##FastQC 0.11.5 >>Basic Statistics pass #Measure Value Filename SRR1545884_1.fastq.gz File type Conventional base calls Encoding Illumina 1.5 Total Sequences 434627 Sequences flagged as poor quality 0 Sequence length 50 %GC 45 >>END_MODULE >>Per base sequence quality pass #Base Mean Median Lower Quartile Upper Quartile 10th Percentile 90th Percentile 1 31.524401383255068 31.0 31.0 33.0 30.0 34.0 2 31.938874023012836 31.0 31.0 34.0 30.0 34.0 3 32.0158204621434 33.0 31.0 34.0 30.0 34.0 4 35.772703950743974 37.0 35.0 37.0 35.0 37.0 5 35.69484868634484 37.0 35.0 37.0 33.0 37.0 6 35.74837274260458 37.0 35.0 37.0 33.0 37.0 7 35.99307912301813 37.0 35.0 37.0 35.0 37.0 8 35.98131271181956 37.0 35.0 37.0 35.0 37.0 9 37.78302314398323 39.0 38.0 39.0 35.0 39.0 10 37.32408709076979 39.0 37.0 39.0 34.0 39.0 11 37.03323539494785 39.0 37.0 39.0 33.0 39.0 12 36.28880166211487 38.0 35.0 39.0 32.0 39.0 13 35.96711893186571 38.0 35.0 39.0 32.0 39.0 14 37.0141707717192 39.0 35.0 41.0 32.0 41.0 15 37.19538822944732 39.0 35.0 41.0 32.0 41.0 16 37.34833086761752 39.0 35.0 41.0 33.0 41.0 17 37.26594988346329 39.0 35.0 41.0 32.0 41.0 18 37.15489603729175 39.0 35.0 41.0 32.0 41.0 19 37.033633437407246 38.0 35.0 41.0 32.0 41.0 20 36.853131535776654 38.0 35.0 41.0 32.0 41.0 21 36.68952688167095 38.0 35.0 41.0 32.0 41.0 22 36.60596097343239 38.0 35.0 41.0 32.0 41.0 23 36.54968743313232 38.0 35.0 40.0 31.0 41.0 24 36.586700780209235 38.0 35.0 41.0 32.0 41.0 25 36.534439876031634 38.0 35.0 40.0 32.0 41.0 26 36.316689943330715 38.0 35.0 40.0 31.0 41.0 27 36.297280196582356 38.0 35.0 40.0 31.0 41.0 28 36.299323327819025 38.0 35.0 40.0 31.0 41.0 29 36.27532803990548 38.0 35.0 40.0 31.0 41.0 30 36.18479063656883 38.0 35.0 40.0 31.0 41.0 31 35.99000752369273 38.0 35.0 40.0 30.0 41.0 32 35.7588967091322 38.0 35.0 40.0 30.0 41.0 33 35.49301585037285 38.0 35.0 40.0 29.0 41.0 34 35.24680243058991 37.0 34.0 40.0 27.0 41.0 35 34.99112112224965 37.0 34.0 40.0 25.0 41.0 36 34.80694710636937 37.0 34.0 40.0 24.0 41.0 37 34.72557158206922 37.0 34.0 40.0 24.0 41.0 38 34.66894601577905 37.0 34.0 40.0 24.0 41.0 39 34.61121145257888 37.0 34.0 40.0 23.0 41.0 40 34.483241952294726 37.0 34.0 40.0 23.0 41.0 41 34.44173049534428 37.0 34.0 40.0 23.0 41.0 42 34.40461591203492 36.0 34.0 40.0 23.0 41.0 43 34.31198475934537 36.0 33.0 40.0 23.0 41.0 44 34.1922591095353 36.0 34.0 40.0 23.0 41.0 45 34.091984621295964 36.0 33.0 40.0 23.0 41.0 46 34.044166607228725 36.0 33.0 40.0 23.0 41.0 47 34.0130617748092 35.0 33.0 40.0 23.0 41.0 48 33.95286533050179 35.0 33.0 40.0 23.0 41.0 49 33.891332107761365 36.0 33.0 40.0 23.0 41.0 50 33.73378782266173 35.0 33.0 40.0 22.0 41.0 >>END_MODULE >>Per sequence quality scores pass #Quality Count 13 1.0 14 2.0 15 14.0 16 20.0 17 90.0 18 179.0 19 365.0 20 642.0 21 1095.0 22 1601.0 23 2441.0 24 3282.0 25 5197.0 26 7773.0 27 9650.0 28 10261.0 29 10018.0 30 10903.0 31 12602.0 32 15363.0 33 20046.0 34 36836.0 35 61759.0 36 27291.0 37 