##FastQC 0.11.5 >>Basic Statistics pass #Measure Value Filename SRR1545908_1.fastq.gz File type Conventional base calls Encoding Illumina 1.5 Total Sequences 1745443 Sequences flagged as poor quality 0 Sequence length 50 %GC 43 >>END_MODULE >>Per base sequence quality pass #Base Mean Median Lower Quartile Upper Quartile 10th Percentile 90th Percentile 1 31.793868949028987 31.0 31.0 33.0 30.0 34.0 2 32.21955285850068 33.0 31.0 34.0 31.0 34.0 3 32.28342718725275 34.0 31.0 34.0 30.0 34.0 4 35.93445503519737 37.0 35.0 37.0 35.0 37.0 5 35.911843010628246 37.0 35.0 37.0 35.0 37.0 6 35.96372668715048 37.0 35.0 37.0 35.0 37.0 7 36.20198769023108 37.0 35.0 37.0 35.0 37.0 8 36.18309449234378 37.0 36.0 37.0 35.0 37.0 9 38.01591687611684 39.0 39.0 39.0 35.0 39.0 10 37.72450604230559 39.0 38.0 39.0 35.0 39.0 11 37.34453488312136 39.0 37.0 39.0 35.0 39.0 12 36.3218420767679 37.0 35.0 39.0 33.0 39.0 13 35.99192640492986 37.0 35.0 39.0 33.0 39.0 14 36.9351310813358 38.0 35.0 41.0 33.0 41.0 15 37.198785064880376 38.0 35.0 41.0 33.0 41.0 16 37.32556204929064 38.0 35.0 41.0 33.0 41.0 17 37.29564872642647 38.0 35.0 41.0 34.0 41.0 18 37.25792821650435 38.0 35.0 41.0 33.0 41.0 19 37.1884873925989 38.0 35.0 41.0 34.0 41.0 20 37.035876278973305 38.0 35.0 41.0 34.0 41.0 21 36.8878914980323 38.0 35.0 41.0 33.0 41.0 22 36.841239158196515 38.0 35.0 41.0 33.0 41.0 23 36.85953021668425 38.0 35.0 41.0 33.0 41.0 24 36.84908816844778 38.0 35.0 41.0 33.0 41.0 25 36.754149519634844 37.0 35.0 41.0 33.0 41.0 26 36.667669468438675 37.0 35.0 41.0 33.0 41.0 27 36.58735633303408 37.0 35.0 41.0 33.0 41.0 28 36.63421091379094 37.0 35.0 41.0 33.0 41.0 29 36.66533023421561 37.0 35.0 41.0 33.0 41.0 30 36.5977216099294 37.0 35.0 41.0 32.0 41.0 31 36.394621881092654 37.0 35.0 40.0 32.0 41.0 32 36.1931778923746 37.0 35.0 40.0 31.0 41.0 33 36.04834531978415 37.0 35.0 40.0 31.0 41.0 34 35.94882731776403 37.0 35.0 40.0 31.0 41.0 35 35.75259976980056 37.0 35.0 40.0 30.0 41.0 36 35.60479889632603 37.0 35.0 40.0 30.0 41.0 37 35.516971909137105 37.0 35.0 40.0 30.0 41.0 38 35.485002947675746 36.0 35.0 40.0 30.0 41.0 39 35.48238069074728 36.0 35.0 40.0 30.0 41.0 40 35.33576003341272 36.0 35.0 40.0 29.0 41.0 41 35.289260663338766 36.0 35.0 40.0 29.0 41.0 42 35.28236270104495 36.0 35.0 40.0 29.0 41.0 43 35.232401745574045 36.0 35.0 40.0 29.0 41.0 44 35.125773800691285 36.0 34.0 40.0 29.0 41.0 45 34.99687357306999 35.0 34.0 40.0 28.0 41.0 46 34.98621381506013 35.0 34.0 40.0 28.0 41.0 47 34.952444737525084 35.0 34.0 40.0 28.0 41.0 48 34.927068944674794 35.0 34.0 40.0 28.0 41.0 49 34.92378611046021 36.0 34.0 40.0 28.0 41.0 50 34.69464428228249 35.0 34.0 40.0 27.0 41.0 >>END_MODULE >>Per sequence quality scores pass #Quality Count 12 1.0 13 6.0 14 7.0 15 20.0 16 67.0 17 151.0 18 380.0 19 813.0 20 1597.0 21 2784.0 22 4243.0 23 6444.0 24 9881.0 25 14839.0 26 21367.0 27 26092.0 28 27356.0 29 28837.0 30 33771.0 31 40700.0 32 52250.0 33 72802.0 34 155104.0 35 363994.0 