##FastQC 0.11.5 >>Basic Statistics pass #Measure Value Filename SRR1545903_1.fastq.gz File type Conventional base calls Encoding Illumina 1.5 Total Sequences 2266950 Sequences flagged as poor quality 0 Sequence length 50 %GC 44 >>END_MODULE >>Per base sequence quality pass #Base Mean Median Lower Quartile Upper Quartile 10th Percentile 90th Percentile 1 31.717659851342113 31.0 31.0 33.0 30.0 34.0 2 32.13630340325106 33.0 31.0 34.0 30.0 34.0 3 32.21178984979819 34.0 31.0 34.0 30.0 34.0 4 35.892257438408436 37.0 35.0 37.0 35.0 37.0 5 35.86834160435828 37.0 35.0 37.0 35.0 37.0 6 35.91738326826794 37.0 35.0 37.0 35.0 37.0 7 36.11266371115375 37.0 35.0 37.0 35.0 37.0 8 36.05281148679944 37.0 35.0 37.0 35.0 37.0 9 37.77856106222016 39.0 38.0 39.0 35.0 39.0 10 37.562428814045305 39.0 37.0 39.0 35.0 39.0 11 37.30206224221972 39.0 37.0 39.0 34.0 39.0 12 36.6146059683716 39.0 35.0 39.0 33.0 39.0 13 36.39707315997265 39.0 35.0 39.0 33.0 39.0 14 37.441324246233926 40.0 35.0 41.0 33.0 41.0 15 37.616945234786826 40.0 35.0 41.0 33.0 41.0 16 37.68578927634046 40.0 35.0 41.0 33.0 41.0 17 37.60909636295463 39.0 35.0 41.0 33.0 41.0 18 37.551348728467765 39.0 35.0 41.0 33.0 41.0 19 37.47549571009506 39.0 35.0 41.0 33.0 41.0 20 37.32301241756545 39.0 35.0 41.0 33.0 41.0 21 37.20516023732328 39.0 35.0 41.0 33.0 41.0 22 37.19766602704074 39.0 35.0 41.0 33.0 41.0 23 37.199517413264516 39.0 35.0 41.0 33.0 41.0 24 37.145390943779084 39.0 35.0 41.0 33.0 41.0 25 37.05886940603013 38.0 35.0 41.0 33.0 41.0 26 36.95382474249542 38.0 35.0 41.0 33.0 41.0 27 36.86253600652859 38.0 35.0 41.0 32.0 41.0 28 36.85760338781182 38.0 35.0 41.0 32.0 41.0 29 36.81946756655418 38.0 35.0 41.0 32.0 41.0 30 36.71298617084629 38.0 35.0 41.0 32.0 41.0 31 36.56457310483248 38.0 35.0 41.0 31.0 41.0 32 36.38247866075564 38.0 35.0 41.0 31.0 41.0 33 36.23353977811597 38.0 35.0 41.0 31.0 41.0 34 36.0813427733298 38.0 35.0 41.0 30.0 41.0 35 35.884636185182735 38.0 35.0 41.0 30.0 41.0 36 35.76396788636715 38.0 35.0 41.0 30.0 41.0 37 35.70969408235735 38.0 35.0 41.0 29.0 41.0 38 35.64394097796599 38.0 35.0 40.0 29.0 41.0 39 35.59691700302168 38.0 35.0 40.0 29.0 41.0 40 35.448671563113436 38.0 35.0 40.0 28.0 41.0 41 35.36854010895697 38.0 35.0 40.0 28.0 41.0 42 35.31727078232868 38.0 35.0 40.0 27.0 41.0 43 35.24630494717572 37.0 35.0 40.0 27.0 41.0 44 35.128399391252564 37.0 34.0 40.0 27.0 41.0 45 35.01629899203776 37.0 34.0 40.0 27.0 41.0 46 34.974350117999954 37.0 34.0 40.0 27.0 41.0 47 34.91870751450186 37.0 34.0 40.0 26.0 41.0 48 34.839444628245 36.0 34.0 40.0 26.0 41.0 49 34.78624892476676 36.0 34.0 40.0 26.0 41.0 50 34.615435717594124 36.0 34.0 40.0 26.0 41.0 >>END_MODULE >>Per sequence quality scores pass #Quality Count 10 1.0 11 1.0 12 5.0 13 14.0 14 21.0 15 55.0 16 120.0 17 325.0 18 664.0 19 1357.0 20 2569.0 21 4185.0 22 6421.0 23 9458.0 24 13891.0 25 20079.0 26 28499.0 27 35384.0 28 37618.0 29 40411.0 30 45638.0 31 54786.0 32 67535.0 33 90105.0 34 175726.0 35 358907.0 36 131822.0 37 168576.0 38 292426.0 39 680351.0 >>END_MODULE >>Per base sequence content fail #Base G A T C 1 34.942896843776886 22.23264738966453 29.37934228809634 13.44511347846225 2 31.353272017468402 25.947330113147622 