##FastQC 0.11.5 >>Basic Statistics pass #Measure Value Filename SRR1545872_1.fastq.gz File type Conventional base calls Encoding Illumina 1.5 Total Sequences 1199132 Sequences flagged as poor quality 0 Sequence length 50 %GC 45 >>END_MODULE >>Per base sequence quality pass #Base Mean Median Lower Quartile Upper Quartile 10th Percentile 90th Percentile 1 31.473302355370386 31.0 31.0 33.0 30.0 34.0 2 31.888202466450732 31.0 31.0 34.0 30.0 34.0 3 31.978187555665265 33.0 31.0 34.0 30.0 34.0 4 35.737581016935586 37.0 35.0 37.0 35.0 37.0 5 35.66975695753261 37.0 35.0 37.0 33.0 37.0 6 35.71631646891252 37.0 35.0 37.0 33.0 37.0 7 35.96614968160303 37.0 35.0 37.0 35.0 37.0 8 35.94077299246455 37.0 35.0 37.0 35.0 37.0 9 37.70834236764593 39.0 38.0 39.0 35.0 39.0 10 37.24489130471041 39.0 37.0 39.0 34.0 39.0 11 37.02564855245294 39.0 37.0 39.0 33.0 39.0 12 36.5987606035032 39.0 35.0 39.0 32.0 39.0 13 36.40616212393631 39.0 35.0 39.0 32.0 39.0 14 37.4772810666382 40.0 36.0 41.0 32.0 41.0 15 37.597603933511905 40.0 36.0 41.0 32.0 41.0 16 37.68110683394322 40.0 35.0 41.0 33.0 41.0 17 37.59197402788017 40.0 35.0 41.0 32.0 41.0 18 37.470928138019836 39.0 36.0 41.0 32.0 41.0 19 37.395013226233644 39.0 36.0 41.0 32.0 41.0 20 37.228414386406165 39.0 35.0 41.0 32.0 41.0 21 37.106404465897 39.0 35.0 41.0 32.0 41.0 22 37.02344028847533 39.0 35.0 41.0 32.0 41.0 23 36.905381559327914 39.0 35.0 41.0 31.0 41.0 24 36.98008225950104 39.0 35.0 41.0 32.0 41.0 25 36.93591197632954 39.0 35.0 41.0 32.0 41.0 26 36.689483726562216 38.0 35.0 41.0 31.0 41.0 27 36.68967303015848 38.0 35.0 41.0 31.0 41.0 28 36.64865586107284 38.0 35.0 41.0 31.0 41.0 29 36.5878802333688 38.0 35.0 41.0 31.0 41.0 30 36.47074217016976 38.0 35.0 41.0 30.0 41.0 31 36.33239876844251 38.0 35.0 41.0 30.0 41.0 32 36.172574829126404 38.0 35.0 41.0 30.0 41.0 33 35.93251618670838 38.0 35.0 41.0 29.0 41.0 34 35.68109432489501 38.0 35.0 41.0 27.0 41.0 35 35.44793150378774 38.0 35.0 41.0 26.0 41.0 36 35.28735535370585 38.0 34.0 40.0 25.0 41.0 37 35.2045479563551 38.0 34.0 40.0 25.0 41.0 38 35.10274515232685 38.0 34.0 40.0 25.0 41.0 39 34.97534299810196 38.0 34.0 40.0 24.0 41.0 40 34.869054449385054 38.0 34.0 40.0 23.0 41.0 41 34.803065050386444 38.0 34.0 40.0 23.0 41.0 42 34.7756126931814 38.0 34.0 40.0 23.0 41.0 43 34.68930359626797 38.0 34.0 40.0 23.0 41.0 44 34.57412278214575 37.0 34.0 40.0 23.0 41.0 45 34.49239449868738 37.0 34.0 40.0 23.0 41.0 46 34.4400249513815 37.0 34.0 40.0 23.0 41.0 47 34.38412618460686 37.0 33.0 40.0 23.0 41.0 48 34.26174432839754 37.0 33.0 40.0 23.0 41.0 49 34.18770077022379 37.0 33.0 40.0 23.0 41.0 50 34.06720361061168 36.0 33.0 40.0 23.0 41.0 >>END_MODULE >>Per sequence quality scores pass #Quality Count 10 2.0 11 5.0 12 3.0 13 8.0 14 14.0 15 41.0 16 93.0 17 229.0 18 539.0 19 987.0 20 1743.0 21 2884.0 22 4254.0 23 6155.0 24 8869.0 25 13417.0 26 19302.0 27 24761.0 28 26563.0 29 27151.0 30 29240.0 31 33870.0 32 41074.0 33 51860.0 