##FastQC 0.11.5 >>Basic Statistics pass #Measure Value Filename SRR1545881_1.fastq.gz File type Conventional base calls Encoding Illumina 1.5 Total Sequences 907158 Sequences flagged as poor quality 0 Sequence length 50 %GC 46 >>END_MODULE >>Per base sequence quality pass #Base Mean Median Lower Quartile Upper Quartile 10th Percentile 90th Percentile 1 31.49695642875883 31.0 31.0 33.0 30.0 34.0 2 31.91185879416816 31.0 31.0 34.0 30.0 34.0 3 32.00553376589304 33.0 31.0 34.0 30.0 34.0 4 35.75999329774967 37.0 35.0 37.0 35.0 37.0 5 35.6870710504675 37.0 35.0 37.0 33.0 37.0 6 35.73132243776718 37.0 35.0 37.0 33.0 37.0 7 35.96730889216652 37.0 35.0 37.0 35.0 37.0 8 35.95182537110404 37.0 35.0 37.0 35.0 37.0 9 37.73757823885145 39.0 38.0 39.0 35.0 39.0 10 37.28465824035063 39.0 37.0 39.0 34.0 39.0 11 37.01859764230707 39.0 37.0 39.0 33.0 39.0 12 36.41842655854879 38.0 35.0 39.0 32.0 39.0 13 36.173890325610316 38.0 35.0 39.0 32.0 39.0 14 37.23494584184894 39.0 35.0 41.0 32.0 41.0 15 37.37797825737082 39.0 35.0 41.0 32.0 41.0 16 37.499959213279276 39.0 35.0 41.0 33.0 41.0 17 37.42564911514863 39.0 35.0 41.0 33.0 41.0 18 37.307187943004415 39.0 35.0 41.0 32.0 41.0 19 37.184719751134864 38.0 35.0 41.0 32.0 41.0 20 37.0098384184453 38.0 35.0 41.0 32.0 41.0 21 36.890464505631876 38.0 35.0 41.0 32.0 41.0 22 36.775641068038865 38.0 35.0 41.0 32.0 41.0 23 36.68910928415998 38.0 35.0 41.0 31.0 41.0 24 36.73340256052418 38.0 35.0 41.0 32.0 41.0 25 36.715058457291896 38.0 35.0 41.0 32.0 41.0 26 36.482018567879024 38.0 35.0 41.0 31.0 41.0 27 36.429378344235516 38.0 35.0 41.0 31.0 41.0 28 36.414533080235195 38.0 35.0 40.0 31.0 41.0 29 36.37780298470608 38.0 35.0 40.0 31.0 41.0 30 36.28887580774242 38.0 35.0 40.0 31.0 41.0 31 36.12977342425465 38.0 35.0 40.0 30.0 41.0 32 35.930823516961766 38.0 35.0 40.0 30.0 41.0 33 35.69664600874379 38.0 35.0 40.0 29.0 41.0 34 35.450251224152794 38.0 35.0 40.0 27.0 41.0 35 35.22871539467215 38.0 34.0 40.0 26.0 41.0 36 35.06550788286054 38.0 34.0 40.0 25.0 41.0 37 34.96195701300104 38.0 34.0 40.0 25.0 41.0 38 34.89841681382956 38.0 34.0 40.0 25.0 41.0 39 34.79759314253967 37.0 34.0 40.0 24.0 41.0 40 34.65735516855939 37.0 34.0 40.0 23.0 41.0 41 34.619163365146974 37.0 34.0 40.0 23.0 41.0 42 34.59380284360608 37.0 34.0 40.0 23.0 41.0 43 34.50058093518439 37.0 34.0 40.0 23.0 41.0 44 34.35804236968643 37.0 34.0 40.0 23.0 41.0 45 34.28446202315363 36.0 34.0 40.0 23.0 41.0 46 34.21824974260272 36.0 33.0 40.0 23.0 41.0 47 34.162444689899665 36.0 33.0 40.0 23.0 41.0 48 34.033253303173204 36.0 33.0 40.0 23.0 41.0 49 33.96737833982614 36.0 33.0 40.0 23.0 41.0 50 33.80832225477811 35.0 33.0 40.0 23.0 41.0 >>END_MODULE >>Per sequence quality scores pass #Quality Count 11 3.0 12 3.0 13 2.0 14 13.0 15 30.0 16 73.0 17 150.0 18 362.0 19 695.0 20 1254.0 21 2064.0 22 3192.0 23 4676.0 24 6766.0 25 10256.0 26 14764.0 27 18870.0 28 20193.0 29 20760.0 30 22472.0 31 26322.0 32 32216.0 33 41609.0 34 72956.0 