29.859723416925828 12.83967445245815 3 29.67476124307991 25.35777145503871 32.10458986744304 12.86287743443834 4 27.509473080570814 26.660358631641635 31.404353867531263 14.425814420256291 5 23.535763911863956 32.33057632501819 30.085489313835772 14.048170449282074 6 21.053794746244954 42.01998279626811 27.25349037252696 9.67273208495997 7 86.40283199894131 4.58708837865855 7.492401685083482 1.517677937316659 8 87.29738194490395 4.033878118176404 6.940206003661308 1.7285339332583427 9 81.56752464765434 6.675665541807274 8.785681201614503 2.9711286089238844 10 47.861267341582305 27.323496327664927 14.2534242043274 10.561812126425373 11 41.01559363903042 21.80043671011712 24.232029819801937 12.95193983105053 12 36.680694324974084 22.789077835858755 26.887315556143715 13.642912283023445 13 21.062661284986437 37.687200864597806 26.399126579765763 14.851011270649991 14 15.785747369814068 39.79408456295904 29.519751207569644 14.900416859657248 15 15.658175081056044 23.885661351154635 45.90335031650456 14.552813251284766 16 18.0969143562937 21.37876883036679 41.95743179161428 18.566885021725227 17 17.686715631134344 21.213833564922034 29.940007499062617 31.15944330488101 18 21.68305432409184 23.871986589911558 34.823132402567325 19.621826683429276 19 28.972716645713405 23.84472529169148 27.924480028231763 19.25807803436335 20 30.066476984494585 23.989413088069874 26.85824566046891 19.085864266966627 21 22.163832462118705 28.779417278722512 29.371578552680916 19.685171706477867 22 21.605064072873244 25.32499614018836 27.71843225479168 25.351507532146716 23 19.846842674077507 29.540660358631644 27.833520809898765 22.77897615739209 24 18.87950770859525 24.808487174397317 38.91170956571605 17.400295551291382 25 17.877368270142703 26.133880323783053 36.308167361432766 19.680584044641478 26 17.073071748384393 34.01376298550917 29.05891175367785 19.854253512428592 27 18.738790004190655 32.20582721277487 30.456207679922365 18.599175103112113 28 15.763426630494717 28.091532676062553 38.54368203974503 17.601358653697698 29 17.06129380886213 25.31246829440438 37.21374534065595 20.41249255607755 30 18.218443282824943 30.85096715851695 32.13096892300227 18.799620635655838 31 28.61126182756567 26.120999580934733 26.50905401530691 18.75868457619268 32 28.387525088775668 26.746421403206956 27.86281126623878 17.0032422417786 33 26.16237676172831 27.54586559033062 26.86323033150268 19.428527316438387 34 19.025254196166657 27.796554842409403 29.639912657976573 23.538278303447363 35 20.757537660733586 25.768146628730232 32.4404596484263 21.033856062109884 36 28.015792143629103 27.12631509296632 27.173382738922342 17.684510024482233 37 20.031275502326913 34.015174573766515 28.38959835902865 17.563951564877918 38 20.106133792099516 34.07512296257085 25.995588786695777 19.823154458633844 39 20.96667328348662 32.52599307439511 27.330510156818633 19.176823485299632 40 23.63598667813582 27.93969871413132 26.61765808685679 21.806656520876068 41 18.409537043163724 26.17922759655043 28.183021239992062 27.228214120293785 42 20.9018284479146 26.600939588433796 26.490615143695273 26.006616819956328 43 21.86819294646993 26.171640309667172 27.479212157303866 24.480954586559033 44 19.522662608350426 