##FastQC 0.11.5 >>Basic Statistics pass #Measure Value Filename SRR1545882_1.fastq.gz File type Conventional base calls Encoding Illumina 1.5 Total Sequences 1654376 Sequences flagged as poor quality 0 Sequence length 50 %GC 43 >>END_MODULE >>Per base sequence quality pass #Base Mean Median Lower Quartile Upper Quartile 10th Percentile 90th Percentile 1 31.508490814663656 31.0 31.0 33.0 30.0 34.0 2 31.90194671586145 31.0 31.0 34.0 30.0 34.0 3 31.890528513469732 31.0 31.0 34.0 30.0 34.0 4 35.68005036339986 37.0 35.0 37.0 33.0 37.0 5 35.62924752293312 37.0 35.0 37.0 33.0 37.0 6 35.68975371983153 37.0 35.0 37.0 33.0 37.0 7 36.02108287354265 37.0 35.0 37.0 35.0 37.0 8 36.02162386301542 37.0 35.0 37.0 35.0 37.0 9 37.82330256241628 39.0 38.0 39.0 35.0 39.0 10 37.31438016508944 39.0 37.0 39.0 34.0 39.0 11 36.99142395682723 39.0 37.0 39.0 33.0 39.0 12 36.43975069754397 38.0 35.0 39.0 32.0 39.0 13 36.19402662998012 38.0 35.0 39.0 32.0 39.0 14 37.26582892885293 39.0 35.0 41.0 32.0 41.0 15 37.41831361189959 39.0 35.0 41.0 32.0 41.0 16 37.53133447293723 39.0 35.0 41.0 33.0 41.0 17 37.45540977383618 39.0 35.0 41.0 33.0 41.0 18 37.26564880051451 39.0 35.0 41.0 32.0 41.0 19 37.08518680154935 38.0 35.0 41.0 32.0 41.0 20 36.843346977954226 38.0 35.0 41.0 32.0 41.0 21 36.716245279186836 38.0 35.0 40.0 32.0 41.0 22 36.607577721146825 38.0 35.0 40.0 32.0 41.0 23 36.52581819368753 38.0 35.0 40.0 31.0 41.0 24 36.56664204509737 38.0 35.0 40.0 32.0 41.0 25 36.5287407457555 38.0 35.0 40.0 32.0 41.0 26 36.29641024773087 38.0 35.0 40.0 31.0 41.0 27 36.28483246855612 38.0 35.0 40.0 31.0 41.0 28 36.268711586725146 38.0 35.0 40.0 31.0 41.0 29 36.2470599186642 38.0 35.0 40.0 31.0 41.0 30 36.10344927634347 38.0 35.0 40.0 31.0 41.0 31 35.853689245975524 38.0 35.0 40.0 30.0 41.0 32 35.53267999535777 38.0 35.0 40.0 29.0 41.0 33 35.15031770286803 38.0 34.0 40.0 26.0 41.0 34 34.75029195297804 37.0 34.0 40.0 23.0 41.0 35 34.39972654342181 37.0 34.0 40.0 22.0 41.0 36 34.17436302267441 37.0 33.0 40.0 20.0 41.0 37 34.057373898073955 37.0 33.0 40.0 20.0 41.0 38 33.96783862918708 37.0 33.0 40.0 18.0 41.0 39 33.85520341204176 37.0 33.0 40.0 18.0 41.0 40 33.73378180050968 37.0 33.0 40.0 18.0 41.0 41 33.68070559534229 37.0 33.0 40.0 18.0 41.0 42 33.638284767187145 37.0 33.0 40.0 18.0 41.0 43 33.523645773391294 36.0 33.0 40.0 17.0 41.0 44 33.368147265192434 36.0 33.0 40.0 16.0 41.0 45 33.26079682006992 36.0 33.0 40.0 17.0 41.0 46 33.19877827047781 36.0 33.0 40.0 16.0 41.0 47 33.1333669008738 36.0 32.0 40.0 15.0 41.0 48 33.02740731248519 35.0 32.0 40.0 15.0 41.0 49 32.9509168411534 36.0 32.0 40.0 15.0 41.0 50 32.82601899447284 35.0 32.0 40.0 15.0 41.0 >>END_MODULE >>Per sequence quality scores pass #Quality Count 9 1.0 10 0.0 11 1.0 12 2.0 13 1.0 14 18.0 15 34.0 16 79.0 17 304.0 18 712.0 19 1421.0 20 2687.0 21 4379.0 22 6864.0 23 10475.0 24 15822.0 25 25512.0 26 38723.0 27 47695.0 28 46733.0 29 43897.0 30 44821.0 31 49887.0 32 58638.0 33 74913.0 34 126980.0 35 207505.0 36 106272.0 37 135342.0 38 214632.0 39 390026.0 >>END_MODULE >>Per base sequence content fail #Base G A T C 1 30.466471950753636 