##FastQC 0.11.5 >>Basic Statistics pass #Measure Value Filename SRR1545913_1.fastq.gz File type Conventional base calls Encoding Illumina 1.5 Total Sequences 1854150 Sequences flagged as poor quality 0 Sequence length 50 %GC 45 >>END_MODULE >>Per base sequence quality pass #Base Mean Median Lower Quartile Upper Quartile 10th Percentile 90th Percentile 1 31.670151821589407 31.0 31.0 33.0 30.0 34.0 2 32.10438475851468 33.0 31.0 34.0 30.0 34.0 3 32.1527605641399 33.0 31.0 34.0 30.0 34.0 4 35.86298573470323 37.0 35.0 37.0 35.0 37.0 5 35.853212523258634 37.0 35.0 37.0 35.0 37.0 6 35.90659116036998 37.0 35.0 37.0 35.0 37.0 7 36.08677722945824 37.0 35.0 37.0 35.0 37.0 8 36.03425666747566 37.0 35.0 37.0 35.0 37.0 9 37.819100935738746 39.0 38.0 39.0 35.0 39.0 10 37.57515896772106 39.0 37.0 39.0 35.0 39.0 11 37.2968573200658 39.0 37.0 39.0 34.0 39.0 12 36.62964215408678 39.0 35.0 39.0 33.0 39.0 13 36.42982282986814 39.0 35.0 39.0 33.0 39.0 14 37.450381576463606 40.0 35.0 41.0 33.0 41.0 15 37.62480004314646 40.0 35.0 41.0 33.0 41.0 16 37.69760591106437 40.0 35.0 41.0 33.0 41.0 17 37.63114365072944 39.0 35.0 41.0 33.0 41.0 18 37.55324542243076 39.0 36.0 41.0 33.0 41.0 19 37.4608904349702 39.0 35.0 41.0 33.0 41.0 20 37.29842137906858 39.0 35.0 41.0 33.0 41.0 21 37.180944907369955 39.0 35.0 41.0 33.0 41.0 22 37.174408758730415 39.0 35.0 41.0 33.0 41.0 23 37.14934552220694 39.0 35.0 41.0 33.0 41.0 24 37.09268883315805 39.0 35.0 41.0 33.0 41.0 25 36.995976053717335 38.0 35.0 41.0 33.0 41.0 26 36.89862956071515 38.0 35.0 41.0 33.0 41.0 27 36.80270905805895 38.0 35.0 41.0 32.0 41.0 28 36.763414502602274 38.0 35.0 41.0 32.0 41.0 29 36.696746217943534 38.0 35.0 41.0 32.0 41.0 30 36.59017986678532 38.0 35.0 41.0 31.0 41.0 31 36.40529514872044 38.0 35.0 41.0 31.0 41.0 32 36.223485694253434 38.0 35.0 41.0 31.0 41.0 33 36.04449532130626 38.0 35.0 41.0 30.0 41.0 34 35.86504166329585 38.0 35.0 41.0 30.0 41.0 35 35.637694361297626 38.0 35.0 41.0 29.0 41.0 36 35.48584958067039 38.0 35.0 41.0 27.0 41.0 37 35.412523258636035 38.0 35.0 40.0 27.0 41.0 38 35.321872016827115 38.0 35.0 40.0 27.0 41.0 39 35.2585804816223 38.0 35.0 40.0 27.0 41.0 40 35.097805463419895 38.0 34.0 40.0 25.0 41.0 41 34.973183938732035 37.0 34.0 40.0 25.0 41.0 42 34.96110670657714 37.0 34.0 40.0 25.0 41.0 43 34.89086427743171 37.0 34.0 40.0 25.0 41.0 44 34.75936898309198 37.0 34.0 40.0 24.0 41.0 45 34.656442035434026 37.0 34.0 40.0 24.0 41.0 46 34.62518620392093 37.0 34.0 40.0 24.0 41.0 47 34.54668446457946 36.0 34.0 40.0 24.0 41.0 48 34.48397864250465 36.0 34.0 40.0 23.0 41.0 49 34.42056575789445 36.0 34.0 40.0 24.0 41.0 50 34.270360003235986 36.0 34.0 40.0 24.0 41.0 >>END_MODULE >>Per sequence quality scores pass #Quality Count 8 1.0 9 1.0 10 0.0 11 3.0 12 4.0 13 12.0 14 29.0 15 54.0 16 155.0 17 301.0 18 736.0 19 1406.0 20 2464.0 21 3930.0 22 6115.0 23 9007.0 24 13165.0 25 19577.0 26 26924.0 27 32740.0 28 34286.0 29 35262.0 30 38642.0 31 45453.0 32 55750.0 33 74732.0 34 140574.0 35 274502.0 36 111336.0 37 145012.0 38 245945.0 39 536032.0 >>END_MODULE >>Per base sequence content fail #Base G A T C 1 31.640590027775527 23.592319930965672 29.39228217781733 15.37480786344147 2 33.017824879324756 25.02834182779171 29.160855378475315 12.792977914408219 3 28.710298519537254 23.980961626621365 33.3885607960521 13.920179057789284 4 25.94223768303535 27.08497155030607 32.524229431275785 14.44856133538279 5 22.585443464660358 31.417846452552382 31.7741283067713 14.222581776015964 6 21.17994768492301 39.791980152630586 28.870695466925543 10.15737669552086 7 85.8440794973438 3.946929860043686 8.46733004341612 1.7416605991963974 8 86.63446862443708 3.541784645255238 8.210554701615296 1.6131920286923926 9 82.33271310303913 5.00666073402907 9.877356200954615 2.7832699619771866 10 48.223390772051886 26.562198311894935 15.460237844834559 9.754173071218618 11 39.0645848502009 21.76377315751153 26.047892565326432 13.12374942696114 12 36.378556211741234 21.639996764015855 27.58104791953186 14.400399104711054 13 21.719871639295636 35.47782002534854 27.440983739179682 15.361324596176146 14 16.803117331391743 35.73502683170186 31.16085537847531 16.301000458431087 15 15.559582558045465 23.204756896691205 44.79810155596905 16.437558989294285 16 18.080414205970392 19.806434215139014 43.11727745867378 18.99587412021681 17 18.177277998004477 19.55936682576922 31.982633551762262 30.28072162446404 18 21.5692905104765 22.255534881212416 35.83561200550117 20.339562602809913 19 27.73071218617695 23.489199902920475 28.40439015182159 20.37569775908098 20 28.507456246797723 23.358951541137447 28.773508076477093 19.360084135587734 21 22.47849418871181 26.667421729633524 31.141817005096673 19.71226707655799 22 22.93244883100073 23.815279238465063 28.72761103470593 24.524660895828276 23 19.386133807944343 28.20877491033627 29.74554378016881 22.659547501550577 24 19.08993339265971 23.23652347436831 39.991478575088315 17.682064557883667 25 18.529245206698487 25.872825823153466 35.820672545371195 19.77725642477685 26 17.91041717228919 31.25879783189062 29.73146724914381 21.099317746676373 27 17.946390529353074 30.589164846425586 31.46994579726559 19.99449882695575 28 16.20952997330313 26.772267615888683 38.331904107003204 18.68629830380498 29 16.7172019523771 24.57390178788124 37.28630369711188 21.422592562629777 30 19.30911738532481 29.001159560984817 32.92813418547583 18.761588868214545 31 26.927918453199577 25.806973545829624 28.429253296658846 18.83585470431195 32 27.778928349917752 25.15249575277081 28.80139147318178 18.267184424129653 33 25.733354906560958 26.112666181269045 27.969527815980367 20.18445109618963 34 19.53423401558666 25.922821778173287 31.134482107704336 23.40846209853572 35 20.56640509128172 25.355499824717526 32.593317692743305 21.484777391257452 36 27.33516705768142 26.206024323814148 27.277836205269264 19.180972413235175 37 19.637731575115282 30.68424884718065 30.2533236253809 19.42469595232317 38 21.19618153871046 30.919882425909446 27.56195561308416 20.32198042229593 39 20.687808429738695 30.159480085214245 28.38184612895397 