##FastQC 0.11.5 >>Basic Statistics pass #Measure Value Filename SRR1545891_1.fastq.gz File type Conventional base calls Encoding Illumina 1.5 Total Sequences 2761857 Sequences flagged as poor quality 0 Sequence length 50 %GC 43 >>END_MODULE >>Per base sequence quality pass #Base Mean Median Lower Quartile Upper Quartile 10th Percentile 90th Percentile 1 31.5481308409523 31.0 31.0 33.0 30.0 34.0 2 31.945353796376857 31.0 31.0 34.0 30.0 34.0 3 31.963678785686586 33.0 31.0 34.0 30.0 34.0 4 35.726491994335696 37.0 35.0 37.0 33.0 37.0 5 35.66529983268504 37.0 35.0 37.0 33.0 37.0 6 35.71696398473925 37.0 35.0 37.0 33.0 37.0 7 36.028914603471506 37.0 35.0 37.0 35.0 37.0 8 36.03101645016378 37.0 35.0 37.0 35.0 37.0 9 37.80927289139155 39.0 38.0 39.0 35.0 39.0 10 37.33069923605748 39.0 37.0 39.0 34.0 39.0 11 37.05605757285768 39.0 37.0 39.0 33.0 39.0 12 36.435837554225294 38.0 35.0 39.0 33.0 39.0 13 36.16097357683616 38.0 35.0 39.0 32.0 39.0 14 37.23414934227225 39.0 35.0 41.0 32.0 41.0 15 37.39070451511429 39.0 35.0 41.0 32.0 41.0 16 37.524582554419 39.0 35.0 41.0 33.0 41.0 17 37.448170560604694 39.0 35.0 41.0 33.0 41.0 18 37.29725000244401 39.0 35.0 41.0 32.0 41.0 19 37.143330737253955 38.0 35.0 41.0 32.0 41.0 20 36.88330713719066 38.0 35.0 41.0 32.0 41.0 21 36.752049074227955 38.0 35.0 41.0 32.0 41.0 22 36.65172563242775 38.0 35.0 41.0 32.0 41.0 23 36.59592368468027 38.0 35.0 40.0 32.0 41.0 24 36.63724189920043 38.0 35.0 41.0 32.0 41.0 25 36.606220742058696 38.0 35.0 41.0 32.0 41.0 26 36.36087567169481 38.0 35.0 40.0 31.0 41.0 27 36.33346802531775 38.0 35.0 40.0 31.0 41.0 28 36.31745959330986 38.0 35.0 40.0 31.0 41.0 29 36.2792588464935 38.0 35.0 40.0 31.0 41.0 30 36.16118647706959 38.0 35.0 40.0 31.0 41.0 31 35.955675836945936 38.0 35.0 40.0 30.0 41.0 32 35.678432301165486 38.0 35.0 40.0 29.0 41.0 33 35.35316129691002 38.0 35.0 40.0 27.0 41.0 34 35.01887498157942 38.0 34.0 40.0 25.0 41.0 35 34.72601296881048 37.0 34.0 40.0 23.0 41.0 36 34.532285342796534 37.0 34.0 40.0 23.0 41.0 37 34.43428244112566 37.0 34.0 40.0 22.0 41.0 38 34.35444231906286 37.0 34.0 40.0 23.0 41.0 39 34.2356483337117 37.0 34.0 40.0 22.0 41.0 40 34.09437092506962 37.0 33.0 40.0 21.0 41.0 41 34.057644910652506 37.0 33.0 40.0 20.0 41.0 42 34.04266766889089 37.0 33.0 40.0 20.0 41.0 43 33.94319184519691 37.0 33.0 40.0 20.0 41.0 44 33.81392736843363 36.0 33.0 40.0 18.0 41.0 45 33.73197888232446 36.0 33.0 40.0 20.0 41.0 46 33.67078491029767 36.0 33.0 40.0 20.0 41.0 47 33.63676902895407 36.0 33.0 40.0 20.0 41.0 48 33.5373055158178 36.0 33.0 40.0 19.0 41.0 49 33.4613750820553 36.0 33.0 40.0 18.0 41.0 50 33.31312844944543 35.0 33.0 40.0 18.0 41.0 >>END_MODULE >>Per sequence quality scores pass #Quality Count 8 1.0 9 2.0 10 0.0 11 8.0 12 4.0 13 6.0 14 16.0 15 55.0 16 188.0 17 502.0 18 1172.0 19 2417.0 20 4162.0 21 6847.0 22 10734.0 23 16008.0 24 23933.0 25 37001.0 26 55937.0 27 70151.0 28 72067.0 29 69537.0 30 73039.0 31 81365.0 32 97141.0 33 124948.0 34 217929.0 35 359175.0 36 177755.0 37 223581.0 38 354412.0 39 681764.0 >>END_MODULE >>Per base sequence content fail #Base G A T C 1 30.4116034972122 22.25086237267172 28.435686568855665 