##FastQC 0.11.5 >>Basic Statistics pass #Measure Value Filename SRR1545901_1.fastq.gz File type Conventional base calls Encoding Illumina 1.5 Total Sequences 3251246 Sequences flagged as poor quality 0 Sequence length 50 %GC 45 >>END_MODULE >>Per base sequence quality pass #Base Mean Median Lower Quartile Upper Quartile 10th Percentile 90th Percentile 1 31.728405663551758 31.0 31.0 33.0 30.0 34.0 2 32.15295397518367 33.0 31.0 34.0 30.0 34.0 3 32.196898050778074 33.0 31.0 34.0 30.0 34.0 4 35.90582472073783 37.0 35.0 37.0 35.0 37.0 5 35.89914143685221 37.0 35.0 37.0 35.0 37.0 6 35.95608975758832 37.0 35.0 37.0 35.0 37.0 7 36.13002861056961 37.0 35.0 37.0 35.0 37.0 8 36.0835464311221 37.0 35.0 37.0 35.0 37.0 9 37.907622800612444 39.0 39.0 39.0 35.0 39.0 10 37.610433353858795 39.0 37.0 39.0 35.0 39.0 11 37.365979996592074 39.0 37.0 39.0 35.0 39.0 12 36.73983143693218 39.0 35.0 39.0 33.0 39.0 13 36.53500657901617 39.0 35.0 39.0 33.0 39.0 14 37.54792654877546 40.0 35.0 41.0 33.0 41.0 15 37.73016929509487 40.0 35.0 41.0 33.0 41.0 16 37.793472410269786 40.0 35.0 41.0 33.0 41.0 17 37.728031960669846 40.0 35.0 41.0 33.0 41.0 18 37.64497672584603 39.0 36.0 41.0 33.0 41.0 19 37.55861937238831 39.0 36.0 41.0 33.0 41.0 20 37.38987145236011 39.0 35.0 41.0 33.0 41.0 21 37.266048462650936 39.0 35.0 41.0 33.0 41.0 22 37.27924955540122 39.0 35.0 41.0 33.0 41.0 23 37.269441930878195 39.0 35.0 41.0 33.0 41.0 24 37.24044504783704 39.0 35.0 41.0 33.0 41.0 25 37.144647313676046 39.0 35.0 41.0 33.0 41.0 26 37.04776722524226 39.0 35.0 41.0 33.0 41.0 27 36.96206131433918 39.0 35.0 41.0 33.0 41.0 28 36.93974310156783 38.0 35.0 41.0 33.0 41.0 29 36.864002908423416 38.0 35.0 41.0 32.0 41.0 30 36.73017698445457 38.0 35.0 41.0 32.0 41.0 31 36.53745948476369 38.0 35.0 41.0 31.0 41.0 32 36.37570795934851 38.0 35.0 41.0 31.0 41.0 33 36.18237869419909 38.0 35.0 41.0 30.0 41.0 34 35.98428294875257 38.0 35.0 41.0 30.0 41.0 35 35.765312437139485 38.0 35.0 41.0 29.0 41.0 36 35.627472974976364 38.0 35.0 41.0 29.0 41.0 37 35.54802374228219 38.0 35.0 41.0 28.0 41.0 38 35.45605131078977 38.0 35.0 41.0 28.0 41.0 39 35.3798509863603 38.0 35.0 40.0 27.0 41.0 40 35.20922901558357 38.0 35.0 40.0 26.0 41.0 41 35.08115780842176 38.0 34.0 40.0 25.0 41.0 42 35.06954626011074 38.0 34.0 40.0 26.0 41.0 43 35.00285244487806 37.0 34.0 40.0 25.0 41.0 44 34.849979361758535 37.0 34.0 40.0 24.0 41.0 45 34.760826772259 37.0 34.0 40.0 24.0 41.0 46 34.7155988811674 37.0 34.0 40.0 24.0 41.0 47 34.64695719733296 37.0 34.0 40.0 24.0 41.0 48 34.58149244935634 36.0 34.0 40.0 24.0 41.0 49 34.50987098484704 36.0 34.0 40.0 24.0 41.0 50 34.360032123069125 36.0 34.0 40.0 24.0 41.0 >>END_MODULE >>Per sequence quality scores pass #Quality Count 7 1.0 8 2.0 9 3.0 10 3.0 11 7.0 12 15.0 13 20.0 14 41.0 15 99.0 16 228.0 17 478.0 18 1149.0 19 2275.0 20 3841.0 21 6228.0 22 9789.0 23 14347.0 24 21555.0 25 32424.0 26 46397.0 27 56439.0 28 58698.0 29 59733.0 30 65738.0 31 77508.0 32 95258.0 33 126058.0 34 241092.0 35 469485.0 