20.770865356093086 40 23.670954345657037 26.001833724348085 27.684976943612977 22.6422349863819 41 18.529892403527224 24.724968314321927 30.006256236011108 26.73888304613974 42 21.425882479842514 25.389154059811776 27.039398106949275 26.14556535339643 43 21.168837472696385 26.31502305638702 28.467114311139873 24.049025159776715 44 19.6117897688968 28.391931612868433 29.745004449478195 22.251274168756574 45 18.181646576598443 34.18040611601003 26.43135668635224 21.20659062103929 46 20.96745139282151 31.111668419491412 27.651268775449665 20.269611412237413 47 20.543968934552222 27.83749966291832 29.172936385945043 22.44559501658442 48 21.383329288353153 26.015316991613407 32.12064827549012 20.48070544454332 49 20.829274869886472 26.016125987649325 32.23665830704096 20.91794083542324 50 19.724024485613352 31.204595097484024 28.9762424830785 20.095137933824127 >>END_MODULE >>Per sequence GC content fail #GC Content Count 0 2094.0 1 3664.5 2 5235.0 3 16006.5 4 26778.0 5 18844.5 6 10911.0 7 10838.5 8 10766.0 9 11169.0 10 11572.0 11 10942.5 12 10313.0 13 9790.0 14 9267.0 15 8693.0 16 8119.0 17 8116.0 18 8113.0 19 7730.5 20 7348.0 21 7910.0 22 8472.0 23 8630.5 24 8789.0 25 11219.5 26 13650.0 27 17165.0 28 20680.0 29 24215.5 30 27751.0 31 32971.0 32 38191.0 33 42836.5 34 47482.0 35 52688.5 36 57895.0 37 64416.5 38 70938.0 39 82202.5 40 93467.0 41 116158.5 42 138850.0 43 153258.0 44 167666.0 45 173297.5 46 178929.0 47 169781.0 48 160633.0 49 152629.5 50 144626.0 51 136290.5 52 127955.0 53 116595.5 54 105236.0 55 95104.0 56 84972.0 57 76424.0 58 67876.0 59 61944.0 60 56012.0 61 48917.0 62 41822.0 63 35258.5 64 28695.0 65 23324.5 66 17954.0 67 14965.5 68 11977.0 69 10194.0 70 8411.0 71 7113.0 72 5815.0 73 4852.5 74 3890.0 75 3046.5 76 2203.0 77 1772.0 78 1341.0 79 1050.5 80 760.0 81 567.5 82 375.0 83 279.5 84 184.0 85 130.0 86 76.0 87 53.5 88 31.0 89 23.5 90 16.0 91 13.5 92 11.0 93 6.5 94 2.0 95 1.5 96 1.0 97 0.5 98 0.0 99 0.0 100 0.0 >>END_MODULE >>Per base N content pass #Base N-Count 1 0.0 2 0.0 3 0.0 4 0.0 5 0.0 6 0.0 7 0.0 8 0.0 9 0.0 10 0.0 11 0.0 12 0.0 13 0.0 14 0.0 15 0.0 16 0.0 17 0.0 18 0.0 19 0.0 20 0.0 21 0.0 22 0.0 23 0.0 24 0.0 25 0.0 26 0.0 27 0.0 28 0.0 29 0.0 30 0.0 31 0.0 32 0.0 33 0.0 34 0.0 35 0.0 36 0.0 37 0.0 38 0.0 39 0.0 40 0.0 41 0.0 42 0.0 43 0.0 44 0.0 45 0.0 46 0.0 47 0.0 48 0.0 49 0.0 50 0.0 >>END_MODULE >>Sequence Length Distribution pass #Length Count 50 1854150.0 >>END_MODULE >>Sequence Duplication Levels fail #Total Deduplicated Percentage 17.390902610158307 #Duplication Level Percentage of deduplicated Percentage of total 1 77.6152950412877 13.498000371217373 2 6.507756642487232 2.263515239602125 3 2.4006427886312847 1.2524803481659657 4 1.3873450540297423 0.9650873088526425 5 0.978122796902447 0.8505219150853054 6 0.7487622645788361 0.7812990972871275 7 0.6030425993948528 0.7341218581096817 8 0.5122361950719456 0.7126599825515407 9 0.4395447032827919 0.6879671214841766 >10 5.68291570233284 22.9294475131941 >50 1.899426827157264 23.895914609878353 >100 1.221461584629887 