##FastQC 0.11.5 >>Basic Statistics pass #Measure Value Filename SRR1545915_1.fastq.gz File type Conventional base calls Encoding Illumina 1.5 Total Sequences 1045806 Sequences flagged as poor quality 0 Sequence length 50 %GC 44 >>END_MODULE >>Per base sequence quality pass #Base Mean Median Lower Quartile Upper Quartile 10th Percentile 90th Percentile 1 31.787683375310525 31.0 31.0 33.0 30.0 34.0 2 32.20158614504029 33.0 31.0 34.0 30.0 34.0 3 32.224131435467 34.0 31.0 34.0 30.0 34.0 4 35.89568906661465 37.0 35.0 37.0 35.0 37.0 5 35.87420993951077 37.0 35.0 37.0 35.0 37.0 6 35.92480058442962 37.0 35.0 37.0 35.0 37.0 7 36.15520469379598 37.0 35.0 37.0 35.0 37.0 8 36.113088852043305 37.0 35.0 37.0 35.0 37.0 9 37.91305557627323 39.0 39.0 39.0 35.0 39.0 10 37.702906657640135 39.0 38.0 39.0 35.0 39.0 11 37.33352935439269 39.0 37.0 39.0 35.0 39.0 12 35.93476323524631 37.0 35.0 39.0 33.0 39.0 13 35.49264395117259 35.0 35.0 39.0 32.0 39.0 14 36.302654603243816 36.0 35.0 41.0 32.0 41.0 15 36.62606927097377 36.0 35.0 41.0 33.0 41.0 16 36.79691740150659 36.0 35.0 41.0 33.0 41.0 17 36.76782883249857 36.0 35.0 41.0 33.0 41.0 18 36.755022442020795 36.0 35.0 40.0 33.0 41.0 19 36.61778283926464 36.0 35.0 40.0 33.0 41.0 20 36.39034390699614 36.0 35.0 40.0 33.0 41.0 21 36.228964071730324 35.0 35.0 40.0 32.0 41.0 22 36.18435637202311 35.0 35.0 40.0 32.0 41.0 23 36.23511435199263 35.0 35.0 40.0 33.0 41.0 24 36.17318986504189 35.0 35.0 40.0 33.0 41.0 25 36.08195497061597 35.0 35.0 40.0 32.0 41.0 26 35.96035689219607 35.0 35.0 40.0 32.0 41.0 27 35.86155940968019 35.0 35.0 40.0 32.0 41.0 28 35.91181729689828 36.0 35.0 40.0 32.0 41.0 29 35.927384237611946 36.0 35.0 40.0 32.0 41.0 30 35.852942132670876 36.0 35.0 40.0 32.0 41.0 31 35.5742929376959 35.0 35.0 40.0 31.0 41.0 32 35.334424357863696 35.0 35.0 40.0 31.0 41.0 33 35.1625779542286 35.0 35.0 40.0 30.0 41.0 34 35.0157103707571 35.0 35.0 40.0 30.0 41.0 35 34.83403614054615 35.0 34.0 40.0 29.0 41.0 36 34.62141257556373 35.0 34.0 40.0 27.0 41.0 37 34.521674191962944 35.0 34.0 40.0 27.0 41.0 38 34.50227958149026 35.0 34.0 40.0 27.0 41.0 39 34.49016930482327 35.0 34.0 40.0 27.0 41.0 40 34.30342147587602 35.0 34.0 40.0 25.0 41.0 41 34.264597831720224 35.0 34.0 40.0 25.0 41.0 42 34.226065828652736 35.0 34.0 40.0 25.0 41.0 43 34.143276095184 35.0 34.0 40.0 26.0 41.0 44 34.03928166409449 35.0 34.0 40.0 25.0 41.0 45 33.948106054086516 35.0 34.0 39.0 24.0 41.0 46 33.953885328636474 35.0 34.0 39.0 24.0 41.0 47 33.91911023650658 35.0 34.0 39.0 24.0 41.0 48 33.89488490217115 35.0 34.0 39.0 24.0 41.0 49 33.884222312742516 35.0 34.0 39.0 24.0 41.0 50 33.64741070523596 35.0 34.0 39.0 24.0 41.0 >>END_MODULE >>Per sequence quality scores pass #Quality Count 11 1.0 12 0.0 13 1.0 14 4.0 15 17.0 16 75.0 17 150.0 18 410.0 19 781.0 20 1391.0 21 2414.0 22 3642.0 23 5390.0 24 7825.0 25 11164.0 26 15972.0 27 19313.0 28 20161.0 29 20449.0 30 23180.0 31 27180.0 32 34849.0 33 47769.0 34 110395.0 35 277013.0 36 49513.0 37 55068.0 38 91719.0 39 219960.0 >>END_MODULE >>Per base sequence content fail #Base