36 191632.0 37 256256.0 38 443343.0 39 971104.0 >>END_MODULE >>Per base sequence content fail #Base G A T C 1 32.98329317437069 22.24088857010512 29.927510868141017 14.848307387383175 2 32.94346229107241 24.127488353695785 30.352609430353777 12.57643992487803 3 28.556067427687726 24.03589270082916 34.364548237814056 13.04349163366906 4 25.53919328159112 26.798987219053867 33.35284380203774 14.308975697317274 5 23.020312827758957 31.11760844919148 32.044699170717934 13.81737955233163 6 20.595396349584128 40.36187972242027 28.683187922414977 10.35953600558063 7 86.41809939943025 3.797067339721448 8.35030631333341 1.4345269475148912 8 87.78702072989863 2.7164969983815435 7.991889878526572 1.5045923931932559 9 83.84050299485182 4.188917110547771 9.458650621946171 2.5119292726542377 10 46.9585199028311 23.05285419805207 17.371001763631543 12.61762413548529 11 39.26848352908392 23.030770356964684 23.957553504102734 13.743192609848656 12 35.87778347132146 21.83581310057744 27.229960452085137 15.056442976015965 13 21.839227176288723 32.997872200381025 27.66647002410768 17.496430599222577 14 17.35491562311803 34.707585953200706 31.338077770799256 16.599420652882003 15 17.27288553373076 23.108771221863865 42.62959493068196 16.988748313723416 16 19.12965060164626 19.89514173950541 41.10867033746447 19.866537321383863 17 19.903661550064193 20.091343441868133 30.86453624241291 29.14045876565477 18 22.48055053354929 22.708001793773832 34.807086267849314 20.004361404827563 19 27.106346305385685 24.391787025651087 28.503810539097934 19.998056129865287 20 28.85044687482891 23.30854078713207 28.66848586664928 19.172526471389737 21 23.094776587191497 26.787268634855682 31.19557855665182 18.922376221301 22 22.690531568512505 23.59138619470812 29.561466588501762 24.15661564827761 23 20.112412287473788 27.387838385652763 29.056952319203162 23.44279700767029 24 19.776418025581577 23.86272832015787 38.957249005458216 17.403604648802336 25 19.351380978246493 24.749311494731558 35.4827041694169 20.416603357605055 26 18.37950742576846 30.331356040115082 29.86922552153851 21.41991101257795 27 17.76820332881609 30.786873709340973 31.43302598449948 20.011896977343454 28 17.257506814310574 27.042924466496842 36.629649063774316 19.06991965541826 29 17.914670252573934 24.921645424554157 35.65393083144124 21.50975349143067 30 20.43468873164319 28.68423367533555 32.798902328522665 18.082175264498595 31 26.51488075648536 26.22797536698238 29.09112383375481 18.166020042777443 32 28.42906996271583 24.27334012867682 28.99525289688938 18.30233701171797 33 26.73648810333023 26.249197999782236 27.417119467428797 19.597194429458735 34 20.452958650314372 26.038540301164538 30.703121203378643 22.805379845142447 35 20.698526042015892 26.07606437654979 32.12251549098407 21.102894090450246 36 27.45147552661349 26.548652424332086 26.99032924607981 19.009542802974615 37 20.65555789995589 31.698062834986956 28.927678803757082 18.718700461300067 38 21.85682043130541 30.636931194994165 