36 87627.0 37 109505.0 38 193241.0 39 491564.0 >>END_MODULE >>Per base sequence content fail #Base G A T C 1 31.415463008531358 24.101789631629334 31.3599470163162 13.122800343523105 2 29.647258604262642 25.8473063858287 31.956815547686173 12.548619462222485 3 27.747626247319445 24.64085048895896 34.34910220499896 13.262421058722628 4 23.87537146730085 27.84519460102679 33.87781783764924 14.401616094023122 5 23.08892355694228 31.683704366169508 31.777949781230326 13.449422295657893 6 19.861490750485693 41.27433551253177 28.234436759034814 10.629736977947719 7 89.4027476119243 3.6940192260646723 5.852955381527784 1.0502777804832355 8 91.89260262294442 2.018284183442255 5.143393396404237 0.9457197972090752 9 88.30359971651896 4.223053975409108 6.194702433708806 1.2786438743631274 10 56.26743468563568 27.942190034277832 9.902357166633342 5.888018113453146 11 48.11867245163548 18.40180401193279 24.143269072665223 9.336254463766505 12 44.06778107334356 21.514652727130017 23.22510674940402 11.192459450122405 13 19.109933695915593 45.832433370783235 23.69822446221389 11.359408471087283 14 13.065680174030318 47.769362849431346 27.713251019941644 11.451705956596692 15 11.946021726289544 23.422993475008923 53.621630726411574 11.009354072289957 16 14.237818135567876 19.292695321474262 49.94010116629417 16.52938537666369 17 14.83806689763 17.896087125159628 30.150397348982466 37.1154486282279 18 20.47130728416797 21.59749702511053 38.04174642196852 19.889449268752976 19 28.881034786011345 23.453243675101394 28.05791996644978 19.607801572437484 20 31.611459096630483 23.428092467069963 26.731952862396536 18.228495573903015 21 21.71265403682618 29.717785112432775 29.433616566109578 19.135944284631464 22 22.10676601871273 23.713292270214495 27.501098574974947 26.67884313609783 23 16.409243956978255 32.55242365405229 27.74401684844478 23.294315540524668 24 17.267306924373926 22.84566153119867 44.64958179671293 15.237449747714477 25 13.756049323867922 25.004769562798675 42.133658904931295 19.105522208402107 26 14.70171182903137 37.441841412180175 29.36022545565796 18.496221303130493 27 15.673843259275724 36.801488218177276 31.21963879656912 16.305029725977874 28 12.640401319321226 27.913257551234842 43.54269947514757 15.90364165429636 29 12.929726149751094 24.31749418342507 41.89165730419154 20.861122362632294 30 16.62328703945073 32.907920797184445 32.97489519852553 17.493896964839298 31 29.382683937544797 26.535269269749858 26.482503295724925 17.59954349698042 32 29.8213118388856 26.736478934001283 29.109572756028122 14.332636471084992 33 28.09051914041306 28.106274452961227 27.120278347674486 16.682928058951223 34 18.3551109947446 27.50665590340103 29.863650660605934 24.27458244124844 35 18.4417938597823 25.65812805115951 34.36680544709853 21.533272641959663 36 31.681813728663727 23.29918536440319 27.96017973660555 17.058821170327533 37 18.813332775690757 33.39960113277833 30.489279798882002 17.297786292648915 38 