29.94706544034937 29.964357396501907 20.565914554798297 45 18.104633979576082 36.012571957917025 25.152341251461213 20.730452811045676 46 20.645272282141203 33.89571891748825 26.664284611482387 18.794724188888154 47 21.54048391009947 27.643441628619954 28.326076887447893 22.48999757383268 48 21.284457089922583 26.097620150422372 32.10185491519442 20.51606784446062 49 20.725335803612786 25.933743576170627 33.27254681400119 20.0683738062154 50 19.84128454531419 32.46851496504114 28.586162023864663 19.10403846578001 >>END_MODULE >>Per sequence GC content fail #GC Content Count 0 2441.0 1 4876.0 2 7311.0 3 16276.5 4 25242.0 5 18048.0 6 10854.0 7 10730.0 8 10606.0 9 10553.0 10 10500.0 11 10124.0 12 9748.0 13 9443.0 14 9138.0 15 8299.0 16 7460.0 17 7318.0 18 7176.0 19 7220.0 20 7264.0 21 9436.5 22 11609.0 23 12839.5 24 14070.0 25 17394.0 26 20718.0 27 27025.5 28 33333.0 29 38668.5 30 44004.0 31 50334.0 32 56664.0 33 57878.0 34 59092.0 35 65536.5 36 71981.0 37 75743.5 38 79506.0 39 95987.5 40 112469.0 41 147466.5 42 182464.0 43 205729.5 44 228995.0 45 232371.5 46 235748.0 47 220127.0 48 204506.0 49 193572.5 50 182639.0 51 168093.0 52 153547.0 53 138014.5 54 122482.0 55 109480.0 56 96478.0 57 88340.5 58 80203.0 59 69814.0 60 59425.0 61 50162.5 62 40900.0 63 33523.5 64 26147.0 65 20653.0 66 15159.0 67 12519.0 68 9879.0 69 8395.0 70 6911.0 71 5580.0 72 4249.0 73 3414.5 74 2580.0 75 2151.5 76 1723.0 77 1226.0 78 729.0 79 587.5 80 446.0 81 378.5 82 311.0 83 201.0 84 91.0 85 72.5 86 54.0 87 52.0 88 50.0 89 41.0 90 32.0 91 23.0 92 14.0 93 7.5 94 1.0 95 1.0 96 1.0 97 0.5 98 0.0 99 0.0 100 0.0 >>END_MODULE >>Per base N content pass #Base N-Count 1 0.0 2 0.0 3 0.0 4 0.0 5 0.0 6 0.0 7 0.0 8 0.0 9 0.0 10 0.0 11 0.0 12 0.0 13 0.0 14 0.0 15 0.0 16 0.0 17 0.0 18 0.0 19 0.0 20 0.0 21 0.0 22 0.0 23 0.0 24 0.0 25 0.0 26 0.0 27 0.0 28 0.0 29 0.0 30 0.0 31 0.0 32 0.0 33 0.0 34 0.0 35 0.0 36 0.0 37 0.0 38 0.0 39 0.0 40 0.0 41 0.0 42 0.0 43 0.0 44 0.0 45 0.0 46 0.0 47 0.0 48 0.0 49 0.0 50 0.0 >>END_MODULE >>Sequence Length Distribution pass #Length Count 50 2266950.0 >>END_MODULE >>Sequence Duplication Levels fail #Total Deduplicated Percentage 15.068766406270365 #Duplication Level Percentage of deduplicated Percentage of total 1 79.34623736519704 11.956499160726356 2 6.814754099103393 2.053798752711249 3 2.24201585064369 1.0135323939751593 4 1.1861759314476488 0.7149683211089916 5 0.7995893359078586 0.6024412461870186 6 0.596259050888021 0.5390933013273637 7 0.45329831662294157 0.4781452511882682 8 0.3895227638348472 0.46957020305217045 9 0.33720214461179504 0.45730983139636844 >10 4.396746046853403 15.833675273109172 >50 1.552994383459385 17.18809100165373 >100 1.87010412398187 45.71789607558775 >500 0.011547508048500923 1.1767314722050601 >1k 0.0029608994996156214 0.9495411841763892 >5k 2.9608994996156214E-4 0.245884854148862 >10k+ 2.9608994996156214E-4 0.6028216774460669 >>END_MODULE >>Overrepresented sequences warn #Sequence Count Percentage Possible Source CGTTTTTTTTTTTTTTTTTTTTTTTTTTTTTTTTTTTTTTTTTTTTTTTT 13511 0.595999029533073 No Hit GACCAGAAAAATGGTCCTGCCAAGCGGCTACAGTGTTCTTCTTTCAGATA 5511 0.24310196519552701 No Hit AAGGAAGGAAGGAAGAAAGAAAGAAAGAAAGAAAGAAAGAAAGAAAGAAA 