##FastQC 0.11.5 >>Basic Statistics pass #Measure Value Filename SRR1545900_1.fastq.gz File type Conventional base calls Encoding Illumina 1.5 Total Sequences 2453903 Sequences flagged as poor quality 0 Sequence length 50 %GC 43 >>END_MODULE >>Per base sequence quality pass #Base Mean Median Lower Quartile Upper Quartile 10th Percentile 90th Percentile 1 31.688891940716484 31.0 31.0 33.0 30.0 34.0 2 32.10710855319057 33.0 31.0 34.0 30.0 34.0 3 32.04791265180408 33.0 31.0 34.0 30.0 34.0 4 35.81105406366918 37.0 35.0 37.0 35.0 37.0 5 35.842147794757985 37.0 35.0 37.0 35.0 37.0 6 35.89541314387733 37.0 35.0 37.0 35.0 37.0 7 36.08183208545733 37.0 35.0 37.0 35.0 37.0 8 36.02301557967043 37.0 35.0 37.0 35.0 37.0 9 37.739882546294616 39.0 38.0 39.0 35.0 39.0 10 37.53967088348643 39.0 37.0 39.0 35.0 39.0 11 37.36378740316956 39.0 37.0 39.0 35.0 39.0 12 36.85699353234419 39.0 35.0 39.0 33.0 39.0 13 36.6888903106602 39.0 35.0 39.0 33.0 39.0 14 37.79635625369055 40.0 35.0 41.0 33.0 41.0 15 37.91678032913281 40.0 35.0 41.0 33.0 41.0 16 37.951976911882824 40.0 35.0 41.0 33.0 41.0 17 37.86760438371036 40.0 35.0 41.0 33.0 41.0 18 37.71747253253287 39.0 36.0 41.0 33.0 41.0 19 37.586776249916966 39.0 36.0 41.0 33.0 41.0 20 37.39073712367604 39.0 35.0 41.0 33.0 41.0 21 37.26337960383927 39.0 35.0 41.0 33.0 41.0 22 37.27027963208 39.0 35.0 41.0 33.0 41.0 23 37.24372601524999 39.0 35.0 41.0 33.0 41.0 24 37.19346852748458 39.0 35.0 41.0 33.0 41.0 25 37.09801446919459 39.0 35.0 41.0 33.0 41.0 26 37.00271282116693 39.0 35.0 41.0 33.0 41.0 27 36.899304495735976 39.0 35.0 41.0 32.0 41.0 28 36.816921858769476 38.0 35.0 41.0 32.0 41.0 29 36.71908302813925 38.0 35.0 41.0 32.0 41.0 30 36.58496158976129 38.0 35.0 41.0 31.0 41.0 31 36.3828818824542 38.0 35.0 41.0 31.0 41.0 32 36.148713702212355 38.0 35.0 41.0 30.0 41.0 33 35.900651329738785 38.0 35.0 41.0 30.0 41.0 34 35.62510376327019 38.0 35.0 41.0 27.0 41.0 35 35.35409060586339 38.0 35.0 41.0 26.0 41.0 36 35.19570822481573 38.0 35.0 41.0 24.0 41.0 37 35.11230598764499 38.0 35.0 41.0 24.0 41.0 38 35.009427838019676 38.0 34.0 40.0 24.0 41.0 39 34.938471080560234 38.0 34.0 40.0 23.0 41.0 40 34.78894072015071 38.0 34.0 40.0 23.0 41.0 41 34.63276380525229 38.0 34.0 40.0 23.0 41.0 42 34.59551335158725 38.0 34.0 40.0 23.0 41.0 43 34.5145431583889 37.0 34.0 40.0 23.0 41.0 44 34.377657144557055 37.0 34.0 40.0 22.0 41.0 45 34.27387879635014 37.0 34.0 40.0 22.0 41.0 46 34.21688999116917 37.0 34.0 40.0 22.0 41.0 47 34.136990744947944 37.0 34.0 40.0 22.0 41.0 48 34.04631886427459 36.0 34.0 40.0 21.0 41.0 49 33.97821837293487 36.0 34.0 40.0 20.0 41.0 50 33.83624617598984 36.0 33.0 40.0 20.0 41.0 >>END_MODULE >>Per sequence quality scores pass #Quality Count 8 1.0 9 0.0 10 2.0 11 9.0 12 9.0 13 19.0 14 51.0 15 86.0 16 203.0 17 485.0 18 1007.0 19 1995.0 20 3534.0 21 5780.0 22 8864.0 23 13325.0 24 19624.0 25 29921.0 26 43425.0 27 51867.0 28 52460.0 29 51376.0 30 54017.0 31 60668.0 32 72571.0 33 93675.0 34 167761.0 35 309007.0 36 151270.0 37 197158.0 38 338213.0 39 725520.0 >>END_MODULE >>Per base sequence content fail #Base G A T C 1 34.13032218469923 20.64454055437399 