G A T C 1 32.89271623991448 23.124269702028865 28.895799029647947 15.08721502840871 2 31.952484495212307 25.775143764713533 30.010154847074887 12.262216892999275 3 28.692319608034378 24.723227826193387 34.16168964415963 12.422762921612613 4 26.184397488635557 26.977087528662103 32.80034729194516 14.038167690757177 5 23.295525173885025 32.39606580952873 31.622117295177116 12.686291721409132 6 20.881884403034597 40.04595498591517 28.832020470335802 10.240140140714434 7 85.4287506478257 5.157266261620224 7.920493858325541 1.4934892322285394 8 87.79333834382285 3.5866116660260126 7.338932842228865 1.2811171479222723 9 84.10594316727959 5.100372344392746 8.645293677794925 2.1483908105327374 10 63.85782831615041 16.36546357546237 12.535498935749079 7.241209172638137 11 60.19233012623756 14.943784984978093 16.702619797553275 8.16126509123107 12 51.42339975100545 20.895653687203936 18.436689022629434 9.244257539161183 13 18.40570813324842 52.497308296184954 19.40809289677053 9.688890673796097 14 11.377540385119229 52.394994865204445 26.731822154395747 9.495642595280577 15 10.418471494713168 20.79620885709204 58.94888726972306 9.836432378471724 16 10.944190413900857 14.52439553798697 56.6926370665305 17.83877698158167 17 12.031390143104934 15.56110789190347 29.53635760360908 42.87114436138251 18 20.61328774170353 20.53946907935124 39.62656553892405 19.22067764002119 19 32.74096725396489 20.600570277852682 26.711455088228604 19.947007379953835 20 34.33055461529194 20.527420955703064 24.81655297445224 20.32547145455276 21 19.632226244638108 30.109886537273646 29.289371068821556 20.968516149266687 22 21.550746505566043 24.43330789840563 25.53657179247394 28.479373803554388 23 16.91470502177268 33.03958860438743 24.4695478893791 25.576158484460787 24 16.865843186977315 22.03821741317223 46.89904246103006 14.196896938820394 25 13.189635553821647 24.063162766325686 43.92229533967103 18.82490634018164 26 12.364147843863966 40.493934821563464 28.08723606481508 19.054681269757488 27 15.115040456834251 39.2907479972385 30.080053088240078 15.51415845768718 28 11.080640195217851 28.89302604880829 45.799603368119904 14.226730387853962 29 11.384042547088082 23.82220029336225 44.799800345379545 19.993956814170126 30 15.665716203578867 33.59361105214543 33.46901815441869 17.27165458985701 31 33.17967194680467 25.970973584010803 24.331759427656756 16.517595041527777 32 33.84528296835168 26.162213641918292 26.94668035945481 13.045823030275214 33 30.575460458249427 28.36204802802814 24.334054308351643 16.728437205370785 34 17.493684297087604 28.658374497755794 29.164586931036922 24.683354274119672 35 19.59808989430162 24.774862641828406 34.26983589690631 21.357211566963663 36 34.91613167260467 23.41858815114849 26.217195158566692 15.448085017680144 37 18.334853691793697 36.12964546005665 29.616391567843365 15.91910928030629 38 19.103160624437038 37.123615661030826 22.89153055155545 20.88169316297669 39 19.760357083436126 34.34900928088001 27.80247961859083 18.088154017093036 40 25.288246577281065 26.15093047850175 23.688619112913866 