35678.0 38 56902.0 39 104616.0 >>END_MODULE >>Per base sequence content fail #Base G A T C 1 31.219183345719433 23.770037296348363 28.207865595096486 16.80291376283572 2 33.009224001270056 24.29025348172111 29.77380604518357 12.926716471825268 3 27.581351365653767 24.64412013059474 34.544333416929916 13.230195086821572 4 24.547715627423056 26.885352267576568 34.1536535926208 14.413278512379582 5 22.521840566738835 31.15982210032971 32.36775441930667 13.950582913624787 6 20.757799216339528 40.26072931502185 28.99037565544709 9.991095813191542 7 85.63756968619069 3.6969631431089187 9.276460045050124 1.3890071256502703 8 87.77457452022078 2.0751126828291846 8.706315990492998 1.443996806457031 9 83.17177717905238 4.88050673335987 10.094402786757382 1.853313300830367 10 45.058176321305396 32.64569389384461 13.799188729646342 8.496941055203658 11 42.82752797226127 19.70011066960865 23.774638943277797 13.697722414852276 12 38.875863671608066 19.95895330938943 26.185901934302287 14.979281084700213 13 21.91465325439975 35.84176776868441 26.094789325099455 16.148789651816383 14 15.43852544825793 36.762787401611035 30.584616234150204 17.21407091598083 15 15.35178440363806 22.67185425663845 46.861101588258435 15.115259751465048 16 18.362181824875123 19.02090758282389 43.977709622273814 18.639200970027172 17 18.424304058422507 18.892521633492628 30.61866842142803 32.06450588665683 18 21.744852482703557 22.538636578031277 35.44901720325704 20.26749373600812 19 26.804593363964962 23.38672010712634 29.002339937463617 20.806346591445077 20 30.217174726834735 22.01404882807557 28.4533634587819 19.315412986307802 21 22.42497589887421 25.05343662496808 30.97115457622283 21.550432899934886 22 22.664491621551353 22.96382875431117 29.536821228317617 24.834858395819865 23 20.394039026567608 27.324349384644762 28.352357308680777 23.92925428010685 24 20.803355520940944 22.058684803291097 38.88828811831754 18.249671557450412 25 17.84127539246296 24.68461462357378 36.109123455284646 21.364986528678614 26 19.005952230303226 30.509379306853923 29.81821193805263 20.66645652479022 27 18.309032802840136 30.089018859849944 31.460309644821884 20.141638692488044 28 16.331705117261468 26.42679815105826 39.08569877159035 18.155797960089917 29 17.664342068026144 22.68174779753674 38.19021827912209 21.463691855315016 30 19.43528588881961 26.860043209464667 33.51540516350802 20.189265738207705 31 26.883971773497734 25.419497638204714 27.922333403124977 19.774197185172575 32 27.761275760594717 25.07920584777292 29.170530132734505 17.98898825889786 33 25.74391374672996 27.11060288477246 27.35034868979608 19.795134678701505 34 20.790470909538524 26.654119509372403 29.69097640045372 22.86443318063535 35 20.72627793487289 25.562608857710174 31.37080761204435 22.340305595372584 36 27.87102503986177 25.49933621243043 27.17985767106047 19.449781076647334 37 20.917246282444488 30.289190501280412 29.915076605917257 18.878486610357847 38 20.838788202297604 