22.071947368675563 28.69057578204713 18.77100489852367 2 35.5043835258732 23.698361194794895 28.87596290081578 11.92129237851613 3 25.81347891893983 23.570397539616145 38.55435523726166 12.061768304182362 4 23.47035982146743 26.262349066959384 37.11405387892474 13.153237232648443 5 21.242087651174824 30.688670531970967 35.26961222841724 12.79962958843697 6 19.51460852913727 38.60772883552469 31.839799416819393 10.037863218518645 7 82.59071698332181 3.1148300023694735 12.85808062979637 1.4363723845123477 8 84.07042897140674 2.303285347466356 12.27544403448793 1.3508416466389745 9 79.8681194601469 4.724802584176753 13.555564152284608 1.851513803391732 10 40.29785248335324 34.04328882914162 17.46561845674744 8.193240230757699 11 35.335921217425785 19.272341958539048 31.756686508991912 13.635050315043253 12 32.6857377041253 20.394094208329907 32.24956116384667 14.67060692369812 13 20.053663737868536 31.90937247638989 33.32156656044333 14.71539722529824 14 15.196545404430431 34.15420678249684 35.05563426935594 15.593613543716787 15 14.659908025745056 22.78399831719029 47.40071180916551 15.155381847899147 16 17.451413705227832 20.02156704400934 45.26939462371311 17.257624627049715 17 18.131851525892543 19.469092878523384 35.007821680198454 27.39123391538562 18 20.02386398255294 22.68244945526289 37.78584795717539 19.507838605008775 19 23.84875022364928 22.722222759517788 33.696692892063226 19.7323341247697 20 26.168779044183427 22.707050875979824 32.7608113270502 18.36335875278655 21 21.751947562101964 24.055232909568318 35.058414773908716 19.134404754421002 22 21.791237300347685 22.052181608050407 33.5606899519819 22.595891139620015 23 18.408451283142405 25.8958060320024 33.08703704599196 22.60870563886323 24 18.802497134871395 22.64739091959748 40.56979791776477 17.98031402776636 25 17.075380687340726 24.470797448705735 38.27787637151409 20.175945492439446 26 17.616188822855264 29.318788473720602 33.95328510568335 19.11173759774078 27 17.268867536763103 28.72678278698434 35.43789319961122 18.566456476641342 28 15.382295197705965 26.268091413318373 41.031301227774094 17.318312161201565 29 17.12005009743855 22.04831307997698 40.304320178726 20.52731664385847 30 19.08544369599172 25.77352427743149 36.307828450122585 18.833203576454206 31 24.468621401664432 24.74364956938447 33.01685952890999 17.770869500041105 32 24.867502913485207 25.12379289834959 32.234389280308704 17.774314907856496 33 24.732104430915342 25.863830229645497 30.95825858208775 18.445806757351413 34 20.091079657828693 26.1870336610299 33.05705595342292 20.664830727718485 35 20.22726393516347 26.332284801036764 33.18574495761544 20.254706306184325 36 25.768144605579383 25.339644675696455 30.789554490635744 18.102656228088414 37 21.190890099953094 29.191006155795296 31.44714381736679 18.17095992688482 38 19.859753768188128 29.440707553784627 29.90287576705658 20.79666291097066 39 20.831116989124602 28.743828488807864 30.78308679526299 19.641967726804545 40 22.467202135427495 26.641223035150414 29.621379903963792 21.2701949254583 41 19.268231647461036 25.59297281875462 30.098538663520262 25.040256870264077 