##FastQC 0.11.5 >>Basic Statistics pass #Measure Value Filename SRR1545896_1.fastq.gz File type Conventional base calls Encoding Illumina 1.5 Total Sequences 1979058 Sequences flagged as poor quality 0 Sequence length 50 %GC 44 >>END_MODULE >>Per base sequence quality pass #Base Mean Median Lower Quartile Upper Quartile 10th Percentile 90th Percentile 1 31.745707301150347 31.0 31.0 33.0 30.0 34.0 2 32.165838494879885 33.0 31.0 34.0 30.0 34.0 3 32.22274334557148 34.0 31.0 34.0 30.0 34.0 4 35.9039340938972 37.0 35.0 37.0 35.0 37.0 5 35.89011236659057 37.0 35.0 37.0 35.0 37.0 6 35.945866164609626 37.0 35.0 37.0 35.0 37.0 7 36.14950244004976 37.0 35.0 37.0 35.0 37.0 8 36.10994169953584 37.0 35.0 37.0 35.0 37.0 9 37.93853894125387 39.0 39.0 39.0 35.0 39.0 10 37.66110391913729 39.0 37.0 39.0 35.0 39.0 11 37.34543808215828 39.0 37.0 39.0 35.0 39.0 12 36.478788898556786 38.0 35.0 39.0 33.0 39.0 13 36.229150939487376 38.0 35.0 39.0 33.0 39.0 14 37.22145333790116 39.0 35.0 41.0 33.0 41.0 15 37.44270809647822 39.0 35.0 41.0 33.0 41.0 16 37.539755277510814 39.0 35.0 41.0 33.0 41.0 17 37.46016438123592 39.0 35.0 41.0 33.0 41.0 18 37.413336546983466 39.0 35.0 41.0 33.0 41.0 19 37.34262108538507 38.0 35.0 41.0 33.0 41.0 20 37.17224457292308 38.0 35.0 41.0 33.0 41.0 21 37.02633020356149 38.0 35.0 41.0 33.0 41.0 22 37.01589038825542 38.0 35.0 41.0 33.0 41.0 23 37.0141506716832 38.0 35.0 41.0 33.0 41.0 24 36.975189711468786 38.0 35.0 41.0 33.0 41.0 25 36.88448696298946 38.0 35.0 41.0 33.0 41.0 26 36.784962340669146 38.0 35.0 41.0 33.0 41.0 27 36.688876222930304 38.0 35.0 41.0 32.0 41.0 28 36.70533556874028 38.0 35.0 41.0 32.0 41.0 29 36.67113293294082 38.0 35.0 41.0 32.0 41.0 30 36.57932763971546 38.0 35.0 41.0 32.0 41.0 31 36.37609357583254 38.0 35.0 41.0 31.0 41.0 32 36.19882337960787 38.0 35.0 41.0 31.0 41.0 33 36.03096119466938 38.0 35.0 41.0 30.0 41.0 34 35.90720989480854 38.0 35.0 41.0 30.0 41.0 35 35.70684790440705 38.0 35.0 41.0 30.0 41.0 36 35.54779546632792 37.0 35.0 40.0 29.0 41.0 37 35.47624829590644 37.0 35.0 40.0 29.0 41.0 38 35.41768760693218 37.0 35.0 40.0 29.0 41.0 39 35.39623699760189 37.0 35.0 40.0 29.0 41.0 40 35.24206314317215 37.0 35.0 40.0 27.0 41.0 41 35.17422076563698 37.0 34.0 40.0 27.0 41.0 42 35.143388925438266 37.0 35.0 40.0 27.0 41.0 43 35.066797435951855 37.0 34.0 40.0 27.0 41.0 44 34.94414160676443 36.0 34.0 40.0 27.0 41.0 45 34.84610809789304 36.0 34.0 40.0 27.0 41.0 46 34.814733069975716 36.0 34.0 40.0 27.0 41.0 47 34.755692859936396 36.0 34.0 40.0 26.0 41.0 48 34.70551090468293 36.0 34.0 40.0 26.0 41.0 49 34.66602494722237 36.0 34.0 40.0 26.0 41.0 50 34.466739226440055 35.0 34.0 40.0 25.0 41.0 >>END_MODULE >>Per sequence quality scores pass #Quality Count 9 1.0 10 2.0 11 2.0 12 1.0 13 9.0 14 14.0 15 41.0 16 92.0 17 260.0 18 525.0 19 1256.0 20 2240.0 21 3803.0 22 5860.0 23 8560.0 24 12627.0 25 18800.0 26 25801.0 27 31504.0 28 33398.0 29 35469.0 30 39632.0 31 47117.0 32 58720.0 33 80280.0 34 161433.0 35 360020.0 36 106277.0 37 138323.0 38 