27.47789949317475 17.747237767752026 2 37.82292943119593 23.264000247768553 26.67085862807128 12.24221169296423 3 29.09768642036788 23.95889324068637 34.23452353251127 12.708896806434483 4 25.674690482875643 25.99291822048386 33.64688824293381 14.685503053706686 5 23.069860544609956 30.02050203288394 32.671421812516634 14.238215609989474 6 20.906042333376664 38.0190659532997 31.156936521125733 9.917955192197898 7 81.31617264415098 4.461382540385663 11.982054710394014 2.2403901050693524 8 81.77291441430245 3.858506224573669 12.02512894763974 2.3434504134841516 9 76.27815769408978 5.739957936397649 14.237278327627456 3.744606041885111 10 41.72601769507597 25.138320463359797 21.025403204609148 12.110258636955088 11 35.08618718832815 23.715118323747923 27.799591100381722 13.399103387542214 12 31.51705670517539 22.72506288960892 31.07115480929768 14.686725595918013 13 21.646250890927636 31.35800396348185 31.184362218066486 15.811382927524031 14 17.32220059228095 32.74819746338792 34.04682255166565 15.88277939266548 15 17.081400528056733 23.353653343265808 43.786123575381744 15.77882255329571 16 19.46926997521907 21.668297402138553 40.75226282375465 18.110169798887732 17 19.310013476490308 21.461402508575116 33.25640826063621 25.972175754298355 18 22.01313580854663 22.81659054983021 36.191487601588165 18.978786040034997 19 26.049725681903478 23.89760312449188 31.069484001608867 18.98318719199577 20 27.04516030177232 23.733741716767128 31.16329374062463 18.057804240835925 21 23.0864056158699 25.7991860313957 33.23582880007889 17.878579552655506 22 22.450072394874613 23.84315924468082 31.69143197591755 22.015336384527018 23 19.94276057366571 26.466368067523447 31.46990732722524 22.1209640315856 24 19.852822218319144 23.920301658215504 38.6159518122762 17.610924311189155 25 19.1764303641994 25.176015514875687 36.2812221998995 19.366331921025402 26 18.33817392130007 29.009337369896038 32.128450065059624 20.524038643744273 27 18.04855367143689 29.459681169141565 33.061820292000135 19.42994486742141 28 17.33768612695775 26.95196183386222 37.35159865732264 18.358753381857394 29 18.378558565680876 24.473665014468786 37.03919837092175 20.108578048928585 30 19.46645812813302 27.416242614316864 34.93414368864621 18.183155568903906 31 25.137790695068222 26.2029509723897 30.612416220201045 18.046842112341032 32 25.767318431087126 26.03126529451246 31.02274213772916 17.178674136671255 33 24.74348008050848 26.582917091669884 29.894009665418725 18.779593162402914 34 20.083678939224576 26.949312992404344 31.967278250199783 20.999729818171296 35 20.48895168227921 26.721757135469492 32.48461736262599 20.304673819625307 36 25.03497489509569 27.252177449556893 29.496805700958838 18.216041954388583 37 20.37456248270612 30.61583933839276 30.242678704088956 18.766919474812166 38 20.546044403548144 30.450307122979186 28.99792697592366 20.005721497549008 39 20.48296122544371 29.447170487178997 29.78528491142478 20.284583375952515 40 22.635409794111666 26.85362868866455 29.4443178886859 21.066643628537886 41 19.120926947805188 26.34199477322453 30.485027321780855 24.052050957189426 42 20.835949913260627 