42 22.025283248789876 26.22765320580086 28.64753840723028 23.099525138178986 43 22.23079880269056 26.385960628055532 28.550039410629747 22.83320115862416 44 20.504045029666777 28.870945903470552 29.721115393356772 20.9038936735059 45 18.398779962958844 32.19878673288297 27.83756534185699 21.564867962301193 46 21.647920424377528 29.711081398666323 29.651723671039715 18.98927450591643 47 21.919382292779876 27.00371620478053 29.768263079251632 21.308638423187958 48 21.991977639907738 25.06661121776428 31.58616904500549 21.355242097322495 49 20.902745204234105 24.74939191574346 33.29388240641789 21.05398047360455 50 19.5271812453759 29.555735818217865 30.353317504605965 20.563765431800267 >>END_MODULE >>Per sequence GC content fail #GC Content Count 0 392.0 1 1308.5 2 2225.0 3 20430.5 4 38636.0 5 28382.0 6 18128.0 7 18349.5 8 18571.0 9 18751.0 10 18931.0 11 18658.5 12 18386.0 13 17371.0 14 16356.0 15 15079.0 16 13802.0 17 12725.5 18 11649.0 19 10943.0 20 10237.0 21 10125.0 22 10013.0 23 10316.0 24 10619.0 25 11370.0 26 12121.0 27 14272.5 28 16424.0 29 19672.5 30 22921.0 31 27468.5 32 32016.0 33 37645.0 34 43274.0 35 47974.5 36 52675.0 37 56252.0 38 59829.0 39 74349.5 40 88870.0 41 101341.0 42 113812.0 43 130409.5 44 147007.0 45 149059.5 46 151112.0 47 145338.5 48 139565.0 49 133768.5 50 127972.0 51 118127.0 52 108282.0 53 97599.0 54 86916.0 55 77322.5 56 67729.0 57 61888.5 58 56048.0 59 50846.5 60 45645.0 61 40525.5 62 35406.0 63 28817.0 64 22228.0 65 17937.5 66 13647.0 67 11512.5 68 9378.0 69 7410.5 70 5443.0 71 4548.5 72 3654.0 73 2917.0 74 2180.0 75 1596.5 76 1013.0 77 832.0 78 651.0 79 464.5 80 278.0 81 220.0 82 162.0 83 135.0 84 108.0 85 68.0 86 28.0 87 27.5 88 27.0 89 16.5 90 6.0 91 4.5 92 3.0 93 1.5 94 0.0 95 0.5 96 1.0 97 0.5 98 0.0 99 0.0 100 0.0 >>END_MODULE >>Per base N content pass #Base N-Count 1 0.0 2 0.0 3 0.0 4 0.0 5 0.0 6 0.0 7 0.0 8 0.0 9 0.0 10 0.0 11 0.0 12 0.0 13 0.0 14 0.0 15 0.0 16 0.0 17 0.0 18 0.0 19 0.0 20 0.0 21 0.0 22 0.0 23 0.0 24 0.0 25 0.0 26 0.0 27 0.0 28 0.0 29 0.0 30 0.0 31 0.0 32 0.0 33 0.0 34 0.0 35 0.0 36 0.0 37 0.0 38 0.0 39 0.0 40 0.0 41 0.0 42 0.0 43 0.0 44 0.0 45 0.0 46 0.0 47 0.0 48 0.0 49 0.0 50 0.0 >>END_MODULE >>Sequence Length Distribution pass #Length Count 50 1654376.0 >>END_MODULE >>Sequence Duplication Levels fail #Total Deduplicated Percentage 21.959778693456794 #Duplication Level Percentage of deduplicated Percentage of total 1 80.8095052969146 17.74558852647969 2 7.308217468281191 3.209736764942201 3 2.419973339195081 1.594262369183689 4 1.184533098729938 1.0404833881273619 5 0.772820280979303 0.8485481170060295 6 0.5521398861987481 0.7274921825252957 7 0.4419482136621638 0.6793559476192773 8 0.3817594205327793 0.6706681911233712 9 0.2936810859788121 0.5804254489093894 >10 3.7056117520586414 19.485957724706516 >50 1.1552752779304012 18.219913169396406 >100 0.9725824627792132 33.51633103859188 >500 0.0013945833994290346 0.16322987923609128 >1k 2.789166798858069E-4 0.24254796314255966 >5k 0.0 0.0 >10k+ 2.789166798858069E-4 1.2754592890102683 >>END_MODULE >>Overrepresented sequences fail #Sequence Count