242352.0 39 564639.0 >>END_MODULE >>Per base sequence content fail #Base G A T C 1 33.65490046274541 23.065114817251438 29.176608265144328 14.103376454858827 2 31.853639458772808 24.38038703261855 30.753621167242194 13.012352341366448 3 28.97474455018499 25.043682398393578 32.570849363687174 13.410723687734267 4 25.92339385707746 26.941605551732188 32.805203283582394 14.329797307607963 5 22.217135627151908 31.861623055008998 31.59270723748369 14.328534080355402 6 20.794640682587374 40.72765932074755 28.56616632761647 9.911533669048609 7 87.721178459651 3.8017076811291033 7.078670761544129 1.398443097675763 8 89.1777300109446 2.5827944405873904 6.757305748492465 1.4821697999755439 9 85.46990537922588 4.417657289478125 7.956714760254627 2.155722571041374 10 52.82391925855634 25.599401331340466 12.824636771635797 8.752042638467392 11 44.69399077743048 19.70558720360899 24.03022043820848 11.570201580752054 12 39.65391615607021 22.20647398914029 25.055152501846838 13.084457352942664 13 19.671277951429417 40.870404000287 25.797273248181714 13.661044800101866 14 14.711392996061761 41.261145454049355 30.84639257667032 13.18106897321857 15 13.83264159008983 22.296921060423696 49.94300318636442 13.92743416312205 16 16.28284769824836 18.80248077620767 46.73410279031741 18.180568735226558 17 16.91804888992642 18.767767291307276 30.591574375283592 33.72260944348271 18 21.65712172154631 22.088438034660935 36.626465722581145 19.62797452121161 19 28.281637021249505 23.364095443387715 28.5358994026451 19.818368132717687 20 30.746799740078362 22.993818271116865 26.972680942145207 19.286701046659573 21 21.5276661927038 27.931419897749333 30.500520954918958 20.040392954627908 22 22.462605946869672 23.83851307035974 28.185682279144924 25.513198703625665 23 18.31108537496122 29.450678049860084 28.151474085145562 24.086762490033138 24 18.52548030426597 23.146264535955996 41.328652318426236 16.999602841351795 25 16.22959003728036 24.977135586728636 39.066970245440004 19.726304130551 26 16.41826565972296 34.645523274204194 29.36639552756918 19.569815538503672 27 16.80395420447506 33.72847081793459 31.05800840601943 18.409566571570917 28 14.584059689003556 28.066837859223938 39.91697059914363 17.432131852628878 29 15.452755806045099 24.64303724297115 39.30834770885947 20.595859242124284 30 19.028547925326087 29.956120538155023 32.81707761975647 18.198253916762418 31 29.174991334261048 25.825670596819293 26.965657398620962 18.0336806702987 32 29.71034704389664 25.966444641844756 27.9676997844429 16.3555085298157 33 26.98930501278891 27.002038343494732 26.731505595086148 19.277151048630206 34 18.877465945919724 28.28345606849319 29.21415137909046 23.624926606496626 35 19.967580535790262 26.210752792490165 33.13657305647435 20.685093615245233 36 29.218749526289777 26.0165694992264 27.041198388324144 17.723482586159676 37 20.165300865361196 32.466052030814666 29.755520050448244 17.613127053375898 38 20.100623630030046 33.10281962428589 25.892217408484235 20.904339337199822 39 