30.034415732677417 >500 0.001880618298102859 0.21945490928025468 >1k 0.0012537455320685725 0.36237859833460834 >5k 0.0 0.0 >10k+ 3.134363830171431E-4 0.8127353942793337 >>END_MODULE >>Overrepresented sequences warn #Sequence Count Percentage Possible Source CGTTTTTTTTTTTTTTTTTTTTTTTTTTTTTTTTTTTTTTTTTTTTTTTT 14910 0.8041420597039075 No Hit GACCAGAAAAATGGTCCTGCCAAGCGGCTACAGTGTTCTTCTTTCAGATA 3217 0.1735026831701858 No Hit >>END_MODULE >>Adapter Content pass #Position Illumina Universal Adapter Illumina Small RNA 3' Adapter Illumina Small RNA 5' Adapter Nextera Transposase Sequence SOLID Small RNA Adapter 1 0.0 0.0 0.0 0.012188873607852655 0.0 2 0.0 0.0 0.0 0.04837796294798156 0.0 3 0.0 0.0 0.0 0.0755602297548742 0.0 4 0.0 0.0 0.0 0.12409999191003965 0.0 5 0.0 0.0 0.0 0.23762910228406547 0.0 6 0.0 0.0 0.0 0.3664212712024378 0.0 7 0.0 0.0 0.0 0.45039505973087396 0.0 8 0.0 0.0 0.0 0.6613272928295985 0.0 9 0.0 0.0 0.0 0.7586764824852358 0.0 10 0.0 0.0 0.0 0.9121699970336812 0.0 11 0.0 0.0 0.0 1.0345980638028207 0.0 12 0.0 0.0 0.0 1.1486125717983982 0.0 13 0.0 0.0 0.0 1.1896556373540437 0.0 14 0.0 0.0 0.0 1.2056737588652482 0.0 15 0.0 0.0 0.0 1.2270851872825823 0.0 16 0.0 0.0 0.0 1.278968799719548 0.0 17 0.0 0.0 0.0 1.3385109079632176 0.0 18 0.0 0.0 0.0 1.4339724402017098 0.0 19 0.0 0.0 0.0 1.4763638324838875 0.0 20 0.0 0.0 0.0 1.5278159803683629 0.0 21 5.393306906129493E-5 0.0 0.0 1.5942075883828168 0.0 22 5.393306906129493E-5 0.0 0.0 1.6603834641210258 0.0 23 5.393306906129493E-5 0.0 0.0 1.7379931505002293 0.0 24 5.393306906129493E-5 0.0 0.0 1.8001779791279022 0.0 25 5.393306906129493E-5 0.0 0.0 1.8527627214626647 0.0 26 5.393306906129493E-5 0.0 0.0 1.904754200037753 0.0 27 5.393306906129493E-5 0.0 0.0 1.9587412021681094 0.0 28 5.393306906129493E-5 0.0 0.0 2.0125124720222205 0.0 29 5.393306906129493E-5 0.0 0.0 2.0849985168406007 0.0 30 1.0786613812258986E-4 0.0 0.0 2.1798667853194185 0.0 31 1.0786613812258986E-4 0.0 0.0 2.2563438772483346 0.0 32 1.0786613812258986E-4 0.0 0.0 2.3270501307876925 0.0 33 1.0786613812258986E-4 0.0 0.0 2.4020710298519536 0.0 34 1.0786613812258986E-4 0.0 0.0 2.485990885311329 0.0 35 1.0786613812258986E-4 0.0 0.0 2.5897581101852603 0.0 36 1.0786613812258986E-4 0.0 0.0 2.6694172531887927 0.0 37 1.0786613812258986E-4 0.0 0.0 2.7580832187255617 0.0 38 1.0786613812258986E-4 0.0 0.0 2.859477388560796 0.0 >>END_MODULE >>Kmer Content warn #Sequence Count PValue Obs/Exp Max Max Obs/Exp Position CGCATTA 25 4.4439E-5 44.0 15 CGTTACG 25 4.4439E-5 44.0 23 ATCCGGT 20 7.8577327E-4 44.0 12 CTAACGC 25 4.4439E-5 44.0 32 CTTACGT 30 2.5285608E-6 44.0 11 CGTTTTT 8065 0.0 41.544945 1 CGTTAGG 265 0.0 41.509434 2 CGGGATA 320 0.0 39.875 6 TCGATAG 105 0.0 39.809525 1 ACCGAAC 50 1.3496901E-9 39.6 11 TCACGAC 220 0.0 39.0 25 ACGTTAG 85 0.0 38.823532 1 CGGTCTA 230 0.0 38.26087 31 CGACAGG 150 0.0 38.13333 2 ACGGGAT 670 0.0 37.761196 5 TAGCATA 985 0.0 37.746193 30 ACTACGG 70 0.0 37.714287 2 AACTATC 35 7.292625E-6 37.714287 12 CATATGC 985 0.0 37.522846 33 CGCGACC 470 0.0 37.44681 10 >>END_MODULE