##FastQC 0.11.5 >>Basic Statistics pass #Measure Value Filename SRR1545892_1.fastq.gz File type Conventional base calls Encoding Illumina 1.5 Total Sequences 1632027 Sequences flagged as poor quality 0 Sequence length 50 %GC 44 >>END_MODULE >>Per base sequence quality pass #Base Mean Median Lower Quartile Upper Quartile 10th Percentile 90th Percentile 1 31.581385602076438 31.0 31.0 33.0 30.0 34.0 2 31.981083033552753 31.0 31.0 34.0 30.0 34.0 3 31.998640953856768 33.0 31.0 34.0 30.0 34.0 4 35.75989858010927 37.0 35.0 37.0 35.0 37.0 5 35.692059016180494 37.0 35.0 37.0 33.0 37.0 6 35.74293011083763 37.0 35.0 37.0 33.0 37.0 7 36.052703172190164 37.0 35.0 37.0 35.0 37.0 8 36.04376643278573 37.0 35.0 37.0 35.0 37.0 9 37.839295550870176 39.0 38.0 39.0 35.0 39.0 10 37.38321486102865 39.0 37.0 39.0 35.0 39.0 11 37.11547174158271 39.0 37.0 39.0 33.0 39.0 12 36.294335204013166 38.0 35.0 39.0 33.0 39.0 13 35.92929344918926 38.0 35.0 39.0 32.0 39.0 14 36.93934230254769 39.0 35.0 41.0 32.0 41.0 15 37.16460818356559 39.0 35.0 41.0 32.0 41.0 16 37.32840694424786 39.0 35.0 41.0 33.0 41.0 17 37.268283551681435 39.0 35.0 41.0 33.0 41.0 18 37.12104456605191 38.0 35.0 40.0 32.0 41.0 19 36.96034563153673 38.0 35.0 40.0 32.0 41.0 20 36.714303133465314 38.0 35.0 40.0 32.0 41.0 21 36.55894847327893 37.0 35.0 40.0 32.0 41.0 22 36.46140229297677 37.0 35.0 40.0 32.0 41.0 23 36.396994044828915 37.0 35.0 40.0 32.0 41.0 24 36.42798311547542 37.0 35.0 40.0 32.0 41.0 25 36.40498165777895 37.0 35.0 40.0 32.0 41.0 26 36.167429215325484 37.0 35.0 40.0 31.0 41.0 27 36.14031936971631 37.0 35.0 40.0 31.0 41.0 28 36.14198049419525 37.0 35.0 40.0 31.0 41.0 29 36.12930913520426 37.0 35.0 40.0 31.0 41.0 30 36.0163067155139 36.0 35.0 40.0 31.0 41.0 31 35.79413882245821 36.0 35.0 40.0 30.0 41.0 32 35.50392119738215 37.0 35.0 40.0 30.0 41.0 33 35.166841602497996 36.0 34.0 40.0 27.0 41.0 34 34.84831623496425 36.0 34.0 40.0 25.0 41.0 35 34.56060959775788 36.0 34.0 40.0 23.0 41.0 36 34.34970806242789 36.0 34.0 40.0 23.0 41.0 37 34.263518924625636 36.0 34.0 40.0 23.0 41.0 38 34.18760290117749 36.0 33.0 40.0 23.0 41.0 39 34.10802946274786 36.0 33.0 40.0 22.0 41.0 40 33.927854747501115 36.0 33.0 40.0 21.0 41.0 41 33.92817153147589 36.0 33.0 40.0 21.0 41.0 42 33.90840041249317 36.0 33.0 40.0 21.0 41.0 43 33.78556849856038 35.0 33.0 40.0 20.0 41.0 44 33.62819916582262 35.0 33.0 40.0 19.0 41.0 45 33.54454613802345 35.0 33.0 40.0 20.0 41.0 46 33.52389022975723 35.0 33.0 40.0 20.0 41.0 47 33.48599624883657 35.0 33.0 40.0 20.0 41.0 48 33.41139147820471 35.0 33.0 40.0 20.0 41.0 49 33.36844794847144 35.0 33.0 40.0 19.0 41.0 50 33.167138778954026 35.0 33.0 40.0 18.0 41.0 >>END_MODULE >>Per sequence quality scores pass #Quality Count 11 1.0 12 4.0 13 2.0 14 9.0 15 27.0 16 86.0 17 242.0 18 627.0 19 1238.0 20 2319.0 21 3842.0 22 5917.0 23 9010.0 24 13846.0 25 21591.0 26 33056.0 27 41400.0 28 42314.0 29 41324.0 30 43046.0 31 49163.0 32 59518.0 33 77642.0 34 141732.0 35 252273.0 36 103514.0 37 125061.0 38 197202.0 39 