20.4300732974981 31.119704425034538 28.507097821286692 19.943124456180666 40 23.873984491611665 25.91071105546174 26.567083935892732 23.64822051703386 41 17.749151363931727 25.230084211781566 28.500630097753575 28.52013432653313 42 21.738473556611275 25.56276774101618 25.930922691502722 26.767836010869818 43 21.59901326792848 26.027736428139043 27.571703305309903 24.801546998622577 44 19.22328703858098 30.388952723972718 29.594736485742207 20.793023751704094 45 17.47589004465761 37.70642396534109 24.355728836648545 20.461957153352756 46 21.377544266009384 32.19920790598355 26.714932053532543 19.70831577447452 47 20.432549222913124 28.48284385803751 28.34783012928373 22.736776789765635 48 22.58791809032378 25.33291091014008 31.983549749426242 20.0956212501099 49 21.004538522873002 24.49483542170063 33.57723725125793 20.923388804168447 50 19.560316069564408 32.99549583690827 27.692164656114173 19.75202343741315 >>END_MODULE >>Per sequence GC content fail #GC Content Count 0 1999.0 1 3455.5 2 4912.0 3 13536.0 4 22160.0 5 16029.0 6 9898.0 7 9935.0 8 9972.0 9 10067.0 10 10162.0 11 9903.5 12 9645.0 13 9399.5 14 9154.0 15 8331.5 16 7509.0 17 7221.0 18 6933.0 19 6630.5 20 6328.0 21 6775.0 22 7222.0 23 8125.0 24 9028.0 25 11824.0 26 14620.0 27 16684.5 28 18749.0 29 23035.0 30 27321.0 31 32507.0 32 37693.0 33 44999.5 34 52306.0 35 54972.0 36 57638.0 37 65346.0 38 73054.0 39 92974.5 40 112895.0 41 146327.5 42 179760.0 43 197945.5 44 216131.0 45 211528.0 46 206925.0 47 190577.5 48 174230.0 49 165636.5 50 157043.0 51 148943.0 52 140843.0 53 125641.0 54 110439.0 55 97358.0 56 84277.0 57 74451.0 58 64625.0 59 55983.0 60 47341.0 61 39704.0 62 32067.0 63 26810.0 64 21553.0 65 17100.5 66 12648.0 67 10047.5 68 7447.0 69 6250.0 70 5053.0 71 4511.5 72 3970.0 73 3175.5 74 2381.0 75 1929.5 76 1478.0 77 1136.5 78 795.0 79 562.0 80 329.0 81 284.5 82 240.0 83 193.5 84 147.0 85 109.5 86 72.0 87 53.0 88 34.0 89 25.5 90 17.0 91 13.5 92 10.0 93 7.0 94 4.0 95 2.0 96 0.0 97 0.5 98 1.0 99 0.5 100 0.0 >>END_MODULE >>Per base N content pass #Base N-Count 1 0.0 2 0.0 3 0.0 4 0.0 5 0.0 6 0.0 7 0.0 8 0.0 9 0.0 10 0.0 11 0.0 12 0.0 13 0.0 14 0.0 15 0.0 16 0.0 17 0.0 18 0.0 19 0.0 20 0.0 21 0.0 22 0.0 23 0.0 24 0.0 25 0.0 26 0.0 27 0.0 28 0.0 29 0.0 30 0.0 31 0.0 32 0.0 33 0.0 34 0.0 35 0.0 36 0.0 37 0.0 38 0.0 39 0.0 40 0.0 41 0.0 42 0.0 43 0.0 44 0.0 45 0.0 46 0.0 47 0.0 48 0.0 49 0.0 50 0.0 >>END_MODULE >>Sequence Length Distribution pass #Length Count 50 1979058.0 >>END_MODULE >>Sequence Duplication Levels fail #Total Deduplicated Percentage 14.33575489382565 #Duplication Level Percentage of deduplicated Percentage of total 1 79.0398150294001 11.330954151147967 2 6.917750392412311 1.983423480845782 3 2.229586385691437 0.9588841181964918 4 1.1753509763396708 0.6739817404409676 5 0.7872385060857536 0.564282913311342 6 0.5958457173759533 0.5125138895302427 7 0.46833873657775704 0.46997925344038916 8 0.36037519994263006 0.41330004289527644 9 0.3077595752232904 0.397076925296609 >10 4.431953728364271 