##FastQC 0.11.5 >>Basic Statistics pass #Measure Value Filename SRR1545907_1.fastq.gz File type Conventional base calls Encoding Illumina 1.5 Total Sequences 1656604 Sequences flagged as poor quality 0 Sequence length 50 %GC 45 >>END_MODULE >>Per base sequence quality pass #Base Mean Median Lower Quartile Upper Quartile 10th Percentile 90th Percentile 1 31.75774657069523 31.0 31.0 33.0 30.0 34.0 2 32.17495973690755 33.0 31.0 34.0 30.0 34.0 3 32.2442533037467 34.0 31.0 34.0 30.0 34.0 4 35.91131435152879 37.0 35.0 37.0 35.0 37.0 5 35.88868733867599 37.0 35.0 37.0 35.0 37.0 6 35.936078266139646 37.0 35.0 37.0 35.0 37.0 7 36.13429823904808 37.0 35.0 37.0 35.0 37.0 8 36.091456377021906 37.0 35.0 37.0 35.0 37.0 9 37.91116223309856 39.0 39.0 39.0 35.0 39.0 10 37.65656547974048 39.0 37.0 39.0 35.0 39.0 11 37.3442560805117 39.0 37.0 39.0 35.0 39.0 12 36.13972500368223 37.0 35.0 39.0 33.0 39.0 13 35.78105811648408 37.0 35.0 39.0 32.0 39.0 14 36.662674966377 38.0 35.0 41.0 33.0 41.0 15 36.95461256884566 38.0 35.0 41.0 33.0 41.0 16 37.091917561469124 38.0 35.0 41.0 33.0 41.0 17 37.04546831952597 38.0 35.0 41.0 33.0 41.0 18 37.01807070368054 38.0 35.0 41.0 33.0 41.0 19 36.94361356123733 37.0 35.0 41.0 33.0 41.0 20 36.74016240453361 36.0 35.0 41.0 33.0 41.0 21 36.585204430268185 36.0 35.0 41.0 33.0 41.0 22 36.568700787876885 36.0 35.0 41.0 33.0 41.0 23 36.57913659510662 36.0 35.0 41.0 33.0 41.0 24 36.5338880022021 36.0 35.0 41.0 33.0 41.0 25 36.42449674152664 36.0 35.0 40.0 33.0 41.0 26 36.30213497009545 35.0 35.0 40.0 32.0 41.0 27 36.211896747804545 36.0 35.0 40.0 32.0 41.0 28 36.2514608198459 36.0 35.0 40.0 32.0 41.0 29 36.256159589135365 36.0 35.0 40.0 32.0 41.0 30 36.1893620925701 36.0 35.0 40.0 32.0 41.0 31 35.962051280813036 36.0 35.0 40.0 31.0 41.0 32 35.74599481831506 35.0 35.0 40.0 31.0 41.0 33 35.58937199234096 35.0 35.0 40.0 30.0 41.0 34 35.45498743212017 35.0 35.0 40.0 30.0 41.0 35 35.265056102725815 35.0 35.0 40.0 30.0 41.0 36 35.09963334629157 35.0 35.0 40.0 29.0 41.0 37 35.0215615801966 35.0 34.0 40.0 29.0 41.0 38 34.979316119000075 35.0 34.0 40.0 29.0 41.0 39 34.96297183877378 35.0 34.0 40.0 29.0 41.0 40 34.77924174998974 35.0 34.0 40.0 27.0 41.0 41 34.74116747273337 35.0 34.0 40.0 27.0 41.0 42 34.71704764687276 35.0 34.0 40.0 27.0 41.0 43 34.64436823767177 35.0 34.0 40.0 27.0 41.0 44 34.51199985029615 35.0 34.0 40.0 27.0 41.0 45 34.395579752312564 35.0 34.0 40.0 27.0 41.0 46 34.40651899910902 35.0 34.0 40.0 27.0 41.0 47 34.35152999751298 35.0 34.0 40.0 27.0 41.0 48 34.311702132796974 35.0 34.0 40.0 26.0 41.0 49 34.29003189657878 35.0 34.0 39.0 26.0 41.0 50 34.043712317488065 35.0 34.0 39.0 24.0 41.0 >>END_MODULE >>Per sequence quality scores pass #Quality Count 10 2.0 11 3.0 12 3.0 13 13.0 14 23.0 15 46.0 16 115.0 17 233.0 18 533.0 19 1087.0 20 2027.0 21 3355.0 22 5118.0 23 7331.0 24 10719.0 25 15535.0 26 21961.0 27 27547.0 28 29640.0 29 31095.0 30 35295.0 31 42201.0 32 53405.0 33 73122.0 34 158107.0 35 380584.0 36 85405.0 37 104994.0 38 178565.0 39 388540.0 >>END_MODULE >>Per base sequence