4637 0.20454796091665012 No Hit AAGGAAGGAAGAAAGAAAGAAAGAAAGAAAGAAAGAAAGAAAGAAAGAAA 4455 0.19651955270297097 No Hit AAGGAAGGAAGGAAGGAAGAAAGAAAGAAAGAAAGAAAGAAAGAAAGAAA 2564 0.11310350912018349 No Hit >>END_MODULE >>Adapter Content pass #Position Illumina Universal Adapter Illumina Small RNA 3' Adapter Illumina Small RNA 5' Adapter Nextera Transposase Sequence SOLID Small RNA Adapter 1 4.4112133042193257E-5 0.0 0.0 0.0320254085886323 0.0 2 4.4112133042193257E-5 0.0 0.0 0.11142724806458017 0.0 3 4.4112133042193257E-5 0.0 0.0 0.1562010631024063 0.0 4 4.4112133042193257E-5 0.0 0.0 0.2348971084496791 0.0 5 4.4112133042193257E-5 0.0 0.0 0.43865105097156976 0.0 6 4.4112133042193257E-5 0.0 0.0 0.5918966011601491 0.0 7 4.4112133042193257E-5 0.0 0.0 0.7179249652616952 0.0 8 4.4112133042193257E-5 0.0 0.0 1.0220340104545755 0.0 9 4.4112133042193257E-5 0.0 0.0 1.1548556430446195 0.0 10 4.4112133042193257E-5 0.0 0.0 1.4304682502922428 0.0 11 4.4112133042193257E-5 0.0 0.0 1.609475286177463 0.0 12 4.4112133042193257E-5 0.0 0.0 1.791570171375637 0.0 13 4.4112133042193257E-5 0.0 0.0 1.8562385584154921 0.0 14 4.4112133042193257E-5 0.0 0.0 1.8807649043869517 0.0 15 4.4112133042193257E-5 0.0 0.0 1.9208628333223052 0.0 16 4.4112133042193257E-5 0.0 0.0 1.9998676636008734 0.0 17 4.4112133042193257E-5 0.0 0.0 2.0907386576677913 0.0 18 4.4112133042193257E-5 0.0 0.0 2.23692626656962 0.0 19 4.4112133042193257E-5 0.0 0.0 2.3008888594808004 0.0 20 4.4112133042193257E-5 0.0 0.0 2.3678510774388495 0.0 21 4.4112133042193257E-5 0.0 0.0 2.450870111824257 0.0 22 4.4112133042193257E-5 0.0 0.0 2.5401530691016565 0.0 23 4.4112133042193257E-5 0.0 0.0 2.643640133218642 0.0 24 4.4112133042193257E-5 0.0 0.0 2.7155429100774167 0.0 25 4.4112133042193257E-5 0.0 0.0 2.7783585875295 0.0 26 4.4112133042193257E-5 0.0 0.0 2.8439533293632415 0.0 27 4.4112133042193257E-5 0.0 0.0 2.9069895674805357 0.0 28 4.4112133042193257E-5 0.0 0.0 2.977921877412382 0.0 29 4.4112133042193257E-5 0.0 0.0 3.0546769889057988 0.0 30 4.4112133042193257E-5 0.0 0.0 3.1557819978385053 0.0 31 4.4112133042193257E-5 0.0 0.0 3.2431681333950904 0.0 32 4.4112133042193257E-5 0.0 0.0 3.3281722137673966 0.0 33 4.4112133042193257E-5 0.0 0.0 3.4098678841615384 0.0 34 8.822426608438651E-5 0.0 0.0 3.4973422439842077 0.0 35 8.822426608438651E-5 0.0 0.0 3.606960894594058 0.0 36 8.822426608438651E-5 0.0 0.0 3.7018019806347735 0.0 37 8.822426608438651E-5 0.0 0.0 3.7930258717660292 0.0 38 8.822426608438651E-5 0.0 0.0 3.8880875184719557 0.0 >>END_MODULE >>Kmer Content fail #Sequence Count PValue Obs/Exp Max Max Obs/Exp Position CTTCGTA 30 2.5288118E-6 44.0 23 CTCCGAT 20 7.858105E-4 44.0 22 CGTGATA 20 7.858105E-4 44.0 13 CATTGCG 30 2.5288118E-6 44.0 1 CACGCTA 25 4.4442146E-5 44.0 19 CGTCTAC 20 7.858105E-4 44.0 23 CCGCTTA 35 1.4469151E-7 44.0 26 CGCTCGA 35 1.4469151E-7 44.0 27 TATTACG 70 0.0 44.0 1 ACTCGAT 40 8.3182385E-9 44.0 20 TCGTACC 35 1.4469151E-7 44.0 15 ACGTAGA 25 4.4442146E-5 44.0 23 CCAACGG 25 4.4442146E-5 44.0 2 CGGTATA 20 7.858105E-4 44.0 23 TCGAATC 25 4.4442146E-5 44.0 37 GTACGAT 30 2.5288118E-6 44.0 25 GTTGCGA 25 4.4442146E-5 44.0 38 CTTACGA 20 7.858105E-4 44.0 28 CTATACG 95 0.0 41.68421 1 TCGTTAG 170 0.0 41.411762 1 >>END_MODULE