##FastQC 0.11.5 >>Basic Statistics pass #Measure Value Filename SRR1545895_1.fastq.gz File type Conventional base calls Encoding Illumina 1.5 Total Sequences 1969910 Sequences flagged as poor quality 0 Sequence length 50 %GC 44 >>END_MODULE >>Per base sequence quality pass #Base Mean Median Lower Quartile Upper Quartile 10th Percentile 90th Percentile 1 31.751723682807842 31.0 31.0 33.0 30.0 34.0 2 32.170462609966954 33.0 31.0 34.0 30.0 34.0 3 32.20512053850176 34.0 31.0 34.0 30.0 34.0 4 35.86984379997056 37.0 35.0 37.0 35.0 37.0 5 35.86648628617551 37.0 35.0 37.0 35.0 37.0 6 35.913340203359546 37.0 35.0 37.0 35.0 37.0 7 36.130357224441724 37.0 35.0 37.0 35.0 37.0 8 36.095927225101654 37.0 35.0 37.0 35.0 37.0 9 37.912231015630155 39.0 39.0 39.0 35.0 39.0 10 37.67569076759852 39.0 38.0 39.0 35.0 39.0 11 37.33390205643913 39.0 37.0 39.0 35.0 39.0 12 36.03537674309994 37.0 35.0 39.0 33.0 39.0 13 35.62926326583448 37.0 35.0 39.0 32.0 39.0 14 36.46690660994665 38.0 35.0 41.0 32.0 41.0 15 36.783287053723264 38.0 35.0 41.0 33.0 41.0 16 36.94917229721155 37.0 35.0 41.0 33.0 41.0 17 36.905038808879596 37.0 35.0 41.0 33.0 41.0 18 36.868524957993 37.0 35.0 40.0 33.0 41.0 19 36.745678228954624 37.0 35.0 40.0 33.0 41.0 20 36.521742110045636 36.0 35.0 40.0 33.0 41.0 21 36.36248407287643 35.0 35.0 40.0 32.0 41.0 22 36.327827667253835 35.0 35.0 40.0 32.0 41.0 23 36.35366590351843 35.0 35.0 40.0 32.0 41.0 24 36.308353681132644 35.0 35.0 40.0 33.0 41.0 25 36.206516541364834 35.0 35.0 40.0 32.0 41.0 26 36.079798569477795 35.0 35.0 40.0 32.0 41.0 27 35.98099913194004 35.0 35.0 40.0 32.0 41.0 28 36.033436552938966 36.0 35.0 40.0 32.0 41.0 29 36.033774131813125 36.0 35.0 40.0 32.0 41.0 30 35.95032463412034 36.0 35.0 40.0 32.0 41.0 31 35.69110365448168 35.0 35.0 40.0 31.0 41.0 32 35.458896599337024 35.0 35.0 40.0 31.0 41.0 33 35.274956723911245 35.0 35.0 40.0 30.0 41.0 34 35.132548187480644 35.0 35.0 40.0 30.0 41.0 35 34.92052276499942 35.0 34.0 40.0 29.0 41.0 36 34.727512424425484 35.0 34.0 40.0 27.0 41.0 37 34.60872831753735 35.0 34.0 40.0 27.0 41.0 38 34.575563350609926 35.0 34.0 40.0 27.0 41.0 39 34.58773751085075 35.0 34.0 40.0 27.0 41.0 40 34.36575122721342 35.0 34.0 40.0 25.0 41.0 41 34.313287916706855 35.0 34.0 40.0 25.0 41.0 42 34.29421394886061 35.0 34.0 40.0 25.0 41.0 43 34.21712413257458 35.0 34.0 40.0 25.0 41.0 44 34.09804864181612 35.0 34.0 40.0 24.0 41.0 45 33.978686335923975 35.0 34.0 40.0 24.0 41.0 46 33.97807717103827 35.0 34.0 39.0 24.0 41.0 47 33.92933941144519 35.0 34.0 39.0 24.0 41.0 48 33.91269905731734 35.0 34.0 39.0 24.0 41.0 49 33.89866998999954 35.0 34.0 39.0 24.0 41.0 50 33.642879116304805 35.0 34.0 39.0 24.0 41.0 >>END_MODULE >>Per sequence quality scores pass #Quality Count 10 2.0 11 1.0 12 0.0 13 11.0 14 18.0 15 46.0 16 86.0 17 313.0 18 724.0 19 1454.0 20 2752.0 21 4307.0 22 6656.0 23 10031.0 24 14557.0 25 21353.0 26 29920.0 27 36560.0 28 38048.0 29 39179.0 30 43415.0 31 52051.0 32 65248.0 33 90476.0 34 198565.0 35 482447.0 36 98856.0 