35 115913.0 36 62939.0 37 81200.0 38 125572.0 39 221833.0 >>END_MODULE >>Per base sequence content fail #Base G A T C 1 31.670227237151632 22.688660630232 29.471492286900407 16.16961984571596 2 33.00549628620373 25.48784225019236 29.3123138416902 12.194347621913714 3 27.45078586089744 24.86468729813329 34.61690245800621 13.067624382963055 4 25.858891174415042 27.254899367034184 33.09037675906513 13.795832699485647 5 22.845634387835414 31.905908342317435 32.00015873750769 13.248298532339462 6 21.5278926052573 39.37406714155638 28.79310991029126 10.304930342895064 7 85.91700673973001 3.7792754955586565 8.730452688506302 1.573265076205027 8 87.5231216612762 2.5378159041754578 8.426646736290701 1.5124156982576353 9 82.3112401588257 5.420775653193821 9.77591555164591 2.4920686363345745 10 43.57730406390067 31.565284107068447 14.513899453017004 10.34351237601388 11 39.17884205397516 19.654128608246854 25.598738036813874 15.568291300964109 12 35.72575008984102 19.512146726369608 28.356802232907608 16.405300950881767 13 22.419909210964352 30.93738907665478 28.85880960097359 17.783892111407273 14 17.02062926193673 32.85326260695491 32.11325921173599 18.01284891937237 15 17.00376340174479 22.17386607404664 43.8488113426768 16.973559181531773 16 19.325078982933512 19.29597710652389 40.71705259723223 20.66189131331036 17 19.349661249749218 19.817385725529622 31.427270662883423 29.405682361837737 18 22.40976764797312 22.487372651732112 33.43276474439954 21.670094955895223 19 26.554800817498165 22.78114727533682 28.946886870864834 21.71716503630018 20 28.260126681349885 22.419798976584012 28.73589826689507 20.58417607517103 21 24.222351563895153 25.141596061546057 29.938665590779113 20.697386783779674 22 24.055015774539825 23.028072287297253 28.775251940676267 24.141659997486656 23 21.656756595874146 25.260649192312695 29.51459392961314 23.568000282200014 24 20.981350547534166 22.407011788464633 37.11679773534489 19.49483992865631 25 19.700537282369773 24.361687820644253 34.15347712305905 21.784297773926923 26 19.694584625831443 28.75783490858263 29.52837322715558 22.01920723843035 27 19.291677965690653 28.07625573494364 31.631424735272134 21.000641564093574 28 17.815970316086062 26.168539548788633 36.581940521937746 19.43354961318756 29 19.1502472557151 22.63773234651516 36.20416730051436 22.007853097255385 30 20.68746568954912 25.801459062258175 32.43955297754085 21.07152227065186 31 26.55281659865205 24.98098456939144 28.307417230515526 20.158781601440985 32 27.893707601101465 24.704186040359012 28.380723093441272 19.02138326509825 33 26.41436221694567 24.89676550281208 28.059941046653396 20.628931233588858 34 20.982122188196545 26.113201889858217 30.773580787470316 22.131095134474922 35 22.102875133108014 24.890151439991712 31.541693949675803 21.465279477224474 36 26.704388871618832 25.771254842045156 27.641601573265078 19.882754713070934 37 22.776186728221546 29.59164776147044 28.082759563383668 19.54940594692435 