27.241745089353575 28.62419582192124 23.298109175464557 43 20.902415458149733 27.08835679323918 29.12335980680573 22.88586794180536 44 20.031557889615033 28.51445228275119 30.191372682620297 21.262617145013472 45 18.919003725901145 32.635968088388175 27.949148764233954 20.495879421476726 46 21.248272649733913 30.044871374296378 29.61694084892516 19.08991512704455 47 20.459936680463734 28.765317944515328 30.017364174541537 20.7573812004794 48 21.27280499677453 27.09512152680852 31.500878396578834 20.13119507983812 49 20.969696031179716 26.765075881157486 32.39072612079614 19.87450196686666 50 19.668014587373666 30.338485262049886 30.2582049901728 19.735295160403652 >>END_MODULE >>Per sequence GC content fail #GC Content Count 0 2984.0 1 5369.0 2 7754.0 3 35526.5 4 63299.0 5 42664.0 6 22029.0 7 21114.0 8 20199.0 9 20172.0 10 20145.0 11 19323.0 12 18501.0 13 17609.5 14 16718.0 15 15713.5 16 14709.0 17 14040.5 18 13372.0 19 12834.0 20 12296.0 21 13346.5 22 14397.0 23 16003.5 24 17610.0 25 19967.0 26 22324.0 27 25650.5 28 28977.0 29 36122.0 30 43267.0 31 50115.5 32 56964.0 33 62713.5 34 68463.0 35 78006.5 36 87550.0 37 90773.0 38 93996.0 39 107680.5 40 121365.0 41 146281.5 42 171198.0 43 183760.5 44 196323.0 45 198664.5 46 201006.0 47 195031.5 48 189057.0 49 181800.5 50 174544.0 51 169528.5 52 164513.0 53 148036.0 54 131559.0 55 119953.0 56 108347.0 57 100653.0 58 92959.0 59 86102.0 60 79245.0 61 69175.5 62 59106.0 63 50794.0 64 42482.0 65 33477.5 66 24473.0 67 21288.5 68 18104.0 69 15374.5 70 12645.0 71 10889.0 72 9133.0 73 7316.5 74 5500.0 75 4297.5 76 3095.0 77 2486.5 78 1878.0 79 1367.5 80 857.0 81 674.0 82 491.0 83 345.5 84 200.0 85 167.5 86 135.0 87 99.5 88 64.0 89 48.0 90 32.0 91 26.0 92 20.0 93 14.5 94 9.0 95 8.5 96 8.0 97 4.0 98 0.0 99 0.5 100 1.0 >>END_MODULE >>Per base N content pass #Base N-Count 1 0.0 2 0.0 3 0.0 4 0.0 5 0.0 6 0.0 7 0.0 8 0.0 9 0.0 10 0.0 11 0.0 12 0.0 13 0.0 14 0.0 15 0.0 16 0.0 17 0.0 18 0.0 19 0.0 20 0.0 21 0.0 22 0.0 23 0.0 24 0.0 25 0.0 26 0.0 27 0.0 28 0.0 29 0.0 30 0.0 31 0.0 32 0.0 33 0.0 34 0.0 35 0.0 36 0.0 37 0.0 38 0.0 39 0.0 40 0.0 41 0.0 42 0.0 43 0.0 44 0.0 45 0.0 46 0.0 47 0.0 48 0.0 49 0.0 50 0.0 >>END_MODULE >>Sequence Length Distribution pass #Length Count 50 2453903.0 >>END_MODULE >>Sequence Duplication Levels fail #Total Deduplicated Percentage 18.560634835041824 #Duplication Level Percentage of deduplicated Percentage of total 1 78.12995803517747 14.501416207680709 2 6.050989806071366 2.2462042436210234 3 2.4309648003789976 1.3536074987002478 4 1.4853486169942547 1.1027605313105906 5 1.0119201041217942 0.9390939767421064 6 0.7532602518605295 0.8388593082320955 7 0.644016419915345 0.8367347518473773 8 0.5407359747425818 0.8029122375493969 9 0.4395058148463525 0.7341756243516587 >10 5.616289300904079 23.93382759780401 >50 1.906430526314895 25.663952729787475 >100 0.9859067517386818 24.707646857584688 >500 0.0033382835240437 0.40935343674947455 >1k 0.0011127611746812333 0.3671375727375711 >5k 0.0 0.0 >10k+ 2.2255223493624667E-4 1.5623174253015768 >>END_MODULE >>Overrepresented sequences fail #Sequence Count Percentage Possible Source