18.901847561260414 2 33.64283523730591 24.50662724391596 29.787349598476677 12.063187920301448 3 27.19210299447075 23.14880893543728 36.66902377639393 12.990064293698044 4 23.95120384581823 26.111417064677862 36.12580231344346 13.811576776060456 5 22.046760567256015 30.85652153605346 34.20575359260092 12.890964304089604 6 20.8692195142616 38.5413147748055 31.02789174095545 9.561573969977447 7 83.199347395611 3.798350168021009 11.574096703775757 1.428205732592238 8 84.99857161322979 2.47826009818756 11.139606431469842 1.3835618571128048 9 79.84421351286471 5.365628995273832 12.64142205769524 2.148735434166215 10 39.9355578511125 34.936964513369084 16.626023722444717 8.501453913073703 11 37.77465668932171 19.68541455984144 28.676104519531602 13.86382423130524 12 35.1770203888181 19.999551026718617 30.194937681422317 14.62849090304096 13 21.544562227515762 32.60186895990632 30.66777172025923 15.185797092318682 14 15.296374866620537 35.28756195559727 33.459516549915506 15.956546627866686 15 14.857901766818484 23.051446906918063 47.01905276051584 15.07159856574761 16 17.73744983900325 19.878509278358727 44.2400529788472 18.14398790379082 17 16.92509785988196 20.727430855399103 33.033752290578406 29.313718994140537 18 20.39508200460777 23.413015228521967 37.14508028475044 19.046822482119822 19 25.686087295613056 23.139829469809627 31.54337824152373 19.630704993053584 20 27.042312473093283 22.38866820403808 31.843067906846734 18.725951416021903 21 21.96134702122521 24.46067989761961 33.72499010629442 19.852982974860755 22 21.455093438943436 22.59537695108762 31.734228093634105 24.21530151633484 23 19.036105055402942 26.060979985567684 31.63208667211952 23.270828286909857 24 18.87719023830705 22.30901165411533 40.80663843204047 18.00715967553715 25 17.355134606896737 24.832748400804242 37.12389888397553 20.688218108323493 26 17.692805963523817 29.586977167898265 32.828745297095395 19.891471571482523 27 17.37950226966856 29.452212768438045 34.40779156922317 18.76049339267022 28 15.478607328330177 26.334491611984255 40.47273265777338 17.714168401912193 29 16.897073237318224 22.897601142999076 39.75524438810554 20.450081231577162 30 18.945043135832158 26.648519456293357 35.39922595557989 19.007211452294598 31 24.63585189240428 25.75911786888315 30.702567149566395 18.902463089146178 32 25.355512613433646 25.186025199711644 32.14963700148125 17.308825185373465 33 24.73067939433504 26.01818269374555 29.99481870350275 19.256319208416656 34 18.94203791144871 26.12133792589551 33.2623665888567 21.67425757379908 35 19.9345223159635 25.311085983090365 33.3330436731518 21.421348027794345 36 25.725770740483668 24.92862592089308 30.79355665409179 18.552046684531458 37 20.11259091256354 29.715839741159662 31.39119802364858 18.780371322628216 38 20.48900431847123 29.815338013517717 28.59282721733964 21.102830450671416 39 21.16213837284117 29.430922745095057 29.82109500962577 19.585843872437998 40 22.26979890703972 25.704516924663366 29.88463921195051 22.141044956346402 41 18.04926902442813 25.81201705953639 30.467652742339663 25.671061173695815 42 21.507702969415142 25.53502951094137 28.720712187488346 