34 84998.0 35 122909.0 36 85533.0 37 113507.0 38 179030.0 39 320091.0 >>END_MODULE >>Per base sequence content fail #Base G A T C 1 33.007208547516036 22.651801469729772 29.041339902529494 15.299650080224698 2 33.835724507393685 24.347194470667116 29.10355156896822 12.713529452970981 3 28.82718499714794 24.568604624011368 33.69220402757995 12.912006351260747 4 25.32131575172708 26.960835003986215 33.42684541818582 14.291003826100878 5 22.616108985499512 31.929929315538242 31.81684751970592 13.63711417925633 6 21.56726698978928 40.18590113515443 28.134350513538127 10.112481361518165 7 85.85560221893836 3.566746613383681 8.853153781235093 1.72449738644286 8 86.62440832201959 2.8599019957769456 8.94021675678741 1.575472925416051 9 81.14244303379444 5.996420744338405 10.291110569978953 2.570025651888199 10 36.34979301694893 38.11456953863294 15.237438413785972 10.298199030632157 11 35.0878802333688 22.221406817598062 27.26405433263394 15.426658616399195 12 31.38136585463485 22.064376565715868 30.10435881954614 16.44989876010314 13 23.981012932687978 26.9831845034575 31.41047024014037 17.625332323714154 14 18.538576236811295 29.75235420287341 33.55377056070557 18.155298999609716 15 18.48520429777539 23.705647084724617 39.98417188432967 17.824976733170324 16 21.95796626226304 22.0567877431342 36.7636757254414 19.221570269161358 17 21.776501669540966 21.611215445839157 31.267867090528817 25.344415794091056 18 23.222547642794954 23.3131131518465 33.046737139864504 20.41760206549404 19 25.846779170266494 23.531521133619986 29.705653756217 20.916045939896524 20 27.76316535627437 23.85216973610912 29.352064660104144 19.03260024751237 21 25.046700446656416 24.115109929515683 30.871914017806212 19.96627560602169 22 24.408822381522636 22.391613266929745 30.980158981663404 22.219405369884214 23 21.153384281296805 25.238589246221434 30.91961518831955 22.68841128416221 24 21.849220936477384 23.85617263153681 34.39145982260502 19.903146609380784 25 20.967916793147044 25.12742550444822 32.410109979551876 21.494547722852865 26 20.48298269081302 28.10766454402017 29.702568190991485 21.70678457417532 27 20.37540487619378 27.02913440722122 32.147920329038 20.447540387546994 28 19.405036309597275 25.204314454121814 35.05869245420855 20.331956782072368 29 20.291427465866978 23.49391059533062 34.55674604630683 21.657915892495573 30 21.144794734858213 25.74570606071725 32.78504785127909 20.32445135314544 31 24.534746800185466 25.039862166967442 29.84083487055637 20.584556162290724 32 25.68799765163468 25.54998115303403 29.286100279201953 19.475920916129333 33 24.76799885250331 26.002892091946507 29.319207560135162 19.909901495415017 34 21.482956004843505 26.20879102550845 30.729894623777867 21.57835834587018 35 21.846218764906617 26.53677826961502 30.430177828629372 21.186825136848988 36 25.356174299409908 26.286347124419997 28.406880977240206 19.950597598929892 37 22.51595320615245 28.81826187609037 