24.87220383130332 41 15.375413795675296 23.513156359783746 27.678364821008866 33.43306502353209 42 21.57034861150156 25.254014606915625 23.519084801578877 29.656551980003936 43 22.66223372212437 26.240143965515593 24.74856713386613 26.349055178493906 44 17.805979311650535 33.119718188650666 29.220524647974866 19.853777851723933 45 14.213439203829392 45.269199067513476 20.33780643828779 20.17955529036934 46 21.734623821244092 36.834078213358886 24.667768209400215 16.76352975599681 47 22.179639435994822 27.405178398288022 26.144715176619755 24.270466989097407 48 24.10925162028139 22.791225141182974 33.42034755968124 19.679175678854396 49 21.219996825415038 22.784627359185166 35.28608556462671 20.709290250773087 50 18.63194512175298 37.545299988716835 25.285186736354543 18.537568153175638 >>END_MODULE >>Per sequence GC content fail #GC Content Count 0 1736.0 1 2323.0 2 2910.0 3 7530.5 4 12151.0 5 8914.5 6 5678.0 7 5944.0 8 6210.0 9 6456.0 10 6702.0 11 6630.5 12 6559.0 13 6182.0 14 5805.0 15 5373.0 16 4941.0 17 4624.0 18 4307.0 19 4227.0 20 4147.0 21 4116.0 22 4085.0 23 3965.5 24 3846.0 25 5048.5 26 6251.0 27 8606.0 28 10961.0 29 11888.5 30 12816.0 31 13956.0 32 15096.0 33 16831.0 34 18566.0 35 20421.0 36 22276.0 37 23500.0 38 24724.0 39 36800.0 40 48876.0 41 77195.5 42 105515.0 43 125481.0 44 145447.0 45 140136.5 46 134826.0 47 116687.5 48 98549.0 49 90480.5 50 82412.0 51 78898.0 52 75384.0 53 65384.5 54 55385.0 55 46146.0 56 36907.0 57 31325.5 58 25744.0 59 23025.5 60 20307.0 61 16784.0 62 13261.0 63 11112.5 64 8964.0 65 6902.5 66 4841.0 67 4177.5 68 3514.0 69 2896.5 70 2279.0 71 1924.5 72 1570.0 73 1293.5 74 1017.0 75 841.5 76 666.0 77 459.0 78 252.0 79 196.5 80 141.0 81 117.5 82 94.0 83 59.5 84 25.0 85 28.5 86 32.0 87 19.0 88 6.0 89 9.5 90 13.0 91 10.0 92 7.0 93 4.0 94 1.0 95 0.5 96 0.0 97 1.5 98 3.0 99 2.0 100 1.0 >>END_MODULE >>Per base N content pass #Base N-Count 1 0.0 2 0.0 3 0.0 4 0.0 5 0.0 6 0.0 7 0.0 8 0.0 9 0.0 10 0.0 11 0.0 12 0.0 13 0.0 14 0.0 15 0.0 16 0.0 17 0.0 18 0.0 19 0.0 20 0.0 21 0.0 22 0.0 23 0.0 24 0.0 25 0.0 26 0.0 27 0.0 28 0.0 29 0.0 30 0.0 31 0.0 32 0.0 33 0.0 34 0.0 35 0.0 36 0.0 37 0.0 38 0.0 39 0.0 40 0.0 41 0.0 42 0.0 43 0.0 44 0.0 45 0.0 46 0.0 47 0.0 48 0.0 49 0.0 50 0.0 >>END_MODULE >>Sequence Length Distribution pass #Length Count 50 1045806.0 >>END_MODULE >>Sequence Duplication Levels fail #Total Deduplicated Percentage 16.394093646008052 #Duplication Level Percentage of deduplicated Percentage of total 1 79.60694986204379 13.050837909114138 2 7.699826104436876 2.5246334042823104 3 2.635703660550459 1.2962991790257137 4 1.2861538118784943 0.8434130414042504 5 0.7867746485093552 0.644922863298372 6 0.520551383395757 0.5120380876169448 7 0.3627927568693504 0.4163360901146693 8 0.31311701100726475 0.41066156804889853 9 0.2536181310762221 0.37420554520702176 >10 3.172005055809794 12.22829058953702 >50 1.4368683855676507 17.52993051285619 >100 1.9162171010807934 48.073188467104 >500 0.005888804858883814 0.5480667672004174 >1k 0.002944402429441907 0.8498558660675134 >5k 