19.305757907877826 34.14966859416205 25.954843555475605 20.589729942484517 39 18.73799373568773 33.219131189044845 29.80332213655788 18.23955293870954 40 23.946871940246687 26.387513084070918 26.473221984332916 23.192392991349475 41 15.879693579223153 24.483755699842387 29.830707734368865 29.80584298656559 42 21.43811055416877 24.97268601724605 26.769536444329606 26.819666984255576 43 21.904410513548708 26.29882499743618 27.175278711478978 24.621485777536133 44 18.627706547850604 30.933808780922668 30.40821155431601 20.03027311691072 45 15.398268519796979 40.667555457267866 24.11296158052712 19.82121444240803 46 20.588068473161254 34.58589022958641 27.10400740671566 17.72203389053667 47 20.526422232063723 27.937778546764346 27.47990051809197 24.055898703079965 48 22.257730558946925 24.373525804050892 33.288339980165496 20.080403656836687 49 21.371479905101456 23.203106603882222 35.33057223868095 20.094841252335367 50 19.21643960874116 35.47638049480848 26.35989831807742 18.94728157837294 >>END_MODULE >>Per sequence GC content fail #GC Content Count 0 1931.0 1 2434.5 2 2938.0 3 7915.5 4 12893.0 5 9884.0 6 6875.0 7 7224.5 8 7574.0 9 8048.5 10 8523.0 11 8373.0 12 8223.0 13 7661.0 14 7099.0 15 6736.0 16 6373.0 17 5699.5 18 5026.0 19 5093.5 20 5161.0 21 5809.0 22 6457.0 23 9032.5 24 11608.0 25 12317.5 26 13027.0 27 16947.5 28 20868.0 29 24543.0 30 28218.0 31 31620.5 32 35023.0 33 42148.0 34 49273.0 35 52856.0 36 56439.0 37 63370.5 38 70302.0 39 89235.0 40 108168.0 41 142128.0 42 176088.0 43 199222.5 44 222357.0 45 224809.0 46 227261.0 47 199016.0 48 170771.0 49 153315.0 50 135859.0 51 126062.5 52 116266.0 53 100870.5 54 85475.0 55 71054.0 56 56633.0 57 45690.0 58 34747.0 59 28761.5 60 22776.0 61 17205.0 62 11634.0 63 9321.0 64 7008.0 65 5349.0 66 3690.0 67 2534.0 68 1378.0 69 1017.5 70 657.0 71 544.0 72 431.0 73 318.0 74 205.0 75 149.0 76 93.0 77 70.0 78 47.0 79 33.5 80 20.0 81 18.5 82 17.0 83 11.5 84 6.0 85 7.5 86 9.0 87 7.0 88 5.0 89 4.0 90 3.0 91 4.0 92 5.0 93 4.0 94 3.0 95 1.5 96 0.0 97 0.0 98 0.0 99 0.0 100 0.0 >>END_MODULE >>Per base N content pass #Base N-Count 1 0.0 2 0.0 3 0.0 4 0.0 5 0.0 6 0.0 7 0.0 8 0.0 9 0.0 10 0.0 11 0.0 12 0.0 13 0.0 14 0.0 15 0.0 16 0.0 17 0.0 18 0.0 19 0.0 20 0.0 21 0.0 22 0.0 23 0.0 24 0.0 25 0.0 26 0.0 27 0.0 28 0.0 29 0.0 30 0.0 31 0.0 32 0.0 33 0.0 34 0.0 35 0.0 36 0.0 37 0.0 38 0.0 39 0.0 40 0.0 41 0.0 42 0.0 43 0.0 44 0.0 45 0.0 46 0.0 47 0.0 48 0.0 49 0.0 50 0.0 >>END_MODULE >>Sequence Length Distribution pass #Length Count 50 1745443.0 >>END_MODULE >>Sequence Duplication Levels fail #Total Deduplicated Percentage 12.637599246405596 #Duplication Level Percentage of deduplicated Percentage of total 1 79.96574457525536 10.105750333825094 2 7.329853182779909 1.8526349411792604 3 2.2471313262888475 0.8519503546704703 4 1.0919820693740179 0.5520012710803804 5 0.6802443947347179 0.42983280251355505 6 0.4579327205544408 0.3472302122509959 7 0.360019204789437 0.3184844901796971 