28.350089898359816 20.315695019397364 38 22.66422712428657 28.632460813321636 27.533582624765245 21.16972943762655 39 22.63187038624605 28.397957856182636 27.66734604697398 21.302825710597332 40 23.393838209638304 26.157587321495885 27.759996397394115 22.6885780714717 41 20.88552386226037 26.55462451173015 28.35367582551379 24.206175800495693 42 22.03610611675779 26.48574135291194 27.792436529089375 23.6857160012409 43 22.372849694612437 26.14808044485511 28.354509762061227 23.12456009847123 44 21.92227377803278 27.38689318607126 29.133072922747456 21.55776011314851 45 20.767021478869715 29.326379414443117 27.459195484733957 22.447403621953214 46 21.643655577534414 28.622036606478684 28.399125367349047 21.33518244863785 47 21.812194153771227 27.23303189306932 28.979211629745517 21.975562323413936 48 22.384358018967053 25.627120283671857 30.45186017886271 21.53666151849838 49 22.185047184129854 25.36876674127619 30.636660517774523 21.809525556819434 50 20.286757421201333 28.93926606912333 29.33563611011965 21.438340399555678 >>END_MODULE >>Per sequence GC content fail #GC Content Count 0 346.0 1 1190.0 2 2034.0 3 11322.0 4 20610.0 5 14623.5 6 8637.0 7 8467.0 8 8297.0 9 8199.5 10 8102.0 11 7718.5 12 7335.0 13 6915.5 14 6496.0 15 6104.5 16 5713.0 17 5613.5 18 5514.0 19 5144.0 20 4774.0 21 5158.0 22 5542.0 23 5988.0 24 6434.0 25 7600.0 26 8766.0 27 10482.0 28 12198.0 29 15944.5 30 19691.0 31 21780.5 32 23870.0 33 27584.0 34 31298.0 35 34211.0 36 37124.0 37 40997.0 38 44870.0 39 51230.0 40 57590.0 41 67487.5 42 77385.0 43 83458.5 44 89532.0 45 90461.0 46 91390.0 47 89948.0 48 88506.0 49 86670.0 50 84834.0 51 81633.5 52 78433.0 53 73213.5 54 67994.0 55 64402.5 56 60811.0 57 59028.5 58 57246.0 59 53259.5 60 49273.0 61 45545.0 62 41817.0 63 36730.5 64 31644.0 65 26012.0 66 20380.0 67 16879.0 68 13378.0 69 11087.5 70 8797.0 71 7256.5 72 5716.0 73 4574.0 74 3432.0 75 2537.0 76 1642.0 77 1217.0 78 792.0 79 608.0 80 424.0 81 338.5 82 253.0 83 190.0 84 127.0 85 84.0 86 41.0 87 30.0 88 19.0 89 18.0 90 17.0 91 9.0 92 1.0 93 2.5 94 4.0 95 3.5 96 3.0 97 1.5 98 0.0 99 0.0 100 0.0 >>END_MODULE >>Per base N content pass #Base N-Count 1 0.0 2 0.0 3 0.0 4 0.0 5 0.0 6 0.0 7 0.0 8 0.0 9 0.0 10 0.0 11 0.0 12 0.0 13 0.0 14 0.0 15 0.0 16 0.0 17 0.0 18 0.0 19 0.0 20 0.0 21 0.0 22 0.0 23 0.0 24 0.0 25 0.0 26 0.0 27 0.0 28 0.0 29 0.0 30 0.0 31 0.0 32 0.0 33 0.0 34 0.0 35 0.0 36 0.0 37 0.0 38 0.0 39 0.0 40 0.0 41 0.0 42 0.0 43 0.0 44 0.0 45 0.0 46 0.0 47 0.0 48 0.0 49 0.0 50 0.0 >>END_MODULE >>Sequence Length Distribution pass #Length Count 50 1199132.0 >>END_MODULE >>Sequence Duplication Levels fail #Total Deduplicated Percentage 20.762782169088364 #Duplication Level Percentage of deduplicated Percentage of total 1 76.05473404477621 15.791078758996377 2 5.965912929021969 2.477379011700622 3 2.3172783802632964 1.4433943870363422 4 1.4303185775258802 1.1878957223028075 5 1.0774862520907484 1.1185806171173822 6 0.8407239098025758 