content fail #Base G A T C 1 32.87182694234711 22.66045476166905 30.79740239671038 13.670315899273453 2 31.00572013589246 25.10159338019225 31.27126337978177 12.621423104133516 3 29.01689238949079 24.377400996254988 33.3476799524811 13.25802666177312 4 25.860253868758015 26.535490678520635 32.42778600075818 15.176469451963174 5 22.784564084114248 32.10882021291751 31.070189375372752 14.03642632759549 6 20.129312738590514 40.26321317587064 28.92779445178208 10.67967963375677 7 87.11285255860786 4.369964095221309 6.926881741200673 1.590301604970168 8 89.07898326938725 2.80145405902678 6.526303208250131 1.5932594633358363 9 85.303367612296 3.9270097138483306 8.138637839821708 2.6309848340339634 10 59.87200320655993 17.47605342012937 12.833302346245693 9.818641027065008 11 53.70957694174348 17.304678728289925 17.849105760942265 11.136638569024342 12 45.591221559286346 20.443147547633593 22.277985565651175 11.687645327428884 13 18.8848391045778 46.5856656147154 22.84076339306195 11.688731887644845 14 12.823342210932728 46.209595051080406 29.437391193067263 11.529671544919607 15 11.538303662190843 19.807751279122833 56.302411439305956 12.35153361938037 16 13.14683533300656 14.615683651614992 53.126818479250325 19.110662536128128 17 14.522299837498883 14.66850255100193 29.74675903233362 41.06243857916557 18 21.36479206859334 19.931679508198698 38.165669043416536 20.537859379791428 19 31.34557202566214 21.63516446899802 26.06724358989837 20.95201991544147 20 32.84061851836649 20.87300284195861 25.80230399057349 20.484074649101412 21 21.196194141750233 28.41964645745151 29.44191852730043 20.94224087349783 22 22.46964271485521 23.1439740577712 25.392248237961518 28.994134989412075 23 17.44490536060519 30.00753348416399 25.832546583251037 26.715014571979783 24 18.680505419520898 21.130879799879754 43.39154076653202 16.797074014067334 25 15.40742386231109 22.854526489130773 41.31965152806585 20.418398120492284 26 14.759592515773232 35.71782997022825 29.233419694749017 20.2891578192495 27 15.94201148856335 35.76346549929856 30.43612112490372 17.858401887234365 28 13.169472004172391 27.479349319451117 42.92691554529628 16.42426313108021 29 13.690477627725153 23.35349908608213 41.24540324664193 21.710620039550793 30 17.950940598960283 30.92145135469913 32.83397842815784 18.29362961818274 31 32.68741352791615 25.11306262691627 24.6060615572581 17.59346228790948 32 33.32619020598767 24.508029679995943 26.968122737841995 15.197657376174389 33 30.134962851713503 26.14626066338123 24.43263447389962 19.286142011005648 34 18.770267366250472 27.294392624912167 28.508321843965124 25.427018164872234 35 20.2825780934973 25.03706377625552 33.21928475362851 21.46107337661867 36 33.04706495939887 23.43118814152326 26.097546547032362 17.42420035204551 37 19.62593353631888 34.01712177442527 29.344611023515576 17.01233366574027 38 20.180501797653513 34.75682782366818 23.07201962569208 21.99065075298623 39 20.705672568700788 32.4027951157911 27.0929564337645 19.798575881743616 40 24.65857863436283 24.286311031483688 25.408788099026687 