37 113904.0 38 195087.0 39 423843.0 >>END_MODULE >>Per base sequence content fail #Base G A T C 1 32.02212283809921 23.985207446025452 28.627094638841367 15.365575077033977 2 30.70079343726363 25.41811554842607 31.50473879517338 12.376352219136914 3 28.086765385220648 24.77412673675447 34.0072389093918 13.131868968633084 4 25.126020985730314 27.114081353970487 33.459904259585464 14.299993400713737 5 22.86317649029651 31.798508561304832 31.685863821189802 13.652451127208856 6 20.430933392896122 39.91649364691788 29.34707677000472 10.305496190181278 7 85.10180668152351 5.006776959353473 8.231137463132834 1.6602788959901722 8 87.57811270565661 3.0299861414988505 7.795127696189167 1.5967734566553802 9 84.6171144874639 4.036631115127087 9.058637196623195 2.2876172007858226 10 62.43209080617896 15.280444284256642 13.579858978328959 8.707605931235438 11 56.65167444197958 16.288155296434862 17.366834017797768 9.693336243787787 12 48.10072541385139 20.755009112091415 21.098324288926907 10.045941185130285 13 18.651613525491012 49.247275256229976 21.512353356244702 10.588757862034306 14 11.882522551791705 49.40743485743003 28.445868085344 10.264174505434259 15 11.021823332030397 20.13508231340518 58.34058408759791 10.50251026696651 16 11.974404922052278 13.837738779944262 55.264504469747344 18.923351828256113 17 13.260910396921687 13.873171870796128 30.477940616576394 42.387977115705795 18 20.911006086572485 20.11934555385779 39.07315562639918 19.89649273317055 19 32.429806437857565 20.571802772715504 27.16281454482692 19.835576244600006 20 33.335888441603934 20.406668324948857 25.81559563634887 20.441847597098345 21 20.151174419135902 28.24565589290881 30.31295846003117 21.290211227924118 22 21.817900310166454 24.327355056830008 25.120436974278014 28.734307658725527 23 16.465219223213243 31.247874268367593 25.573401830540483 26.713504677878685 24 17.389982283454575 20.98415663659761 45.85981085430299 15.766050225644825 25 13.722251270362607 23.097704971293105 43.42741546568117 19.752628292663115 26 13.236696092714894 36.90970653481631 29.69054423806164 20.163053134407154 27 15.13485387657304 37.25413851394226 31.309856795488116 16.30115081399658 28 11.965927377392877 28.822027402267107 44.48837764161814 14.723667578721871 29 12.378687351198787 23.425587971024058 42.679970150920596 21.515754526856558 30 16.90193968252357 32.04572797742029 33.96500347731622 17.087328862739923 31 33.07557198044581 25.704879918371905 25.203587981176806 16.01596012000548 32 33.41431842063851 25.138965739551555 27.36053931397881 14.086176525831128 33 30.451746526491057 26.208913097552678 24.736104695138355 18.603235680817907 34 18.335304658588463 28.31210562919118 28.796391713327008 24.55619799889335 35 19.910351234320352 24.730419156205105 33.485489184785095 21.87374042468945 36 35.0908924773213 22.461533775654726 26.075353696361763 16.37222005066221 37 19.837505266738074 34.25613352894295 29.551705407861274 16.354655796457706 38 19.609626835743764 35.63167860460631 23.45213740729272 