366021.0 >>END_MODULE >>Per base sequence content fail #Base G A T C 1 30.699247010006577 21.65013201374732 28.985917512394092 18.66470346385201 2 33.879035089493 24.34175414990071 29.13444446691139 12.644766293694895 3 26.610466616054758 23.533434189507894 37.08970501100779 12.766394183429563 4 24.756453171424248 26.31365780100452 35.053831829988106 13.876057197583128 5 22.30894464368543 30.32082189816713 34.20317188379849 13.167061574348955 6 19.52461570795091 39.85742882930246 30.706906197017574 9.911049265729059 7 83.1557321049223 3.6218763537613046 11.66218451042783 1.560207030888582 8 84.44412990716452 2.575508861066637 11.161825141373274 1.8185360903955634 9 79.774109129322 5.437716410328996 12.663822350978263 2.1243521093707396 10 44.49981526040929 30.73913605595986 15.974551891604735 8.786496792026112 11 43.04536628376859 18.292528248613536 26.1764664432635 12.485639024354377 12 38.6762596452142 19.78551825429359 28.021350136976903 13.516871963515309 13 21.04793609419452 35.7014926836382 29.16508121495539 14.08549000721189 14 14.275192751100318 39.05339801363581 32.11117218036221 14.560237054901664 15 14.183037412983976 21.767286938267567 49.9839157072769 14.065759941471557 16 16.052369231636487 17.650627103595713 48.471134362360424 17.825869302407373 17 17.008235770609186 18.03646630846181 32.88983576864843 32.065462152280574 18 20.247704235285326 21.93701452243131 37.68516084599091 20.130120396292465 19 27.399730519164205 21.661896524996216 31.883602415891403 19.054770539948173 20 29.394856825285366 21.57991258723048 29.589032534388217 19.436198053095936 21 22.306432430345822 25.574883258671576 32.33586209051688 19.782822220465714 22 21.26055512561986 22.187806941919465 30.813460806714595 25.73817712574608 23 18.628797195144443 27.240603249823685 30.915236083716753 23.215363471315122 24 18.761454314174948 21.854540396696866 42.19250049171981 17.191504797408378 25 16.81301841207284 23.59446259161154 38.784468639305594 20.808050357010025 26 16.99040518324758 32.02183542306592 31.73378871795626 19.25397067573024 27 17.63916895982726 31.315597107155703 33.511210292476775 17.534023640540262 28 15.397110464471483 26.098097641766955 42.18514767218925 16.319644221572315 29 16.52717755282235 22.45734905121055 40.68400829152949 20.33146510443761 30 18.033463907153497 27.75818047127897 35.49953524053217 18.708820381035363 31 26.71144533760777 23.805856153115116 30.310282856839994 19.17241565243712 32 27.995921636100384 24.83218721258901 30.966215632461964 16.205675518848647 33 26.57627600523766 25.881434559599807 29.291120796408393 18.25116863875414 34 19.679576379557446 26.460898012103968 31.756705005493167 22.10282060284542 35 19.938885815001836 25.377643874764328 33.13860616276569 21.54486414746815 36 27.593293493306177 24.230297660516644 29.919296678302505 18.257112167874674 37 20.01872518040449 31.130612422466047 30.71481047801293 18.135851919116533 38 20.275461129013184 31.085331308857022 27.425833028497692 21.213374533632106 39 20.573127773008657 