29.79405329167309 26.892254737970724 22.47490376805859 39 21.6914733783221 29.404753961442797 28.246289346957276 20.657483313277822 40 23.55007857312132 25.82260190922331 27.57674971872433 23.050569798931036 41 18.219530770062605 25.48115970705916 28.54930779726064 27.7500017256176 42 22.552441518819585 25.16870788055045 26.154150570489175 26.124700030140787 43 22.92241393194624 26.39044514031572 26.678278155751944 24.008862771986095 44 20.108966999289045 29.827875396604448 28.50191083388745 21.56124677021906 45 18.65714739305197 33.95325186884386 25.003048591090753 22.38655214701342 46 21.69515469586565 30.18979492760459 27.829380135150373 20.28567024137939 47 20.835336967100528 27.201255329282347 28.849105094713394 23.114302608903728 48 22.5009030732099 23.695030451398555 31.561315794923 22.24275068046854 49 20.739622710968256 24.574405179613784 31.69890503811314 22.98706707130482 50 18.88999072768144 31.430168857434076 28.062223469779834 21.617616945104654 >>END_MODULE >>Per sequence GC content fail #GC Content Count 0 101.0 1 303.0 2 505.0 3 3912.5 4 7320.0 5 5272.5 6 3225.0 7 3244.0 8 3263.0 9 3338.5 10 3414.0 11 3292.0 12 3170.0 13 2983.5 14 2797.0 15 2564.0 16 2331.0 17 2197.0 18 2063.0 19 1846.5 20 1630.0 21 1745.0 22 1860.0 23 1857.0 24 1854.0 25 2128.5 26 2403.0 27 3189.5 28 3976.0 29 4614.5 30 5253.0 31 6665.5 32 8078.0 33 9009.5 34 9941.0 35 10975.0 36 12009.0 37 12519.0 38 13029.0 39 16518.0 40 20007.0 41 25851.0 42 31695.0 43 36196.0 44 40697.0 45 40646.5 46 40596.0 47 37860.5 48 35125.0 49 33048.5 50 30972.0 51 30058.0 52 29144.0 53 26271.0 54 23398.0 55 21007.5 56 18617.0 57 18268.5 58 17920.0 59 17494.0 60 17068.0 61 15264.0 62 13460.0 63 11606.0 64 9752.0 65 8179.0 66 6606.0 67 5388.5 68 4171.0 69 3593.5 70 3016.0 71 2425.5 72 1835.0 73 1487.0 74 1139.0 75 872.0 76 605.0 77 458.5 78 312.0 79 240.0 80 168.0 81 106.5 82 45.0 83 37.5 84 30.0 85 23.0 86 16.0 87 12.0 88 8.0 89 5.0 90 2.0 91 1.5 92 1.0 93 0.5 94 0.0 95 0.0 96 0.0 97 0.0 98 0.0 99 0.0 100 0.0 >>END_MODULE >>Per base N content pass #Base N-Count 1 0.0 2 0.0 3 0.0 4 0.0 5 0.0 6 0.0 7 0.0 8 0.0 9 0.0 10 0.0 11 0.0 12 0.0 13 0.0 14 0.0 15 0.0 16 0.0 17 0.0 18 0.0 19 0.0 20 0.0 21 0.0 22 0.0 23 0.0 24 0.0 25 0.0 26 0.0 27 0.0 28 0.0 29 0.0 30 0.0 31 0.0 32 0.0 33 0.0 34 0.0 35 0.0 36 0.0 37 0.0 38 0.0 39 0.0 40 0.0 41 0.0 42 0.0 43 0.0 44 0.0 45 0.0 46 0.0 47 0.0 48 0.0 49 0.0 50 0.0 >>END_MODULE >>Sequence Length Distribution pass #Length Count 50 434627.0 >>END_MODULE >>Sequence Duplication Levels fail #Total Deduplicated Percentage 22.706366608609223 #Duplication Level Percentage of deduplicated Percentage of total 1 75.49144779507134 17.14136489449574 2 5.491042477302205 2.493632471061393 3 2.4146806095979247 1.6448586949269144 4 1.5888456549935148 1.4430764770711437 5 1.2453388456549936 1.4138560190692249 6 0.9758025291828794 1.3294157979140735 7 0.8339413099870299 1.3255043980240528 8 0.783276588845655 1.422829230581625 9 