38 22.628252189805963 29.294125168934187 26.588532537882042 21.4890901033778 39 23.212935343126556 27.691317278798184 27.823157597684194 21.27258978039107 40 23.943348347255935 25.726168980486307 26.727868794631142 23.60261387762661 41 19.689954781857185 25.309703491563763 28.276661838400805 26.723679888178243 42 21.769305898200756 25.610533115510197 26.60142996038176 26.018731025907282 43 22.630346643032414 25.758577888306117 27.364803044232648 24.24627242442882 44 21.18153618223066 27.63862524499591 28.433415127243546 22.74642344552989 45 19.507516882395347 31.68279395651033 26.395512137907616 22.4141770231867 46 21.633497141622517 30.029168017037826 27.712041342302 20.625293499037653 47 22.06418286560886 25.527085689593214 29.79040034922252 22.61833109557541 48 22.634645783865658 23.560945281858288 31.420325896922037 22.38408303735402 49 21.479940649809627 24.33335758489701 31.875924590865097 22.31077717442827 50 20.073349956677887 28.933768979604434 29.637946201213015 21.354934862504656 >>END_MODULE >>Per sequence GC content fail #GC Content Count 0 249.0 1 799.0 2 1349.0 3 8329.0 4 15309.0 5 10849.5 6 6390.0 7 6380.0 8 6370.0 9 6279.5 10 6189.0 11 6113.5 12 6038.0 13 5632.0 14 5226.0 15 4837.5 16 4449.0 17 4012.5 18 3576.0 19 3298.5 20 3021.0 21 2938.0 22 2855.0 23 3076.5 24 3298.0 25 4645.5 26 5993.0 27 7748.5 28 9504.0 29 11112.0 30 12720.0 31 14671.0 32 16622.0 33 19501.0 34 22380.0 35 23812.0 36 25244.0 37 26922.5 38 28601.0 39 33992.0 40 39383.0 41 47740.5 42 56098.0 43 64066.0 44 72034.0 45 73699.5 46 75365.0 47 72632.5 48 69900.0 49 68545.5 50 67191.0 51 62688.5 52 58186.0 53 55633.0 54 53080.0 55 49794.5 56 46509.0 57 43513.5 58 40518.0 59 39634.0 60 38750.0 61 36565.5 62 34381.0 63 29265.0 64 24149.0 65 20482.0 66 16815.0 67 13811.0 68 10807.0 69 9227.5 70 7648.0 71 6282.5 72 4917.0 73 3752.0 74 2587.0 75 2142.0 76 1697.0 77 1246.5 78 796.0 79 620.5 80 445.0 81 350.0 82 255.0 83 188.5 84 122.0 85 92.0 86 62.0 87 44.5 88 27.0 89 19.0 90 11.0 91 11.0 92 11.0 93 6.5 94 2.0 95 15.0 96 28.0 97 14.5 98 1.0 99 0.5 100 0.0 >>END_MODULE >>Per base N content pass #Base N-Count 1 0.0 2 0.0 3 0.0 4 0.0 5 0.0 6 0.0 7 0.0 8 0.0 9 0.0 10 0.0 11 0.0 12 0.0 13 0.0 14 0.0 15 0.0 16 0.0 17 0.0 18 0.0 19 0.0 20 0.0 21 0.0 22 0.0 23 0.0 24 0.0 25 0.0 26 0.0 27 0.0 28 0.0 29 0.0 30 0.0 31 0.0 32 0.0 33 0.0 34 0.0 35 0.0 36 0.0 37 0.0 38 0.0 39 0.0 40 0.0 41 0.0 42 0.0 43 0.0 44 0.0 45 0.0 46 0.0 47 0.0 48 0.0 49 0.0 50 0.0 >>END_MODULE >>Sequence Length Distribution pass #Length Count 50 907158.0 >>END_MODULE >>Sequence Duplication Levels fail #Total Deduplicated Percentage 19.24535544408976 #Duplication Level Percentage of deduplicated Percentage of total 1 77.94120264527442 15.000061486481354 2 5.893102956882035 2.268297221476223 3 2.1796745857571658 1.2584583646603733 4 1.2246295959360423 0.9427372744456464 5 0.9423540226072891 0.9067969059622538 6 0.7149495960597234 0.8255675460466664 7 