5.888804858883815E-4 0.6973201091225321 >10k+ 0.0 0.0 >>END_MODULE >>Overrepresented sequences warn #Sequence Count Percentage Possible Source CGTTTTTTTTTTTTTTTTTTTTTTTTTTTTTTTTTTTTTTTTTTTTTTTT 7223 0.6906634691328984 No Hit GACCAGAAAAATGGTCCTGCCAAGCGGCTACAGTGTTCTTCTTTCAGATA 3012 0.2880075272086792 No Hit AAGGAAGGAAGGAAGAAAGAAAGAAAGAAAGAAAGAAAGAAAGAAAGAAA 1881 0.1798612744619939 No Hit AAGGAAGGAAGAAAGAAAGAAAGAAAGAAAGAAAGAAAGAAAGAAAGAAA 1740 0.1663788503795159 No Hit AAAAAAAAAAAAAAAAAAAAAAAAAAAAAAAAAAAAAAAAAAAAAAAAAA 1095 0.10470393170435052 No Hit AAGGAAGGAAGGAAGGAAGAAAGAAAGAAAGAAAGAAAGAAAGAAAGAAA 1075 0.10279153112527563 No Hit >>END_MODULE >>Adapter Content pass #Position Illumina Universal Adapter Illumina Small RNA 3' Adapter Illumina Small RNA 5' Adapter Nextera Transposase Sequence SOLID Small RNA Adapter 1 0.0 0.0 0.0 0.03136336949682828 0.0 2 0.0 0.0 0.0 0.11818635578682853 0.0 3 0.0 0.0 0.0 0.15576502716565022 0.0 4 0.0 0.0 0.0 0.21361514468266582 0.0 5 0.0 0.0 0.0 0.32883727957192826 0.0 6 0.0 0.0 0.0 0.4350711317395387 0.0 7 0.0 0.0 0.0 0.497893490762149 0.0 8 0.0 0.0 0.0 0.6621687005046825 0.0 9 0.0 0.0 0.0 0.7376129033491872 0.0 10 0.0 0.0 0.0 0.8849633679669078 0.0 11 0.0 0.0 0.0 1.0445531962907078 0.0 12 0.0 0.0 0.0 1.1765088362468756 0.0 13 0.0 0.0 0.0 1.2294823322872501 0.0 14 0.0 0.0 0.0 1.2465026974410167 0.0 15 0.0 0.0 0.0 1.2799697075748275 0.0 16 0.0 0.0 0.0 1.3558920105641008 0.0 17 0.0 0.0 0.0 1.4391770557828125 0.0 18 0.0 0.0 0.0 1.5628137532200044 0.0 19 0.0 0.0 0.0 1.6112931078995532 0.0 20 0.0 0.0 0.0 1.6608242828975928 0.0 21 0.0 0.0 0.0 1.729670703744289 0.0 22 0.0 0.0 0.0 1.793831743172252 0.0 23 0.0 0.0 0.0 1.876925548333056 0.0 24 0.0 0.0 0.0 1.933915085589488 0.0 25 0.0 0.0 0.0 1.975127318068552 0.0 26 0.0 0.0 0.0 2.0172001308081997 0.0 27 0.0 0.0 0.0 2.058890463432032 0.0 28 0.0 0.0 0.0 2.1086128784879796 0.0 29 0.0 0.0 0.0 2.159387113862418 0.0 30 0.0 0.0 0.0 2.2268948543037617 0.0 31 0.0 0.0 0.0 2.299183596192793 0.0 32 0.0 0.0 0.0 2.35655561356504 0.0 33 0.0 0.0 0.0 2.406564888707848 0.0 34 0.0 0.0 0.0 2.4645106262538174 0.0 35 0.0 0.0 0.0 2.5602262752365164 0.0 36 0.0 0.0 0.0 2.6241004545776176 0.0 37 0.0 0.0 0.0 2.688070253947673 0.0 38 0.0 0.0 0.0 2.7406612698722324 0.0 >>END_MODULE >>Kmer Content warn #Sequence Count PValue Obs/Exp Max Max Obs/Exp Position TCACGCG 20 7.856154E-4 44.000004 35 CTTCGAA 20 7.856154E-4 44.000004 41 AGCGTGC 20 7.856154E-4 44.000004 26 GCCCATA 20 7.856154E-4 44.000004 11 GTACCGT 20 7.856154E-4 44.000004 27 GTCGAAT 20 7.856154E-4 44.000004 43 ATAGCCG 40 8.310963E-9 44.000004 1 ATGCTCG 20 7.856154E-4 44.000004 1 CGTCTAT 20 7.856154E-4 44.000004 41 ATTCGAC 20 7.856154E-4 44.000004 15 CGTCTAA 20 7.856154E-4 44.000004 32 ATGTCGA 20 7.856154E-4 44.000004 41 TCGATAG 65 0.0 44.000004 1 TAGCCGT 20 7.856154E-4 44.000004 44 ACCTCGC 20 7.856154E-4 44.000004 9 CGTAGAT 20 7.856154E-4 44.000004 11 TAACACG 20 7.856154E-4 44.000004 1 TCGTCAC 20 7.856154E-4 44.000004 32 CGTACAT 20 7.856154E-4 44.000004 35 TCGTACA 20 7.856154E-4 44.000004 34 >>END_MODULE