CGTTTTTTTTTTTTTTTTTTTTTTTTTTTTTTTTTTTTTTTTTTTTTTTT 37822 1.5412997172259866 No Hit GACCAGAAAAATGGTCCTGCCAAGCGGCTACAGTGTTCTTCTTTCAGATA 3375 0.13753599877419767 No Hit >>END_MODULE >>Adapter Content pass #Position Illumina Universal Adapter Illumina Small RNA 3' Adapter Illumina Small RNA 5' Adapter Nextera Transposase Sequence SOLID Small RNA Adapter 1 4.075140704420672E-5 0.0 0.0 0.014018484023207111 0.0 2 4.075140704420672E-5 0.0 0.0 0.06389820624531614 0.0 3 4.075140704420672E-5 0.0 0.0 0.11137359545181696 0.0 4 4.075140704420672E-5 0.0 0.0 0.15493684958207393 0.0 5 4.075140704420672E-5 0.0 0.0 0.276579799609031 0.0 6 4.075140704420672E-5 0.0 0.0 0.4177834250172073 0.0 7 4.075140704420672E-5 0.0 0.0 0.5075180233285504 0.0 8 4.075140704420672E-5 0.0 0.0 0.6765956111549641 0.0 9 4.075140704420672E-5 0.0 0.0 0.7653114242902022 0.0 10 4.075140704420672E-5 0.0 0.0 0.9106309418098434 0.0 11 4.075140704420672E-5 0.0 0.0 1.0579472782746506 0.0 12 4.075140704420672E-5 0.0 0.0 1.1697691392039538 0.0 13 4.075140704420672E-5 0.0 0.0 1.2231127310248204 0.0 14 4.075140704420672E-5 0.0 0.0 1.2495196427894664 0.0 15 4.075140704420672E-5 0.0 0.0 1.2795126783740025 0.0 16 4.075140704420672E-5 0.0 0.0 1.341332562860064 0.0 17 4.075140704420672E-5 0.0 0.0 1.4064533113167066 0.0 18 4.075140704420672E-5 0.0 0.0 1.5040936825946258 0.0 19 4.075140704420672E-5 0.0 0.0 1.552628608384276 0.0 20 4.075140704420672E-5 0.0 0.0 1.609802832467298 0.0 21 4.075140704420672E-5 0.0 0.0 1.673864044340791 0.0 22 4.075140704420672E-5 0.0 0.0 1.7370287252593113 0.0 23 4.075140704420672E-5 0.0 0.0 1.8110332804515907 0.0 24 4.075140704420672E-5 0.0 0.0 1.868248255941657 0.0 25 4.075140704420672E-5 0.0 0.0 1.9182094809778545 0.0 26 4.075140704420672E-5 0.0 0.0 1.9687004743056267 0.0 27 4.075140704420672E-5 0.0 0.0 2.02143279502083 0.0 28 4.075140704420672E-5 0.0 0.0 2.0761211832741555 0.0 29 8.150281408841344E-5 0.0 0.0 2.1353329777093877 0.0 30 8.150281408841344E-5 0.0 0.0 2.2201774071754263 0.0 31 8.150281408841344E-5 0.0 0.0 2.288517516788561 0.0 32 8.150281408841344E-5 0.0 0.0 2.3566131179594305 0.0 33 8.150281408841344E-5 0.0 0.0 2.421733866416073 0.0 34 8.150281408841344E-5 0.0 0.0 2.4905222415066937 0.0 35 8.150281408841344E-5 0.0 0.0 2.5717397957457977 0.0 36 8.150281408841344E-5 0.0 0.0 2.6387351089264737 0.0 37 8.150281408841344E-5 0.0 0.0 2.713880703515991 0.0 38 8.150281408841344E-5 0.0 0.0 2.7960355401171113 0.0 >>END_MODULE >>Kmer Content fail #Sequence Count PValue Obs/Exp Max Max Obs/Exp Position TAGCGAT 45 4.802132E-10 44.0 29 CGTTTTT 17765 0.0 42.204334 1 TCGATAG 120 0.0 40.333332 1 TACGGGA 725 0.0 40.055172 4 CGGATAC 45 2.3528628E-8 39.11111 6 ACGGGAT 755 0.0 38.463577 5 TACACCG 35 7.2935854E-6 37.714287 31 CATACGA 805 0.0 37.714283 18 TAGCCGT 65 1.0913936E-11 37.23077 44 CTAGCGG 325 0.0 37.23077 2 CGTTAGG 190 0.0 37.05263 2 CGTTCGA 125 0.0 36.96 14 TGTTACG 250 0.0 36.96 1 TTACGGG 885 0.0 36.79096 3 AGGGCGA 2040 0.0 36.77451 6 ACGTTAC 60 1.9826984E-10 36.666664 40 CTATCGA 30 1.3015258E-4 36.666664 15 GCGCGAC 650 0.0 36.553844 9 CGACGGT 200 0.0 36.300003 28 GGGCGAT 3570 0.0 36.29692 7 >>END_MODULE