24.23655533215514 43 21.71267375537546 25.993127088042574 29.106068851501 23.188130305080964 44 19.68476282443298 28.810470636242208 30.297151517982286 21.207615021342523 45 18.42213409311199 32.68210483019215 27.452471290150072 21.44328978654579 46 20.661388334008603 30.826288254605505 29.241086703620063 19.271236707765826 47 21.213118564791735 26.616982704028487 30.986035844723315 21.183862886456467 48 22.161429791622087 24.288911409968 32.37658575371571 21.173073044694206 49 20.25673306040103 24.24473823228357 33.73328162899093 21.765247078324474 50 19.24060514356826 29.99677390972813 30.346574786457083 20.41604616024653 >>END_MODULE >>Per sequence GC content fail #GC Content Count 0 981.0 1 2636.0 2 4291.0 3 35376.5 4 66462.0 5 47799.5 6 29137.0 7 28435.5 8 27734.0 9 27886.5 10 28039.0 11 27123.5 12 26208.0 13 24602.5 14 22997.0 15 21037.5 16 19078.0 17 17790.0 18 16502.0 19 16057.5 20 15613.0 21 15391.5 22 15170.0 23 16205.5 24 17241.0 25 18748.5 26 20256.0 27 25471.0 28 30686.0 29 38303.0 30 45920.0 31 51498.0 32 57076.0 33 63339.0 34 69602.0 35 80033.0 36 90464.0 37 92395.0 38 94326.0 39 110589.5 40 126853.0 41 165283.5 42 203714.0 43 233123.5 44 262533.0 45 259844.0 46 257155.0 47 241112.5 48 225070.0 49 209351.0 50 193632.0 51 180653.0 52 167674.0 53 151357.0 54 135040.0 55 120805.0 56 106570.0 57 100071.5 58 93573.0 59 91508.0 60 89443.0 61 80110.5 62 70778.0 63 58600.5 64 46423.0 65 38458.0 66 30493.0 67 25987.0 68 21481.0 69 16954.5 70 12428.0 71 10911.5 72 9395.0 73 7290.5 74 5186.0 75 4064.0 76 2942.0 77 2360.0 78 1778.0 79 1464.5 80 1151.0 81 749.0 82 347.0 83 290.5 84 234.0 85 167.5 86 101.0 87 75.0 88 49.0 89 30.5 90 12.0 91 11.5 92 11.0 93 6.0 94 1.0 95 3.5 96 6.0 97 3.5 98 1.0 99 0.5 100 0.0 >>END_MODULE >>Per base N content pass #Base N-Count 1 0.0 2 0.0 3 0.0 4 0.0 5 0.0 6 0.0 7 0.0 8 0.0 9 0.0 10 0.0 11 0.0 12 0.0 13 0.0 14 0.0 15 0.0 16 0.0 17 0.0 18 0.0 19 0.0 20 0.0 21 0.0 22 0.0 23 0.0 24 0.0 25 0.0 26 0.0 27 0.0 28 0.0 29 0.0 30 0.0 31 0.0 32 0.0 33 0.0 34 0.0 35 0.0 36 0.0 37 0.0 38 0.0 39 0.0 40 0.0 41 0.0 42 0.0 43 0.0 44 0.0 45 0.0 46 0.0 47 0.0 48 0.0 49 0.0 50 0.0 >>END_MODULE >>Sequence Length Distribution pass #Length Count 50 2761857.0 >>END_MODULE >>Sequence Duplication Levels fail #Total Deduplicated Percentage 17.538344723125164 #Duplication Level Percentage of deduplicated Percentage of total 1 79.78608270077181 13.99315822513909 2 8.528007606439111 2.991342744063253 3 2.8899355639884545 1.5205405844654596 4 1.4258040256649502 1.0002497003892596 5 0.827659711907198 0.725789067043545 6 0.53391922859583 0.5618435691251238 7 0.4079020997501797 0.5007749347093667 8 0.31719853905649664 0.4450509858915615 9 0.25836394456555895 0.4078148331435455 >10 2.606111519491387 10.579237594338696 >50 0.9485537465166493 12.112654908608034 >100 1.456211439080783 51.85742719245858 >500 0.01215430444056243 1.3792967445031221 >1k 0.0016764557849051629 0.357751992085944 >5k 2.0955697311314536E-4 0.23808479604815544 >10k+ 2.0955697311314536E-4 1.3289821279872338 >>END_MODULE >>Overrepresented sequences fail #Sequence Count Percentage Possible Source CGTTTTTTTTTTTTTTTTTTTTTTTTTTTTTTTTTTTTTTTTTTTTTTTT 