8 0.2883278033127885 0.2915016983890782 9 0.22553278633287496 0.25651736735400854 >10 3.2284909729512155 10.087700733232072 >50 1.4894388243917718 13.702421287715216 >100 2.6155775105162213 58.97032389782319 >500 0.01788977953527405 1.3729667291841594 >1k 9.174245915525153E-4 0.15379499799550647 >5k 9.174245915525153E-4 0.7068888826073146 >10k+ 0.0 0.0 >>END_MODULE >>Overrepresented sequences warn #Sequence Count Percentage Possible Source CGTTTTTTTTTTTTTTTTTTTTTTTTTTTTTTTTTTTTTTTTTTTTTTTT 6872 0.3937109375671391 No Hit GACCAGAAAAATGGTCCTGCCAAGCGGCTACAGTGTTCTTCTTTCAGATA 5322 0.30490826684114003 No Hit >>END_MODULE >>Adapter Content pass #Position Illumina Universal Adapter Illumina Small RNA 3' Adapter Illumina Small RNA 5' Adapter Nextera Transposase Sequence SOLID Small RNA Adapter 1 0.0 0.0 0.0 0.04084922853395957 0.0 2 0.0 0.0 0.0 0.1300529435793664 0.0 3 0.0 0.0 0.0 0.17806367781703555 0.0 4 0.0 0.0 0.0 0.24985061099102063 0.0 5 0.0 0.0 0.0 0.39886722167381006 0.0 6 0.0 0.0 0.0 0.5303524663939183 0.0 7 0.0 0.0 0.0 0.6215614030363639 0.0 8 0.0 0.0 0.0 0.8706672174341986 0.0 9 0.0 0.0 0.0 0.9658865972707216 0.0 10 0.0 0.0 0.0 1.1428044341751635 0.0 11 0.0 0.0 0.0 1.2883835221201723 0.0 12 0.0 0.0 0.0 1.4266292282245825 0.0 13 0.0 0.0 0.0 1.4775618567893651 0.0 14 0.0 0.0 0.0 1.4925150806987109 0.0 15 0.0 0.0 0.0 1.5182392091864358 0.0 16 0.0 0.0 0.0 1.5854427787100467 0.0 17 0.0 0.0 0.0 1.672068351702118 0.0 18 0.0 0.0 0.0 1.8236058123926133 0.0 19 0.0 0.0 0.0 1.8853093455357752 0.0 20 0.0 0.0 0.0 1.9505076934623473 0.0 21 0.0 0.0 0.0 2.0276800789255223 0.0 22 0.0 0.0 0.0 2.109722288267219 0.0 23 0.0 0.0 0.0 2.216170909047159 0.0 24 0.0 0.0 0.0 2.290593276320109 0.0 25 0.0 0.0 0.0 2.349775959455565 0.0 26 0.0 0.0 0.0 2.415088891473397 0.0 27 0.0 0.0 0.0 2.471922600738036 0.0 28 0.0 0.0 0.0 2.53500114297631 0.0 29 0.0 0.0 0.0 2.603465137503774 0.0 30 0.0 0.0 0.0 2.7096272980555653 0.0 31 0.0 0.0 0.0 2.806049810850311 0.0 32 0.0 0.0 0.0 2.883394072450375 0.0 33 0.0 0.0 0.0 2.964748777244516 0.0 34 0.0 0.0 0.0 3.0465618184036947 0.0 35 0.0 0.0 0.0 3.1758126733442458 0.0 36 0.0 0.0 0.0 3.2681674508992846 0.0 37 0.0 0.0 0.0 3.3634441227814373 0.0 38 0.0 0.0 0.0 3.4580332901160338 0.0 >>END_MODULE >>Kmer Content warn #Sequence Count PValue Obs/Exp Max Max Obs/Exp Position ACGCGAG 20 7.857605E-4 44.0 1 TCGCCTA 20 7.857605E-4 44.0 15 TGTCACG 25 4.4437922E-5 44.0 32 AACCGTA 20 7.857605E-4 44.0 13 AGCGTAA 25 4.4437922E-5 44.0 12 GTCGCTG 30 2.5284753E-6 44.0 28 TCGCATA 30 2.5284753E-6 44.0 14 GTCGCGA 20 7.857605E-4 44.0 19 GTACCGT 20 7.857605E-4 44.0 11 CAAACGT 20 7.857605E-4 44.0 24 GCGACCG 20 7.857605E-4 44.0 1 CGAGTTA 20 7.857605E-4 44.0 13 GGTCGGC 20 7.857605E-4 44.0 2 CGCGGTA 20 7.857605E-4 44.0 20 CGCGGAA 30 2.5284753E-6 44.0 33 CGTGCGT 20 7.857605E-4 44.0 22 AACCCGC 25 4.4437922E-5 44.0 12 ACACCGT 20 7.857605E-4 44.0 38 CGGTTTG 20 7.857605E-4 44.0 28 TGGCGCG 25 4.4437922E-5 44.0 25 >>END_MODULE