28.948173038803894 29.9534872891196 20.52521189906785 40 22.902807367770265 24.806819985208577 29.318387502167546 22.97198514485361 41 17.00106677156689 24.947994120195315 29.77230156118741 28.278637547050383 42 21.78946794385142 25.333526957580972 27.476016021793757 25.40098907677385 43 22.85342092992334 26.07959304594838 27.81700302752344 23.249982996604835 44 19.763521069198 30.17535861845423 29.513972501680424 20.547147810667347 45 17.654854974825785 35.105485387190285 25.70882712111993 21.530832516864 46 20.729375188033043 30.925223663579093 28.77679107024577 19.56861007814209 47 21.0766120903637 26.347603317837265 29.75061074357226 22.825173848226775 48 22.517642171361135 23.337787916498932 32.438495196464274 21.706074715675662 49 21.120177546082264 23.16040114532419 33.361948056006426 22.35747325258712 50 18.637130390612413 31.159165871643058 29.078746858967406 21.12495687877713 >>END_MODULE >>Per sequence GC content fail #GC Content Count 0 593.0 1 1511.5 2 2430.0 3 19178.0 4 35926.0 5 25812.5 6 15699.0 7 15793.5 8 15888.0 9 16463.0 10 17038.0 11 16761.0 12 16484.0 13 15126.5 14 13769.0 15 12708.5 16 11648.0 17 10520.0 18 9392.0 19 8666.0 20 7940.0 21 7715.0 22 7490.0 23 8407.0 24 9324.0 25 9882.5 26 10441.0 27 12317.0 28 14193.0 29 17741.5 30 21290.0 31 25337.0 32 29384.0 33 32560.0 34 35736.0 35 39029.5 36 42323.0 37 46048.5 38 49774.0 39 62882.0 40 75990.0 41 102424.5 42 128859.0 43 144598.5 44 160338.0 45 165653.0 46 170968.0 47 155333.5 48 139699.0 49 128468.0 50 117237.0 51 108558.0 52 99879.0 53 90548.5 54 81218.0 55 72108.0 56 62998.0 57 58836.0 58 54674.0 59 54758.0 60 54842.0 61 47443.0 62 40044.0 63 34166.5 64 28289.0 65 24545.5 66 20802.0 67 15829.5 68 10857.0 69 8783.5 70 6710.0 71 5752.0 72 4794.0 73 4099.5 74 3405.0 75 2546.0 76 1687.0 77 1267.0 78 847.0 79 738.5 80 630.0 81 420.0 82 210.0 83 141.0 84 72.0 85 59.5 86 47.0 87 77.0 88 107.0 89 73.5 90 40.0 91 30.0 92 20.0 93 10.5 94 1.0 95 1.0 96 1.0 97 0.5 98 0.0 99 0.0 100 0.0 >>END_MODULE >>Per base N content pass #Base N-Count 1 0.0 2 0.0 3 0.0 4 0.0 5 0.0 6 0.0 7 0.0 8 0.0 9 0.0 10 0.0 11 0.0 12 0.0 13 0.0 14 0.0 15 0.0 16 0.0 17 0.0 18 0.0 19 0.0 20 0.0 21 0.0 22 0.0 23 0.0 24 0.0 25 0.0 26 0.0 27 0.0 28 0.0 29 0.0 30 0.0 31 0.0 32 0.0 33 0.0 34 0.0 35 0.0 36 0.0 37 0.0 38 0.0 39 0.0 40 0.0 41 0.0 42 0.0 43 0.0 44 0.0 45 0.0 46 0.0 47 0.0 48 0.0 49 0.0 50 0.0 >>END_MODULE >>Sequence Length Distribution pass #Length Count 50 1632027.0 >>END_MODULE >>Sequence Duplication Levels fail #Total Deduplicated Percentage 18.577457499184064 #Duplication Level Percentage of deduplicated Percentage of total 1 80.23422609300253 14.905479252226797 2 8.030031794286462 2.9835514875090703 3 2.652341496597831 1.4782128427910541 4 1.290753763847128 0.9591569275912754 5 0.7504221890513602 0.6970468161773156 6 0.5212972226422837 0.5810626198847831 7 0.3940142828337804 0.5123848515391232 8 0.2911405221316914 0.43269205409534034 9 0.2673893297466727 0.44706725181937124 >10 2.9568948907459847 13.160913247602114 >50 1.1635543002069537 15.714050494573126 >100 1.4399234144098372 45.74344250914665 >500 0.007009362935235579 0.8539078532551649 >1k 6.675583747843409E-4 0.27010548317329885 >5k 0.0 0.0 >10k+ 3.3377918739217044E-4 1.2609263086154803 >>END_MODULE >>Overrepresented sequences fail #Sequence Count Percentage Possible Source CGTTTTTTTTTTTTTTTTTTTTTTTTTTTTTTTTTTTTTTTTTTTTTTTT 20335 1.2459965429493507 No Hit GACCAGAAAAATGGTCCTGCCAAGCGGCTACAGTGTTCTTCTTTCAGATA 3245 0.19883249480553938 No Hit >>END_MODULE >>Adapter Content warn #Position Illumina Universal Adapter Illumina Small RNA 3' Adapter Illumina Small RNA 5' Adapter Nextera Transposase Sequence SOLID Small RNA Adapter 1 0.0 0.0 0.0 0.07211890489556852 0.0 2 0.0 0.0 0.0 0.24276559150063082 0.0 3 0.0 0.0 0.0 0.3341243741678293 0.0 4 0.0 0.0 0.0 0.48265132868512595 0.0 5 0.0 0.0 0.0 0.7882835271720382 0.0 6 0.0 0.0 0.0 1.0836830518122555 0.0 7 0.0 0.0 0.0 1.2665844376349167 0.0 8 0.0 0.0 0.0 1.7875317013750385 0.0 9 0.0 0.0 0.0 1.9964130495390089 0.0 10 0.0 0.0 0.0 2.3928525692283276 0.0 11 0.0 0.0 0.0 2.6882520938685452 0.0 12 0.0 0.0 0.0 3.0014822058703685 0.0 13 0.0 0.0 0.0 3.1190660448632284 0.0 14 0.0 0.0 0.0 3.158832543824336 0.0 15 0.0 0.0 0.0 3.2232922617089055 0.0 16 0.0 0.0 0.0 3.3773338308741216 0.0 17 0.0 0.0 0.0 3.577146701617069 0.0 18 0.0 0.0 0.0 3.8795926783074055 0.0 19 0.0 0.0 0.0 4.002629858452097 0.0 20 0.0 0.0 0.0 4.131610567717323 0.0 21 0.0 0.0 0.0 4.295884810729234 0.0 22 0.0 0.0 0.0 4.467205505791265 0.0 23 0.0 0.0 0.0 4.6535382073948535 0.0 24 0.0 0.0 0.0 4.789565368710199 0.0 25 0.0 0.0 0.0 4.906291378757827 0.0 26 0.0 0.0 0.0 5.0271839865394385 0.0 27 0.0 0.0 0.0 5.138211561450883 0.0 28 6.127349608799364E-5 0.0 0.0 5.255182665482863 0.0 29 6.127349608799364E-5 0.0 0.0 5.389800536388185 0.0 30 6.127349608799364E-5 0.0 0.0 5.560998684458039 0.0 31 6.127349608799364E-5 0.0 0.0 5.726069482919094 0.0 32 6.127349608799364E-5 0.0 0.0 5.8717165831202545 0.0 33 6.127349608799364E-5 0.0 0.0 6.006395727521665 0.0 34 6.127349608799364E-5 0.0 0.0 6.150265896336274 0.0 35 6.127349608799364E-5 0.0 0.0 6.332432000205879 0.0 36 6.127349608799364E-5 0.0 0.0 6.494622944350798 0.0 37 6.127349608799364E-5 0.0 0.0 6.6565075210152775 0.0 38 6.127349608799364E-5 0.0 0.0 6.812019654086606 0.0 >>END_MODULE >>Kmer Content fail #Sequence Count PValue Obs/Exp Max Max Obs/Exp Position CGAAAGG 215 0.0 44.0 2 ACCGCAA 20 7.8574545E-4 44.0 29 CGGCATA 25 4.4436638E-5 44.0 19 CGTGACC 20 7.8574545E-4 44.0 30 CGCATGT 30 2.5283734E-6 44.0 35 TAGCGAT 20 7.8574545E-4 44.0 30 CAACCCG 50 2.7284841E-11 44.0 13 ATTAACG 45 4.802132E-10 44.0 1 TAAGTCG 25 4.4436638E-5 44.0 2 TACGCGC 20 7.8574545E-4 44.0 11 TCGGAAT 30 2.5283734E-6 44.0 23 TACGATA 20 7.8574545E-4 44.0 33 TAATTCG 40 8.3164196E-9 44.0 36 CTACGCC 20 7.8574545E-4 44.0 42 CTACCGT 30 2.5283734E-6 44.0 22 ACGTCAA 20 7.8574545E-4 44.0 10 CGTAATC 40 8.3164196E-9 44.0 34 TTAGTCG 25 4.4436638E-5 44.0 38 CTCGAAT 25 4.4436638E-5 44.0 10 ACGTATA 20 7.8574545E-4 44.0 25 >>END_MODULE