36160 1.3092640205484931 No Hit GACCAGAAAAATGGTCCTGCCAAGCGGCTACAGTGTTCTTCTTTCAGATA 6478 0.23455233199981027 No Hit >>END_MODULE >>Adapter Content warn #Position Illumina Universal Adapter Illumina Small RNA 3' Adapter Illumina Small RNA 5' Adapter Nextera Transposase Sequence SOLID Small RNA Adapter 1 3.6207522692159656E-5 0.0 0.0 0.043376612185207275 0.0 2 3.6207522692159656E-5 0.0 0.0 0.1753892399208214 0.0 3 3.6207522692159656E-5 0.0 0.0 0.2489629260312898 0.0 4 3.6207522692159656E-5 0.0 0.0 0.3565716834723883 0.0 5 3.6207522692159656E-5 0.0 0.0 0.5848239065237628 0.0 6 3.6207522692159656E-5 0.0 0.0 0.77875139806297 0.0 7 3.6207522692159656E-5 0.0 0.0 0.9107640257985841 0.0 8 3.6207522692159656E-5 0.0 0.0 1.2609993927998444 0.0 9 3.6207522692159656E-5 0.0 0.0 1.4230642643699511 0.0 10 3.6207522692159656E-5 0.0 0.0 1.742776689741721 0.0 11 3.6207522692159656E-5 0.0 0.0 2.0361300385935985 0.0 12 3.6207522692159656E-5 0.0 0.0 2.3159779814813004 0.0 13 3.6207522692159656E-5 0.0 0.0 2.4246005495577796 0.0 14 3.6207522692159656E-5 0.0 0.0 2.4617856753626275 0.0 15 3.6207522692159656E-5 0.0 0.0 2.527683366662358 0.0 16 3.6207522692159656E-5 0.0 0.0 2.6696168556156237 0.0 17 3.6207522692159656E-5 0.0 0.0 2.862892611746372 0.0 18 3.6207522692159656E-5 0.0 0.0 3.1402060280456228 0.0 19 3.6207522692159656E-5 0.0 0.0 3.26019775824744 0.0 20 3.6207522692159656E-5 0.0 0.0 3.4047743963572334 0.0 21 3.6207522692159656E-5 0.0 0.0 3.5695910396519444 0.0 22 3.6207522692159656E-5 0.0 0.0 3.7553718385854156 0.0 23 3.6207522692159656E-5 0.0 0.0 3.94690963362694 0.0 24 3.6207522692159656E-5 0.0 0.0 4.088734500012129 0.0 25 3.6207522692159656E-5 0.0 0.0 4.207857249669335 0.0 26 3.6207522692159656E-5 0.0 0.0 4.3238299448523225 0.0 27 3.6207522692159656E-5 0.0 0.0 4.439006074536082 0.0 28 3.6207522692159656E-5 0.0 0.0 4.563270292415574 0.0 29 3.6207522692159656E-5 0.0 0.0 4.699048502511173 0.0 30 3.6207522692159656E-5 0.0 0.0 4.874256704818533 0.0 31 3.6207522692159656E-5 0.0 0.0 5.028138676260212 0.0 32 3.6207522692159656E-5 0.0 0.0 5.178001612683061 0.0 33 3.6207522692159656E-5 0.0 0.0 5.31982647906825 0.0 34 3.6207522692159656E-5 0.0 0.0 5.475373996553768 0.0 35 3.6207522692159656E-5 0.0 0.0 5.656158157355721 0.0 36 3.6207522692159656E-5 0.0 0.0 5.822567931648887 0.0 37 3.6207522692159656E-5 3.6207522692159656E-5 0.0 5.982279314244003 0.0 38 3.6207522692159656E-5 3.6207522692159656E-5 0.0 6.145321788926799 0.0 >>END_MODULE >>Kmer Content fail #Sequence Count PValue Obs/Exp Max Max Obs/Exp Position ACACGCT 30 2.5290137E-6 44.0 44 GTCGATA 35 1.4470788E-7 44.0 27 CTATCGA 20 7.858404E-4 44.0 31 TAAGTCG 50 2.7284841E-11 44.0 1 TTAACGC 25 4.4444685E-5 44.0 13 CTACCGA 35 1.4470788E-7 44.0 12 ACGTAAC 20 7.858404E-4 44.0 16 GTACGTC 30 2.5290137E-6 44.0 25 CCGGATA 95 0.0 43.999996 20 CGTTTTT 24035 0.0 42.846684 1 CGGTCTA 340 0.0 42.058826 31 GCTACGA 200 0.0 41.8 10 TAATGCG 170 0.0 41.411766 1 AAACGCG 75 0.0 41.066666 1 CGACGGT 360 0.0 40.944447 28 ACGGTCT 355 0.0 40.90141 30 ATAGCGG 470 0.0 40.723404 2 CGCGTCA 65 0.0 40.615387 39 ACGGGTA 225 0.0 40.08889 5 AATACGG 195 0.0 39.48718 2 >>END_MODULE