1.0473460442145108 7 0.7323394090287556 1.064378253645207 8 0.6476711438625989 1.0757963901778749 9 0.5601645304782563 1.0467516712652727 >10 8.287829120361186 40.8383152787233 >50 1.884540313170125 26.78168148982895 >100 0.2001892627916493 5.075718661771979 >500 0.0 0.0 >1k 4.060634133704852E-4 0.11727529622319187 >5k 0.0 0.0 >10k+ 4.060634133704852E-4 0.9344084169961433 >>END_MODULE >>Overrepresented sequences warn #Sequence Count Percentage Possible Source CGTTTTTTTTTTTTTTTTTTTTTTTTTTTTTTTTTTTTTTTTTTTTTTTT 11083 0.9242518755232952 No Hit GACCAGAAAAATGGTCCTGCCAAGCGGCTACAGTGTTCTTCTTTCAGATA 1391 0.11600057374834465 No Hit >>END_MODULE >>Adapter Content pass #Position Illumina Universal Adapter Illumina Small RNA 3' Adapter Illumina Small RNA 5' Adapter Nextera Transposase Sequence SOLID Small RNA Adapter 1 0.0 0.0 0.0 0.0235170106376946 0.0 2 0.0 0.0 0.0 0.07722252429257162 0.0 3 0.0 0.0 0.0 0.11124713542795955 0.0 4 0.0 0.0 0.0 0.15169305797860452 0.0 5 0.0 0.0 0.0 0.25393367869425554 0.0 6 0.0 0.0 0.0 0.3550901818982397 0.0 7 0.0 0.0 0.0 0.42705890594196466 0.0 8 0.0 0.0 0.0 0.5997671649159558 0.0 9 0.0 0.0 0.0 0.6817431275289125 0.0 10 0.0 0.0 0.0 0.8199264134390543 0.0 11 0.0 0.0 0.0 0.9530226864098365 0.0 12 0.0 0.0 0.0 1.0724424000026687 0.0 13 0.0 0.0 0.0 1.1219782309203656 0.0 14 0.0 0.0 0.0 1.141825920749342 0.0 15 0.0 0.0 0.0 1.1710970935643448 0.0 16 0.0 0.0 0.0 1.2332253663483252 0.0 17 0.0 0.0 0.0 1.3123659446999996 0.0 18 0.0 0.0 0.0 1.4221953879973182 0.0 19 0.0 0.0 0.0 1.481071308246298 0.0 20 0.0 0.0 0.0 1.5486201685886125 0.0 21 0.0 0.0 0.0 1.6284278961782357 0.0 22 0.0 0.0 0.0 1.7221623641100396 0.0 23 0.0 0.0 0.0 1.8182318543746643 0.0 24 0.0 0.0 0.0 1.8919518451680049 0.0 25 0.0 0.0 0.0 1.9585833753081396 0.0 26 0.0 0.0 0.0 2.025715267376736 0.0 27 0.0 0.0 0.0 2.0908457117314856 0.0 28 0.0 0.0 0.0 2.164065340596365 0.0 29 0.0 0.0 0.0 2.2475423889947064 0.0 30 0.0 0.0 0.0 2.3522014256979213 0.0 31 0.0 0.0 0.0 2.446519649212931 0.0 32 0.0 0.0 0.0 2.5332490501462726 0.0 33 0.0 0.0 0.0 2.619144514532178 0.0 34 0.0 0.0 0.0 2.721385135247829 0.0 35 0.0 0.0 0.0 2.832382089711558 0.0 36 0.0 0.0 0.0 2.9288685482499006 0.0 37 0.0 0.0 0.0 3.0290243275969617 0.0 38 0.0 0.0 0.0 3.1549487462597945 0.0 >>END_MODULE >>Kmer Content warn #Sequence Count PValue Obs/Exp Max Max Obs/Exp Position CCGGATC 20 7.8566186E-4 44.0 31 TTCACGC 20 7.8566186E-4 44.0 20 TACGCAC 30 2.5278077E-6 44.0 2 TCATCGT 25 4.4429562E-5 44.0 17 CGCCCAT 25 4.4429562E-5 44.0 43 CGTTTTT 6905 0.0 42.853004 1 CGGTCTA 145 0.0 42.48276 31 CGTTTGG 105 0.0 39.80952 2 CGTTAGG 150 0.0 39.6 2 ATTAGCG 85 0.0 38.823532 1 CGCATGG 80 0.0 38.5 2 CTCGCGA 35 7.290473E-6 37.714283 14 TAGGGAT 1995 0.0 37.493732 5 ATGGGCG 360 0.0 37.27778 5 TACGGGA 580 0.0 37.172417 4 TATAGCG 95 0.0 37.05263 1 TAAGGGA 1925 0.0 36.914288 4 CGAGGGA 830 0.0 36.843376 4 AGGGATT 2325 0.0 36.71398 6 TATACGG 60 1.9826984E-10 36.666664 2 >>END_MODULE