26.92223227648723 20.584016097213194 39 21.60953062302883 30.240314021147586 27.628884433844746 20.521270921978836 40 24.255131724883324 26.08984370915028 27.98351770367422 21.67150686229218 41 19.41830916516314 24.97682426983378 29.788179670194136 25.816686894808942 42 21.57625107420355 25.421822894976266 27.610337698224 25.391588332596182 43 21.320933574389635 25.70445300048043 28.56172679643435 24.41288662869558 44 20.610190677666345 27.613321169791522 29.863135548648117 21.913352603894015 45 19.414618272502295 33.31193640838005 26.150189804155083 21.123255514962572 46 21.40843848789049 30.498614992529017 27.985086333055083 20.10786018652541 47 20.39574981407128 28.341257474826577 29.245556934172313 22.01743577692983 48 21.78029592347057 26.57405806881423 31.38627467746212 20.259371330253078 49 21.524916908778973 26.277986962536826 31.972634491514945 20.22446163716926 50 20.667399513909437 30.281775048704407 29.060274122597924 19.990551314788238 >>END_MODULE >>Per sequence GC content fail #GC Content Count 0 3174.0 1 6438.5 2 9703.0 3 32661.0 4 55619.0 5 37848.0 6 20077.0 7 19702.0 8 19327.0 9 19259.5 10 19192.0 11 18644.0 12 18096.0 13 16770.0 14 15444.0 15 14606.0 16 13768.0 17 13260.0 18 12752.0 19 12575.0 20 12398.0 21 12434.5 22 12471.0 23 13323.5 24 14176.0 25 17670.0 26 21164.0 27 26406.5 28 31649.0 29 38981.0 30 46313.0 31 52505.0 32 58697.0 33 68794.0 34 78891.0 35 88495.5 36 98100.0 37 109333.0 38 120566.0 39 135850.5 40 151135.0 41 189582.0 42 228029.0 43 261074.0 44 294119.0 45 291887.0 46 289655.0 47 282257.5 48 274860.0 49 263963.0 50 253066.0 51 241848.0 52 230630.0 53 209112.0 54 187594.0 55 179006.5 56 170419.0 57 156694.5 58 142970.0 59 126882.5 60 110795.0 61 97285.5 62 83776.0 63 70362.0 64 56948.0 65 44984.5 66 33021.0 67 27135.5 68 21250.0 69 18376.0 70 15502.0 71 13369.5 72 11237.0 73 8925.0 74 6613.0 75 5062.5 76 3512.0 77 2895.0 78 2278.0 79 1665.5 80 1053.0 81 813.0 82 573.0 83 440.0 84 307.0 85 239.5 86 172.0 87 121.0 88 70.0 89 64.0 90 58.0 91 36.0 92 14.0 93 10.5 94 7.0 95 6.0 96 5.0 97 2.5 98 0.0 99 0.5 100 1.0 >>END_MODULE >>Per base N content pass #Base N-Count 1 0.0 2 0.0 3 0.0 4 0.0 5 0.0 6 0.0 7 0.0 8 0.0 9 0.0 10 0.0 11 0.0 12 0.0 13 0.0 14 0.0 15 0.0 16 0.0 17 0.0 18 0.0 19 0.0 20 0.0 21 0.0 22 0.0 23 0.0 24 0.0 25 0.0 26 0.0 27 0.0 28 0.0 29 0.0 30 0.0 31 0.0 32 0.0 33 0.0 34 0.0 35 0.0 36 0.0 37 0.0 38 0.0 39 0.0 40 0.0 41 0.0 42 0.0 43 0.0 44 0.0 45 0.0 46 0.0 47 0.0 48 0.0 49 0.0 50 0.0 >>END_MODULE >>Sequence Length Distribution pass #Length Count 50 3251246.0 >>END_MODULE >>Sequence Duplication Levels fail #Total Deduplicated Percentage 14.459419322212213 #Duplication Level Percentage of deduplicated Percentage of total 1 78.65151853816366 11.372552868720557 2 6.895165458183686 1.9940017731182282 3 2.3652260051018192 1.0259938379870417 4 1.3634152875050547 0.7885677340940044 5 0.9105152355694011 0.6582760795180401 6 0.6756532325963219 0.5861732043911041 7 0.4986754178133118 0.5047389880289435 8 