0 17 0.0 18 0.0 19 0.0 20 0.0 21 0.0 22 0.0 23 0.0 24 0.0 25 0.0 26 0.0 27 0.0 28 0.0 29 0.0 30 0.0 31 0.0 32 0.0 33 0.0 34 0.0 35 0.0 36 0.0 37 0.0 38 0.0 39 0.0 40 0.0 41 0.0 42 0.0 43 0.0 44 0.0 45 0.0 46 0.0 47 0.0 48 0.0 49 0.0 50 0.0 >>END_MODULE >>Sequence Length Distribution pass #Length Count 50 3344503.0 >>END_MODULE >>Sequence Duplication Levels fail #Total Deduplicated Percentage 14.193362789058753 #Duplication Level Percentage of deduplicated Percentage of total 1 78.1720869883484 11.095247906034881 2 6.865042391768069 1.9487607445726363 3 2.356783180084745 1.0035203607028313 4 1.191397550482394 0.6763975063997023 5 0.8415819470277155 0.5972438945443397 6 0.6121237498658001 0.5212856672186614 7 0.4640568296522337 0.4610568856596214 8 0.3779946495153287 0.4292012154315337 9 0.34738935250048053 0.4437560798185981 >10 4.854584072164999 16.805337897488574 >50 1.925001751959535 19.92616192285938 >100 1.9870396533591899 44.86534791773881 >500 0.003848778212280607 0.3373223762249084 >1k 8.552840471734681E-4 0.23155823037301404 >5k 0.0 0.0 >10k+ 2.1382101179336704E-4 0.6578013949325138 >>END_MODULE >>Overrepresented sequences warn #Sequence Count Percentage Possible Source CGTTTTTTTTTTTTTTTTTTTTTTTTTTTTTTTTTTTTTTTTTTTTTTTT 21675 0.6480783542427678 No Hit GACCAGAAAAATGGTCCTGCCAAGCGGCTACAGTGTTCTTCTTTCAGATA 3843 0.1149049649529392 No Hit >>END_MODULE >>Adapter Content pass #Position Illumina Universal Adapter Illumina Small RNA 3' Adapter Illumina Small RNA 5' Adapter Nextera Transposase Sequence SOLID Small RNA Adapter 1 5.9799617461847095E-5 0.0 0.0 0.016385095184546103 0.0 2 5.9799617461847095E-5 0.0 0.0 0.053879455333124236 0.0 3 8.969942619277065E-5 0.0 0.0 0.07893549504963816 0.0 4 8.969942619277065E-5 0.0 0.0 0.11959923492369419 0.0 5 8.969942619277065E-5 0.0 0.0 0.21402283089595076 0.0 6 8.969942619277065E-5 0.0 0.0 0.3237850287471711 0.0 7 1.1959923492369419E-4 0.0 0.0 0.40017904005468075 0.0 8 1.1959923492369419E-4 0.0 0.0 0.5929132071342139 0.0 9 1.1959923492369419E-4 0.0 0.0 0.6735828910902457 0.0 10 1.1959923492369419E-4 0.0 0.0 0.8014643730324057 0.0 11 1.1959923492369419E-4 0.0 0.0 0.9152630450623007 0.0 12 1.1959923492369419E-4 0.0 0.0 1.019254579828453 0.0 13 1.1959923492369419E-4 0.0 0.0 1.0562406432286053 0.0 14 1.1959923492369419E-4 0.0 0.0 1.0713998462551835 0.0 15 1.1959923492369419E-4 0.0 0.0 1.0930174079676411 0.0 16 1.1959923492369419E-4 0.0 0.0 1.1412756992593518 0.0 17 1.1959923492369419E-4 0.0 0.0 1.2066366811451508 0.0 18 1.1959923492369419E-4 0.0 0.0 1.2971733019823872 0.0 19 1.1959923492369419E-4 0.0 0.0 1.345371793656636 0.0 20 1.1959923492369419E-4 0.0 0.0 1.3961117690730132 0.0 21 1.1959923492369419E-4 0.0 0.0 1.4637750362310933 0.0 22 1.1959923492369419E-4 0.0 0.0 1.5387039569107877 0.0 23 1.1959923492369419E-4 0.0 0.0 1.6251742037606185 0.0 24 1.1959923492369419E-4 0.0 0.0 1.691820877421847 0.0 25 1.1959923492369419E-4 0.0 0.0 1.7480026180272525 0.0 26 1.1959923492369419E-4 0.0 0.0 1.8046926553810836 0.0 27 1.1959923492369419E-4 0.0 0.0 1.8602763998118703 0.0 28 1.1959923492369419E-4 0.0 0.0 1.9228566994856935 0.0 29 1.1959923492369419E-4 0.0 0.0 1.994915238527219 0.0 30 1.1959923492369419E-4 0.0 0.0 2.091551420345564 0.0 31 1.1959923492369419E-4 0.0 0.0 2.1719221062142866 0.0 32 1.1959923492369419E-4 0.0 0.0 2.2505586031766156 0.0 33 1.1959923492369419E-4 0.0 0.0 2.328627003773057 0.0 34 1.1959923492369419E-4 0.0 0.0 2.414977651387964 0.0 35 1.1959923492369419E-4 0.0 0.0 2.520224978120815 0.0 36 1.1959923492369419E-4 0.0 0.0 2.615635267781192 0.0 37 1.1959923492369419E-4 0.0 0.0 2.7076967788637054 0.0 38 1.1959923492369419E-4 0.0 0.0 2.8005057851644923 0.0 >>END_MODULE >>Kmer Content fail #Sequence Count PValue Obs/Exp Max Max Obs/Exp Position TCGCACC 35 1.447188E-7 44.0 21 CGTTTTT 13600 0.0 42.350002 1 CACATCG 60 3.6379788E-12 40.333336 18 CTATACG 120 0.0 40.333336 1 GACCGAT 1105 0.0 39.619907 9 CGTAAGG 560 0.0 39.285713 2 TGGGCGA 1395 0.0 38.795696 6 GGACCGA 1185 0.0 38.616035 8 TGTAGCG 240 0.0 38.500004 1 TATTGCG 195 0.0 38.358974 1 CGACGGT 155 0.0 38.322582 28 TATAGCG 290 0.0 37.931038 1 CTACGGG 610 0.0 37.868855 3 TCGCCTA 35 7.2943785E-6 37.714287 12 CGTCGGA 35 7.2943785E-6 37.714287 21 ACTGCGG 525 0.0 37.714283 2 AAGGGAT 7390 0.0 37.391068 5 CGCGAGG 265 0.0 37.358494 2 GGGACCG 1495 0.0 37.23077 7 TCGAACG 65 1.0913936E-11 37.23077 1 >>END_MODULE