0.5892025079921707 0.7937588186400927 8 0.5119866647725649 0.7882692276945635 9 0.46839218851114744 0.8112936739618916 >10 6.7445736808480135 31.335988318726894 >50 2.230092623209068 30.48981839308945 >100 0.5569442117152448 13.287930997339092 >500 0.001736832261066252 0.22484525199253977 >1k 5.78944087022084E-4 0.16256155731274308 >5k 5.78944087022084E-4 0.9036149621702168 >10k+ 0.0 0.0 >>END_MODULE >>Overrepresented sequences warn #Sequence Count Percentage Possible Source CGTTTTTTTTTTTTTTTTTTTTTTTTTTTTTTTTTTTTTTTTTTTTTTTT 8110 0.894000824553165 No Hit GACCAGAAAAATGGTCCTGCCAAGCGGCTACAGTGTTCTTCTTTCAGATA 1459 0.1608319609152981 No Hit >>END_MODULE >>Adapter Content pass #Position Illumina Universal Adapter Illumina Small RNA 3' Adapter Illumina Small RNA 5' Adapter Nextera Transposase Sequence SOLID Small RNA Adapter 1 0.0 0.0 0.0 0.024141329294345638 0.0 2 0.0 0.0 0.0 0.07870734756238715 0.0 3 0.0 0.0 0.0 0.1106753178608357 0.0 4 0.0 0.0 0.0 0.17990250871402777 0.0 5 0.0 0.0 0.0 0.31813642165973294 0.0 6 0.0 0.0 0.0 0.44170916202028754 0.0 7 0.0 0.0 0.0 0.5347469790268068 0.0 8 0.0 0.0 0.0 0.7767114438719606 0.0 9 0.0 0.0 0.0 0.8822057458568409 0.0 10 0.0 0.0 0.0 1.0661869266434292 0.0 11 0.0 0.0 0.0 1.2261370125160116 0.0 12 0.0 0.0 0.0 1.3844335826835017 0.0 13 0.0 0.0 0.0 1.4410940541779933 0.0 14 0.0 0.0 0.0 1.4572985080878964 0.0 15 0.0 0.0 0.0 1.485518509454803 0.0 16 0.0 0.0 0.0 1.5626825756924372 0.0 17 0.0 0.0 0.0 1.6562715646006538 0.0 18 0.0 0.0 0.0 1.7866788365422561 0.0 19 0.0 0.0 0.0 1.854032042929677 0.0 20 0.0 0.0 0.0 1.932188218590367 0.0 21 0.0 0.0 0.0 2.0252260355968863 0.0 22 0.0 0.0 0.0 2.1249881498041137 0.0 23 0.0 0.0 0.0 2.2299312798872966 0.0 24 0.0 0.0 0.0 2.3160243309324287 0.0 25 0.0 0.0 0.0 2.385582224926639 0.0 26 0.0 0.0 0.0 2.4555810564422074 0.0 27 0.0 0.0 0.0 2.5250287160560783 0.0 28 0.0 0.0 0.0 2.5938149693879127 0.0 29 0.0 0.0 0.0 2.66612872289061 0.0 30 0.0 0.0 0.0 2.7686466966063246 0.0 31 0.0 0.0 0.0 2.8635584980786146 0.0 32 0.0 0.0 0.0 2.948108267798994 0.0 33 0.0 0.0 0.0 3.0360753033098975 0.0 34 0.0 0.0 0.0 3.1334122611496564 0.0 35 0.0 0.0 0.0 3.2450796884335475 0.0 36 0.0 0.0 0.0 3.3461646152048488 0.0 37 0.0 0.0 0.0 3.4493439952025997 0.0 38 0.0 0.0 0.0 3.552082437678993 0.0 >>END_MODULE >>Kmer Content warn #Sequence Count PValue Obs/Exp Max Max Obs/Exp Position GCGAACT 20 7.855603E-4 44.0 33 CCGTGTA 20 7.855603E-4 44.0 19 TAACGGC 25 4.442095E-5 44.0 19 ATGTACG 20 7.855603E-4 44.0 1 ATGCGAT 20 7.855603E-4 44.0 19 CGGTCTA 140 0.0 44.0 31 CACGTTA 20 7.855603E-4 44.0 32 CGCAATA 20 7.855603E-4 44.0 43 TAGTGCG 60 0.0 44.0 1 TTCGAAC 20 7.855603E-4 44.0 33 CCGTTTA 25 4.442095E-5 44.0 38 GCGTATG 20 7.855603E-4 44.0 1 AATACGG 50 2.7284841E-11 44.0 2 TGCGTAG 20 7.855603E-4 44.0 1 CGAAGTA 40 8.309144E-9 44.0 23 CGTTTTT 5375 0.0 42.48558 1 AGTACGG 75 0.0 41.066666 2 CTCACGA 145 0.0 40.96552 24 TGATTCG 70 0.0 40.857143 15 GGATCGA 55 7.8216544E-11 40.000004 8 >>END_MODULE