0.42624925157373744 0.4930653331427035 9 0.35626059919067277 0.4636189252512463 >10 4.546686259378742 15.604340875038794 >50 1.348458630919528 14.08134384909049 >100 1.948376166428929 49.772587578150855 >500 0.010781185605535332 0.9760253081495325 >1k 0.002803108257439186 0.6686420303010661 >5k 0.0 0.0 >10k+ 2.1562371211070663E-4 1.010071615017422 >>END_MODULE >>Overrepresented sequences warn #Sequence Count Percentage Possible Source CGTTTTTTTTTTTTTTTTTTTTTTTTTTTTTTTTTTTTTTTTTTTTTTTT 32397 0.9964487461114908 No Hit GACCAGAAAAATGGTCCTGCCAAGCGGCTACAGTGTTCTTCTTTCAGATA 3306 0.10168409280626567 No Hit >>END_MODULE >>Adapter Content pass #Position Illumina Universal Adapter Illumina Small RNA 3' Adapter Illumina Small RNA 5' Adapter Nextera Transposase Sequence SOLID Small RNA Adapter 1 0.0 0.0 0.0 0.013133426384838305 0.0 2 0.0 0.0 0.0 0.04982705092140059 0.0 3 0.0 0.0 0.0 0.0750481507705046 0.0 4 0.0 0.0 0.0 0.10998860129316576 0.0 5 0.0 0.0 0.0 0.18792795131466522 0.0 6 0.0 0.0 0.0 0.2831837394032934 0.0 7 0.0 0.0 0.0 0.3438374087965045 0.0 8 0.0 0.0 0.0 0.5029763973565827 0.0 9 0.0 0.0 0.0 0.5739953236389987 0.0 10 0.0 0.0 0.0 0.6882899663698163 0.0 11 0.0 0.0 0.0 0.8075057993150934 0.0 12 0.0 0.0 0.0 0.901469774972426 0.0 13 0.0 0.0 0.0 0.9392091524295608 0.0 14 0.0 0.0 0.0 0.954987718554671 0.0 15 0.0 0.0 0.0 0.9759642918438038 0.0 16 0.0 0.0 0.0 1.0225310542481252 0.0 17 0.0 0.0 0.0 1.0754953639312437 0.0 18 0.0 0.0 0.0 1.1579560574622776 0.0 19 0.0 0.0 0.0 1.2003398081843084 0.0 20 0.0 0.0 0.0 1.2487212594802115 0.0 21 0.0 0.0 0.0 1.3105129541105165 0.0 22 0.0 0.0 0.0 1.3727967677622672 0.0 23 0.0 0.0 0.0 1.4437849366058428 0.0 24 0.0 0.0 0.0 1.5012705897984957 0.0 25 0.0 0.0 0.0 1.5473144757425308 0.0 26 0.0 0.0 0.0 1.5959112291103166 0.0 27 0.0 0.0 0.0 1.6525971888931197 0.0 28 0.0 0.0 0.0 1.709436935870125 0.0 29 0.0 0.0 0.0 1.7758730037653256 0.0 30 0.0 0.0 0.0 1.8518438777010413 0.0 31 0.0 0.0 0.0 1.9140969339139517 0.0 32 0.0 0.0 0.0 1.9743815140410783 0.0 33 0.0 0.0 0.0 2.037834110368763 0.0 34 0.0 0.0 0.0 2.1069768328819167 0.0 35 3.075743884037074E-5 0.0 0.0 2.197865064655212 0.0 36 3.075743884037074E-5 0.0 0.0 2.2668539999741637 0.0 37 3.075743884037074E-5 0.0 0.0 2.3446703202403016 0.0 38 3.075743884037074E-5 0.0 0.0 2.43660430493417 0.0 >>END_MODULE >>Kmer Content warn #Sequence Count PValue Obs/Exp Max Max Obs/Exp Position CCCGTTA 20 7.8586076E-4 44.000004 43 TACGCAC 45 4.802132E-10 44.0 10 GTCGTAC 45 4.802132E-10 44.0 10 ATACCCG 35 1.4471698E-7 44.0 31 CGGTCTA 480 0.0 42.16667 31 CGTTTTT 15820 0.0 41.85841 1 ACGTAGG 350 0.0 40.857143 2 ATAGCGG 580 0.0 39.448277 2 ATACCGG 190 0.0 39.36842 2 CACGACG 510 0.0 39.254898 26 CGACGGT 525 0.0 38.971428 28 ACGGTCT 515 0.0 38.873787 30 ACGGGAC 635 0.0 38.803146 5 ATATCGC 40 4.1276326E-7 38.500004 24 CATATGC 2100 0.0 38.447617 33 TCGCCGT 155 0.0 38.32258 25 AGGGCGA 2475 0.0 38.22222 6 GTTGATC 2150 0.0 37.860466 16 TTACGCA 35 7.2943167E-6 37.714287 32 GGGCGAT 4375 0.0 37.663998 7 >>END_MODULE