25.6463222351268 41 16.401445366545055 23.159306629707523 27.927676137447456 32.511571866299974 42 22.831406902313407 23.425634611530576 24.622118502671732 29.120839983484288 43 22.63938756637072 24.716588877003797 26.787572648623325 25.856450908002156 44 18.883873273274723 30.779111966408383 29.715007328245015 20.622007432071875 45 16.161074100992153 40.52760949508754 22.99300255220922 20.31831385171109 46 22.6100504405398 32.8106173835147 26.262824428771147 18.31650774717434 47 21.494636014400545 26.944399506460204 27.08661816583806 24.474346313301186 48 23.100451284676364 23.425815704899904 33.18185879063434 20.2918742197894 49 21.33491166265444 23.557229126574608 34.239383703045505 20.868475507725442 50 19.94206219470676 34.869045348194255 26.152357473481896 19.036534983617088 >>END_MODULE >>Per sequence GC content fail #GC Content Count 0 1687.0 1 2667.0 2 3647.0 3 10153.0 4 16659.0 5 12093.5 6 7528.0 7 8045.5 8 8563.0 9 8574.0 10 8585.0 11 8253.5 12 7922.0 13 7257.0 14 6592.0 15 6072.0 16 5552.0 17 5569.5 18 5587.0 19 5090.5 20 4594.0 21 4356.0 22 4118.0 23 4466.0 24 4814.0 25 5889.5 26 6965.0 27 8810.5 28 10656.0 29 13301.0 30 15946.0 31 19658.0 32 23370.0 33 27019.0 34 30668.0 35 34130.5 36 37593.0 37 40660.0 38 43727.0 39 57601.5 40 71476.0 41 110283.5 42 149091.0 43 176542.0 44 203993.0 45 205885.5 46 207778.0 47 184263.0 48 160748.0 49 148979.5 50 137211.0 51 129910.0 52 122609.0 53 108903.0 54 95197.0 55 82956.5 56 70716.0 57 65407.0 58 60098.0 59 51111.5 60 42125.0 61 36401.5 62 30678.0 63 25041.0 64 19404.0 65 15885.0 66 12366.0 67 9491.5 68 6617.0 69 5588.0 70 4559.0 71 3694.0 72 2829.0 73 2449.5 74 2070.0 75 1573.5 76 1077.0 77 804.5 78 532.0 79 444.0 80 356.0 81 242.0 82 128.0 83 113.0 84 98.0 85 70.5 86 43.0 87 29.0 88 15.0 89 10.5 90 6.0 91 5.5 92 5.0 93 4.5 94 4.0 95 3.0 96 2.0 97 1.0 98 0.0 99 0.0 100 0.0 >>END_MODULE >>Per base N content pass #Base N-Count 1 0.0 2 0.0 3 0.0 4 0.0 5 0.0 6 0.0 7 0.0 8 0.0 9 0.0 10 0.0 11 0.0 12 0.0 13 0.0 14 0.0 15 0.0 16 0.0 17 0.0 18 0.0 19 0.0 20 0.0 21 0.0 22 0.0 23 0.0 24 0.0 25 0.0 26 0.0 27 0.0 28 0.0 29 0.0 30 0.0 31 0.0 32 0.0 33 0.0 34 0.0 35 0.0 36 0.0 37 0.0 38 0.0 39 0.0 40 0.0 41 0.0 42 0.0 43 0.0 44 0.0 45 0.0 46 0.0 47 0.0 48 0.0 49 0.0 50 0.0 >>END_MODULE >>Sequence Length Distribution pass #Length Count 50 1656604.0 >>END_MODULE >>Sequence Duplication Levels fail #Total Deduplicated Percentage 13.756845584923532 #Duplication Level Percentage of deduplicated Percentage of total 1 80.05437107366977 11.012956212586442 2 7.171069804979224 1.9730259997161381 3 2.3145340051538543 0.9552206072986853 4 1.1566094645863731 0.6364519122550326 5 0.7602689992718555 0.5229451612993629 6 0.5029989057198674 0.41518069652242356 7 0.40014091355837134 0.3853273732022925 8 0.34392232829048025 0.3785029090799612 9 0.28679828283009823 0.35508957218233983 >10 3.568065351219335 11.6869049378655 >50 1.161711454048493 11.61217513439874 >100 2.2573308856675247 57.262106523613944 >500 0.019960677904310987 1.6732047388120082 >1k 0.001330711860287399 