0.7042396238651103 1.4391650771811233 >10 9.078104734111543 48.83934960322299 >50 1.3507214656290532 19.385818184328173 >100 0.04053177691309987 1.0712634051727112 >500 0.0010132944228274966 0.18038455963389297 >1k 0.0010132944228274966 0.8694811873169407 >5k 0.0 0.0 >10k+ 0.0 0.0 >>END_MODULE >>Overrepresented sequences warn #Sequence Count Percentage Possible Source CGTTTTTTTTTTTTTTTTTTTTTTTTTTTTTTTTTTTTTTTTTTTTTTTT 3779 0.8694811873169407 No Hit GACCAGAAAAATGGTCCTGCCAAGCGGCTACAGTGTTCTTCTTTCAGATA 784 0.18038455963389297 No Hit >>END_MODULE >>Adapter Content pass #Position Illumina Universal Adapter Illumina Small RNA 3' Adapter Illumina Small RNA 5' Adapter Nextera Transposase Sequence SOLID Small RNA Adapter 1 0.0 0.0 0.0 0.02254806995423662 0.0 2 0.0 0.0 0.0 0.09364351501402352 0.0 3 0.0 0.0 0.0 0.13758924319013774 0.0 4 0.0 0.0 0.0 0.20707411182462204 0.0 5 0.0 0.0 0.0 0.34742434317242143 0.0 6 0.0 0.0 0.0 0.47143872792072283 0.0 7 0.0 0.0 0.0 0.55150738449291 0.0 8 0.0 0.0 0.0 0.7733067664917274 0.0 9 0.0 0.0 0.0 0.8536055054103864 0.0 10 0.0 0.0 0.0 1.003159030617058 0.0 11 0.0 0.0 0.0 1.143739344311329 0.0 12 0.0 0.0 0.0 1.2827090815802975 0.0 13 0.0 0.0 0.0 1.3340174448435096 0.0 14 0.0 0.0 0.0 1.3517337855218383 0.0 15 0.0 0.0 0.0 1.3864762198390803 0.0 16 0.0 0.0 0.0 1.4605627354030006 0.0 17 0.0 0.0 0.0 1.5512151799128908 0.0 18 0.0 0.0 0.0 1.6947865641112954 0.0 19 0.0 0.0 0.0 1.7435640215633175 0.0 20 0.0 0.0 0.0 1.8093675726542529 0.0 21 0.0 0.0 0.0 1.8928874644235172 0.0 22 0.0 0.0 0.0 1.986300897091069 0.0 23 0.0 0.0 0.0 2.082705400262754 0.0 24 0.0 0.0 0.0 2.1659952096855464 0.0 25 0.0 0.0 0.0 2.227887360886461 0.0 26 0.0 0.0 0.0 2.301513711757438 0.0 27 0.0 0.0 0.0 2.3659367687695427 0.0 28 0.0 0.0 0.0 2.4437046018770117 0.0 29 0.0 0.0 0.0 2.527224493646276 0.0 30 0.0 0.0 0.0 2.6300713025191715 0.0 31 0.0 0.0 0.0 2.7200334999896465 0.0 32 0.0 0.0 0.0 2.806544462263044 0.0 33 0.0 0.0 0.0 2.8919050128040826 0.0 34 0.0 0.0 0.0 2.9837078690463317 0.0 35 0.0 0.0 0.0 3.0969083835104585 0.0 36 0.0 0.0 0.0 3.195843792493333 0.0 37 0.0 0.0 0.0 3.2832750841526184 0.0 38 0.0 0.0 0.0 3.3709364581583747 0.0 >>END_MODULE >>Kmer Content warn #Sequence Count PValue Obs/Exp Max Max Obs/Exp Position GTTGACG 20 7.8510714E-4 44.000004 1 GTACCGG 20 7.8510714E-4 44.000004 2 CGACGTC 20 7.8510714E-4 44.000004 18 CGCATTA 20 7.8510714E-4 44.000004 15 ATCAGCG 20 7.8510714E-4 44.000004 1 TAAGTCC 20 7.8510714E-4 44.000004 21 CACGACC 20 7.8510714E-4 44.000004 27 TGAAACG 20 7.8510714E-4 44.000004 13 GCCGACC 20 7.8510714E-4 44.000004 14 TATTACG 20 7.8510714E-4 44.000004 1 CGCGTAA 20 7.8510714E-4 44.000004 31 CGCAAAA 20 7.8510714E-4 44.000004 14 ACTCACC 20 7.8510714E-4 44.000004 26 CCACGAG 20 7.8510714E-4 44.000004 40 GTAGTCA 20 7.8510714E-4 44.000004 18 ACGCGAG 25 4.4382567E-5 44.0 1 ACTAGCT 25 4.4382567E-5 44.0 22 CTACGAC 30 2.5240697E-6 44.0 13 TACGACC 30 2.5240697E-6 44.0 14 ACGCTTA 25 4.4382567E-5 44.0 10 >>END_MODULE