Percentage Possible Source CGTTTTTTTTTTTTTTTTTTTTTTTTTTTTTTTTTTTTTTTTTTTTTTTT 20824 1.2587223218905497 No Hit GACCAGAAAAATGGTCCTGCCAAGCGGCTACAGTGTTCTTCTTTCAGATA 3960 0.239365174543151 No Hit >>END_MODULE >>Adapter Content warn #Position Illumina Universal Adapter Illumina Small RNA 3' Adapter Illumina Small RNA 5' Adapter Nextera Transposase Sequence SOLID Small RNA Adapter 1 0.0 0.0 0.0 0.04448807284438362 0.0 2 0.0 0.0 0.0 0.18810717757027423 0.0 3 0.0 0.0 0.0 0.25211922803522296 0.0 4 0.0 0.0 0.0 0.3355343646184422 0.0 5 0.0 0.0 0.0 0.5288398767873809 0.0 6 0.0 0.0 0.0 0.6883562140650009 0.0 7 0.0 0.0 0.0 0.7989114929133402 0.0 8 0.0 0.0 0.0 1.1013215859030836 0.0 9 0.0 0.0 0.0 1.2527986382781182 0.0 10 0.0 0.0 0.0 1.5856733898460809 0.0 11 0.0 0.0 0.0 1.9453860549234274 0.0 12 6.044575114726036E-5 0.0 0.0 2.253175819765277 0.0 13 6.044575114726036E-5 0.0 0.0 2.3700174567329313 0.0 14 6.044575114726036E-5 0.0 0.0 2.4106974472550378 0.0 15 6.044575114726036E-5 0.0 0.0 2.4794242663094725 0.0 16 6.044575114726036E-5 0.0 0.0 2.6419628911444555 0.0 17 6.044575114726036E-5 0.0 0.0 2.862771220085398 0.0 18 6.044575114726036E-5 0.0 0.0 3.132057041446443 0.0 19 6.044575114726036E-5 0.0 0.0 3.270477811573669 0.0 20 6.044575114726036E-5 0.0 0.0 3.4229219959670596 0.0 21 6.044575114726036E-5 0.0 0.0 3.604198803657693 0.0 22 6.044575114726036E-5 0.0 0.0 3.7987736766007245 0.0 23 6.044575114726036E-5 0.0 0.0 4.005800374280091 0.0 24 6.044575114726036E-5 0.0 0.0 4.167674095852455 0.0 25 6.044575114726036E-5 0.0 0.0 4.304946396707883 0.0 26 6.044575114726036E-5 0.0 0.0 4.433454063646958 0.0 27 6.044575114726036E-5 0.0 0.0 4.569336112225999 0.0 28 6.044575114726036E-5 0.0 0.0 4.708844905873876 0.0 29 6.044575114726036E-5 0.0 0.0 4.858327248461051 0.0 30 6.044575114726036E-5 0.0 0.0 5.046253088777884 0.0 31 6.044575114726036E-5 6.044575114726036E-5 0.0 5.216589215510863 0.0 32 6.044575114726036E-5 6.044575114726036E-5 0.0 5.377133130557987 0.0 33 6.044575114726036E-5 6.044575114726036E-5 0.0 5.536165901826429 0.0 34 6.044575114726036E-5 6.044575114726036E-5 0.0 5.705474450789905 0.0 35 6.044575114726036E-5 6.044575114726036E-5 0.0 5.902044033520796 0.0 36 6.044575114726036E-5 6.044575114726036E-5 0.0 6.078847855626532 0.0 37 6.044575114726036E-5 6.044575114726036E-5 0.0 6.263328288127971 0.0 38 6.044575114726036E-5 6.044575114726036E-5 0.0 6.447264708869084 0.0 >>END_MODULE >>Kmer Content fail #Sequence Count PValue Obs/Exp Max Max Obs/Exp Position GGTACGA 45 4.802132E-10 44.0 8 CGAACGT 20 7.8574865E-4 44.0 15 CGTGCTA 20 7.8574865E-4 44.0 18 ACCGCGT 20 7.8574865E-4 44.0 23 CGACCGT 20 7.8574865E-4 44.0 19 CGCGAGA 20 7.8574865E-4 44.0 20 CGACAGG 140 0.0 44.0 2 CCGCTAG 20 7.8574865E-4 44.0 32 CCGTAGT 25 4.443691E-5 44.0 41 TAACCGA 25 4.443691E-5 44.0 39 CTACGAC 20 7.8574865E-4 44.0 13 TACGACA 30 2.5283953E-6 44.0 28 GCGATCG 30 2.5283953E-6 44.0 9 TTACGCG 30 2.5283953E-6 44.0 1 ATACGAC 30 2.5283953E-6 44.0 27 CGTCCAT 20 7.8574865E-4 44.0 15 CGTCACG 20 7.8574865E-4 44.0 21 TATCGAT 25 4.443691E-5 44.0 29 TAATGCG 45 4.802132E-10 44.0 1 AATACGA 20 7.8574865E-4 44.0 21 >>END_MODULE