0.20344509843906763 >5k 8.871412401915994E-4 0.9274631227280712 >10k+ 0.0 0.0 >>END_MODULE >>Overrepresented sequences warn #Sequence Count Percentage Possible Source CGTTTTTTTTTTTTTTTTTTTTTTTTTTTTTTTTTTTTTTTTTTTTTTTT 8952 0.5403826140707133 No Hit GACCAGAAAAATGGTCCTGCCAAGCGGCTACAGTGTTCTTCTTTCAGATA 6247 0.37709675939452036 No Hit >>END_MODULE >>Adapter Content pass #Position Illumina Universal Adapter Illumina Small RNA 3' Adapter Illumina Small RNA 5' Adapter Nextera Transposase Sequence SOLID Small RNA Adapter 1 0.0 0.0 0.0 0.024689062684866148 0.0 2 0.0 0.0 0.0 0.08897720879582567 0.0 3 0.0 0.0 0.0 0.12628244287711488 0.0 4 0.0 0.0 0.0 0.18960475768499896 0.0 5 0.0 0.0 0.0 0.3251229623977728 0.0 6 0.0 0.0 0.0 0.46305574536823524 0.0 7 0.0 0.0 0.0 0.5564395594843426 0.0 8 0.0 0.0 0.0 0.8132903216459697 0.0 9 0.0 0.0 0.0 0.9132538615142786 0.0 10 0.0 0.0 0.0 1.0792561167303714 0.0 11 0.0 0.0 0.0 1.213023752206321 0.0 12 0.0 0.0 0.0 1.339366559539878 0.0 13 0.0 0.0 0.0 1.3922458233832589 0.0 14 0.0 0.0 0.0 1.4084838621662148 0.0 15 0.0 0.0 0.0 1.438786819300207 0.0 16 0.0 0.0 0.0 1.511103438117981 0.0 17 0.0 0.0 0.0 1.5930783699665099 0.0 18 0.0 0.0 0.0 1.727328921093997 0.0 19 0.0 0.0 0.0 1.7789405313520914 0.0 20 0.0 0.0 0.0 1.8386409787734426 0.0 21 0.0 0.0 0.0 1.913009989110252 0.0 22 0.0 0.0 0.0 1.9865338970568707 0.0 23 6.036445644221552E-5 0.0 0.0 2.087463268228255 0.0 24 6.036445644221552E-5 0.0 0.0 2.1520532366214256 0.0 25 6.036445644221552E-5 0.0 0.0 2.2078299943740327 0.0 26 6.036445644221552E-5 0.0 0.0 2.2649347701683684 0.0 27 6.036445644221552E-5 0.0 0.0 2.32083225683386 0.0 28 6.036445644221552E-5 0.0 0.0 2.3847582162061665 0.0 29 6.036445644221552E-5 0.0 0.0 2.448865268947799 0.0 30 6.036445644221552E-5 0.0 0.0 2.5376010199178562 0.0 31 6.036445644221552E-5 0.0 0.0 2.6234392769786865 0.0 32 6.036445644221552E-5 0.0 0.0 2.7054745732836576 0.0 33 6.036445644221552E-5 0.0 0.0 2.7771271830805673 0.0 34 6.036445644221552E-5 0.0 0.0 2.8620599732947642 0.0 35 6.036445644221552E-5 0.0 0.0 2.977114627273627 0.0 36 6.036445644221552E-5 0.0 0.0 3.0580633633626384 0.0 37 6.036445644221552E-5 0.0 0.0 3.1429961535768354 0.0 38 6.036445644221552E-5 0.0 0.0 3.221530311408158 0.0 >>END_MODULE >>Kmer Content fail #Sequence Count PValue Obs/Exp Max Max Obs/Exp Position TATCACG 30 2.5283953E-6 44.000004 1 CGAACAG 30 2.5283953E-6 44.000004 16 CGTGACA 40 8.3164196E-9 44.000004 13 CGCATCG 20 7.8574877E-4 44.000004 21 CACGCTT 30 2.5283953E-6 44.000004 13 ACCGACG 20 7.8574877E-4 44.000004 34 GCCGATT 60 0.0 44.000004 9 CCCGTCG 20 7.8574877E-4 44.000004 25 GCCCTCG 20 7.8574877E-4 44.000004 1 ACGCTTA 30 2.5283953E-6 44.000004 14 ACTCGTC 20 7.8574877E-4 44.000004 41 CGTACCG 20 7.8574877E-4 44.000004 19 CGTCGAC 30 2.5283953E-6 44.000004 11 ACGTATC 20 7.8574877E-4 44.000004 9 CCGAATT 20 7.8574877E-4 44.000004 20 CGCAATA 20 7.8574877E-4 44.000004 19 CCTATCA 30 2.5283953E-6 44.000004 10 CGCAAAC 20 7.8574877E-4 44.000004 23 TATCGTC 20 7.8574877E-4 44.000004 38 GCGTATC 20 7.8574877E-4 44.000004 23 >>END_MODULE