21.306557152357215 39 20.39666786807519 33.18745526445371 27.39500789376164 19.020868973709458 40 25.121401485347043 24.817326679899082 24.366493900736582 25.69477793401729 41 16.33896980065079 22.769568152859776 27.984273393200702 32.90718865328873 42 22.28675421719774 23.921194369285907 24.05815494108868 29.733896472427674 43 21.70474793264667 25.357199059855528 27.06961231731399 25.868440690183814 44 18.015340802371682 31.266301506160183 30.00401033549756 20.714347355970578 45 14.706204851998313 42.68332055779198 21.575960323060446 21.03451426714926 46 21.708047575777574 35.04627114944338 25.376895391160005 17.868785883619047 47 21.363107959246868 27.993309339005336 26.986105964231864 23.65747673751593 48 23.480666629439924 23.457416836302166 32.758958531100404 20.302958003157503 49 21.432552756217287 23.016838332715707 35.224604169733645 20.32600474133336 50 19.80202141214573 36.41953185678533 25.910574594778442 17.86787213629049 >>END_MODULE >>Per sequence GC content fail #GC Content Count 0 3656.0 1 4673.0 2 5690.0 3 14473.5 4 23257.0 5 16963.0 6 10669.0 7 11373.0 8 12077.0 9 12650.5 10 13224.0 11 12530.5 12 11837.0 13 11208.0 14 10579.0 15 9947.0 16 9315.0 17 8560.0 18 7805.0 19 7316.5 20 6828.0 21 7009.0 22 7190.0 23 7546.0 24 7902.0 25 9396.0 26 10890.0 27 12009.5 28 13129.0 29 16266.0 30 19403.0 31 22011.5 32 24620.0 33 26110.5 34 27601.0 35 34063.0 36 40525.0 37 46316.0 38 52107.0 39 76596.5 40 101086.0 41 147051.5 42 193017.0 43 227362.0 44 261707.0 45 250771.0 46 239835.0 47 214426.0 48 189017.0 49 173256.0 50 157495.0 51 143892.5 52 130290.0 53 118166.0 54 106042.0 55 92106.5 56 78171.0 57 69734.0 58 61297.0 59 52357.5 60 43418.0 61 38308.5 62 33199.0 63 27682.0 64 22165.0 65 17558.0 66 12951.0 67 10713.5 68 8476.0 69 6689.0 70 4902.0 71 4164.0 72 3426.0 73 2843.5 74 2261.0 75 1740.5 76 1220.0 77 942.5 78 665.0 79 550.0 80 435.0 81 321.0 82 207.0 83 179.0 84 151.0 85 112.5 86 74.0 87 66.0 88 58.0 89 39.5 90 21.0 91 17.0 92 13.0 93 8.0 94 3.0 95 2.5 96 2.0 97 1.5 98 1.0 99 1.0 100 1.0 >>END_MODULE >>Per base N content pass #Base N-Count 1 0.0 2 0.0 3 0.0 4 0.0 5 0.0 6 0.0 7 0.0 8 0.0 9 0.0 10 0.0 11 0.0 12 0.0 13 0.0 14 0.0 15 0.0 16 0.0 17 0.0 18 0.0 19 0.0 20 0.0 21 0.0 22 0.0 23 0.0 24 0.0 25 0.0 26 0.0 27 0.0 28 0.0 29 0.0 30 0.0 31 0.0 32 0.0 33 0.0 34 0.0 35 0.0 36 0.0 37 0.0 38 0.0 39 0.0 40 0.0 41 0.0 42 0.0 43 0.0 44 0.0 45 0.0 46 0.0 47 0.0 48 0.0 49 0.0 50 0.0 >>END_MODULE >>Sequence Length Distribution pass #Length Count 50 1969910.0 >>END_MODULE >>Sequence Duplication Levels fail #Total Deduplicated Percentage 14.151878995774162 #Duplication Level Percentage of deduplicated Percentage of total 1 80.8162060123464 11.437011683842826 2 7.204313079495722 2.0390913389739316 3 2.3280100514473414 0.9883714964708628 4 1.19925052471467 0.6788659324552273 5 0.6950414089966008 0.49180709585861376 6 0.5215585257168136 0.4428619887095228 7 0.39417962496171904 0.3904867648540522 8 0.30634774632019235 0.3468316989241185 9 