15.081268178961771 >50 1.5861254371127553 16.60407376046383 >100 2.092373546946947 49.579215164774226 >500 0.006060717379127265 0.5525883381455576 >1k 0.0010695383610224585 0.2809450698100379 >5k 0.0 0.0 >10k+ 3.565127870074862E-4 0.5975129727395221 >>END_MODULE >>Overrepresented sequences warn #Sequence Count Percentage Possible Source CGTTTTTTTTTTTTTTTTTTTTTTTTTTTTTTTTTTTTTTTTTTTTTTTT 11691 0.5907355923878936 No Hit GACCAGAAAAATGGTCCTGCCAAGCGGCTACAGTGTTCTTCTTTCAGATA 2978 0.1504756303251345 No Hit >>END_MODULE >>Adapter Content pass #Position Illumina Universal Adapter Illumina Small RNA 3' Adapter Illumina Small RNA 5' Adapter Nextera Transposase Sequence SOLID Small RNA Adapter 1 0.0 0.0 0.0 0.022687561456005836 0.0 2 0.0 0.0 0.0 0.08256453322742437 0.0 3 0.0 0.0 0.0 0.11869283265068532 0.0 4 0.0 0.0 0.0 0.17649811172790286 0.0 5 0.0 0.0 0.0 0.30029438247893697 0.0 6 0.0 0.0 0.0 0.42191790235556514 0.0 7 0.0 0.0 0.0 0.5042803192225797 0.0 8 0.0 0.0 0.0 0.7119548795437021 0.0 9 0.0 0.0 0.0 0.7880011601479088 0.0 10 0.0 0.0 0.0 0.913667007232734 0.0 11 0.0 0.0 0.0 1.0368569289025384 0.0 12 0.0 0.0 0.0 1.143675425379145 0.0 13 0.0 0.0 0.0 1.1867767392365458 0.0 14 0.0 0.0 0.0 1.2004701226543133 0.0 15 0.0 0.0 0.0 1.2257346677055447 0.0 16 0.0 0.0 0.0 1.280659788646922 0.0 17 0.0 0.0 0.0 1.3494804093664763 0.0 18 0.0 0.0 0.0 1.458370598537284 0.0 19 0.0 0.0 0.0 1.5060700595940089 0.0 20 0.0 0.0 0.0 1.55902454602139 0.0 21 0.0 0.0 0.0 1.6339591866433425 0.0 22 0.0 0.0 0.0 1.7080853618236556 0.0 23 0.0 0.0 0.0 1.7997956603596257 0.0 24 0.0 0.0 0.0 1.864675012051188 0.0 25 0.0 0.0 0.0 1.9196001329925652 0.0 26 0.0 0.0 0.0 1.977001179348963 0.0 27 0.0 0.0 0.0 2.0304609566773686 0.0 28 0.0 0.0 0.0 2.0961487738105706 0.0 29 0.0 0.0 0.0 2.1612807709526454 0.0 30 0.0 0.0 0.0 2.2512730804251317 0.0 31 0.0 0.0 0.0 2.3395979299242367 0.0 32 5.052909010246289E-5 0.0 0.0 2.4144315123659843 0.0 33 5.052909010246289E-5 0.0 0.0 2.493863242007056 0.0 34 0.0010105818020492577 0.0 0.0 2.576175129783968 0.0 35 0.0010611108921517206 0.0 0.0 2.6778901881602257 0.0 36 0.0010611108921517206 0.0 0.0 2.7664676831098434 0.0 37 0.0010611108921517206 0.0 0.0 2.8565610507625343 0.0 38 0.0010611108921517206 0.0 0.0 2.943066853017951 0.0 >>END_MODULE >>Kmer Content warn #Sequence Count PValue Obs/Exp Max Max Obs/Exp Position CACGGTA 20 7.857861E-4 44.000004 21 CGCATTA 20 7.857861E-4 44.000004 40 ATAATCG 20 7.857861E-4 44.000004 10 AGGACGC 20 7.857861E-4 44.000004 26 CGTAGTC 20 7.857861E-4 44.000004 17 CCGTTCG 20 7.857861E-4 44.000004 42 CCGTTCA 20 7.857861E-4 44.000004 39 GGTACGT 30 2.5286463E-6 44.0 18 CGCATGA 30 2.5286463E-6 44.0 14 CCGCTAA 30 2.5286463E-6 44.0 24 TACGACT 25 4.4440087E-5 44.0 10 CTACCGG 30 2.5286463E-6 44.0 2 CCGAATA 25 4.4440087E-5 44.0 28 TCGAGGT 50 2.7284841E-11 44.0 42 AGTACGC 25 4.4440087E-5 44.0 40 TCGCCGT 45 4.802132E-10 43.999996 25 CGATTCG 90 0.0 43.999996 10 TGGGCGA 770 0.0 41.42857 6 CGTTTTT 7375 0.0 41.255592 1 CGATAAG 80 0.0 41.250004 10 >>END_MODULE