0.28621504594150954 0.36454326272407667 >10 3.080475527407266 10.211039599940158 >50 0.9939304633452914 10.165814038774716 >100 2.140048586709557 58.3146038149132 >500 0.03261164456550289 2.83868265055281 >1k 0.0010870548188500965 0.24660340817798046 >5k 3.623516062833655E-4 0.34495760590835406 >10k+ 3.623516062833655E-4 0.6984276189195454 >>END_MODULE >>Overrepresented sequences warn #Sequence Count Percentage Possible Source CGTTTTTTTTTTTTTTTTTTTTTTTTTTTTTTTTTTTTTTTTTTTTTTTT 13620 0.6914021452756725 No Hit GACCAGAAAAATGGTCCTGCCAAGCGGCTACAGTGTTCTTCTTTCAGATA 6727 0.34148768217837366 No Hit AAAAAAAAAAAAAAAAAAAAAAAAAAAAAAAAAAAAAAAAAAAAAAAAAA 2508 0.1273154611124366 No Hit >>END_MODULE >>Adapter Content pass #Position Illumina Universal Adapter Illumina Small RNA 3' Adapter Illumina Small RNA 5' Adapter Nextera Transposase Sequence SOLID Small RNA Adapter 1 0.0 0.0 0.0 0.04436750917554609 0.0 2 0.0 0.0 0.0 0.14371214928600798 0.0 3 0.0 0.0 0.0 0.19924768136615378 0.0 4 0.0 0.0 0.0 0.2730073962769873 0.0 5 0.0 0.0 0.0 0.4381418440436365 0.0 6 0.0 0.0 0.0 0.5825646856963008 0.0 7 0.0 0.0 0.0 0.680589468554401 0.0 8 0.0 0.0 0.0 0.8879593483966273 0.0 9 0.0 0.0 0.0 0.9850703839261692 0.0 10 0.0 0.0 0.0 1.1492910843642603 0.0 11 0.0 0.0 0.0 1.3080293008310024 0.0 12 0.0 0.0 0.0 1.446309729886137 0.0 13 0.0 0.0 0.0 1.4997131848663137 0.0 14 0.0 0.0 0.0 1.5203232634993478 0.0 15 0.0 0.0 0.0 1.555096425725033 0.0 16 0.0 0.0 0.0 1.637282921554792 0.0 17 0.0 0.0 0.0 1.73677985288668 0.0 18 0.0 0.0 0.0 1.9018127731723784 0.0 19 0.0 0.0 0.0 1.9598357285358214 0.0 20 0.0 0.0 0.0 2.033240097263327 0.0 21 0.0 0.0 0.0 2.1174571427121034 0.0 22 0.0 0.0 0.0 2.195684066784777 0.0 23 0.0 0.0 0.0 2.2978714763618644 0.0 24 0.0 0.0 0.0 2.36513343249184 0.0 25 0.0 0.0 0.0 2.416912447776802 0.0 26 0.0 0.0 0.0 2.4748846393997694 0.0 27 0.0 0.0 0.0 2.52534379743237 0.0 28 0.0 0.0 0.0 2.595143940586118 0.0 29 0.0 0.0 0.0 2.658497088699484 0.0 30 0.0 0.0 0.0 2.7450492662101316 0.0 31 0.0 0.0 0.0 2.8304846414303193 0.0 32 0.0 0.0 0.0 2.89891416359123 0.0 33 0.0 0.0 0.0 2.9659730647593037 0.0 34 0.0 0.0 0.0 3.037549938829693 0.0 35 0.0 0.0 0.0 3.1417171342853227 0.0 36 0.0 0.0 0.0 3.217710453777076 0.0 37 0.0 0.0 0.0 3.2945667568569124 0.0 38 0.0 0.0 0.0 3.370915422531994 0.0 >>END_MODULE >>Kmer Content warn #Sequence Count PValue Obs/Exp Max Max Obs/Exp Position CCCTGAT 20 7.857852E-4 44.0 20 AACGTAC 20 7.857852E-4 44.0 42 TAATACG 60 0.0 44.0 1 GTACCGA 25 4.4440014E-5 44.0 9 ACACGTA 40 8.3182385E-9 44.0 19 TACCCGT 20 7.857852E-4 44.0 13 CTATCGA 25 4.4440014E-5 44.0 19 CTATCCG 25 4.4440014E-5 44.0 1 GCGAACC 30 2.5286408E-6 44.0 9 TCACACG 25 4.4440014E-5 44.0 44 GACCGTT 25 4.4440014E-5 44.0 33 CTATACG 30 2.5286408E-6 44.0 1 CGACCGT 20 7.857852E-4 44.0 17 GTTAGCG 40 8.3182385E-9 44.0 1 CGTCTAT 20 7.857852E-4 44.0 30 ACTTACG 50 2.7284841E-11 44.0 1 CCGTCTA 25 4.4440014E-5 44.0 38 AATATCG 20 7.857852E-4 44.0 41 ATATCGT 20 7.857852E-4 44.0 42 CCACTAG 30 2.5286408E-6 44.0 31 >>END_MODULE