##FastQC 0.11.5 >>Basic Statistics pass #Measure Value Filename SRR1545867_1.fastq.gz File type Conventional base calls Encoding Illumina 1.5 Total Sequences 2015383 Sequences flagged as poor quality 0 Sequence length 50 %GC 45 >>END_MODULE >>Per base sequence quality pass #Base Mean Median Lower Quartile Upper Quartile 10th Percentile 90th Percentile 1 31.51154991383772 31.0 31.0 33.0 30.0 34.0 2 31.935434108554055 31.0 31.0 34.0 30.0 34.0 3 32.0119902767861 33.0 31.0 34.0 30.0 34.0 4 35.768877677344705 37.0 35.0 37.0 35.0 37.0 5 35.69984464491365 37.0 35.0 37.0 33.0 37.0 6 35.74013276880871 37.0 35.0 37.0 33.0 37.0 7 35.99324942207015 37.0 35.0 37.0 35.0 37.0 8 35.9699392125467 37.0 35.0 37.0 35.0 37.0 9 37.74010696726131 39.0 38.0 39.0 35.0 39.0 10 37.27650129032546 39.0 37.0 39.0 34.0 39.0 11 37.06032600255138 39.0 37.0 39.0 33.0 39.0 12 36.688069215628 39.0 35.0 39.0 33.0 39.0 13 36.551146357789065 39.0 35.0 39.0 32.0 39.0 14 37.63534424970341 40.0 36.0 41.0 33.0 41.0 15 37.71809427786182 40.0 36.0 41.0 33.0 41.0 16 37.79219731435663 40.0 36.0 41.0 33.0 41.0 17 37.68814265080136 40.0 36.0 41.0 33.0 41.0 18 37.57031690750592 39.0 36.0 41.0 33.0 41.0 19 37.46209628641305 39.0 36.0 41.0 32.0 41.0 20 37.29353328870989 39.0 35.0 41.0 32.0 41.0 21 37.19027847312397 39.0 35.0 41.0 32.0 41.0 22 37.116586772836726 39.0 35.0 41.0 32.0 41.0 23 36.997873853257666 39.0 35.0 41.0 32.0 41.0 24 37.05257412610903 39.0 35.0 41.0 32.0 41.0 25 37.021646505899874 39.0 35.0 41.0 32.0 41.0 26 36.79753029573039 39.0 35.0 41.0 31.0 41.0 27 36.795891401287 39.0 35.0 41.0 31.0 41.0 28 36.75133510603195 39.0 35.0 41.0 31.0 41.0 29 36.68389234205112 38.0 35.0 41.0 31.0 41.0 30 36.55696907237979 38.0 35.0 41.0 31.0 41.0 31 36.407393036460064 38.0 35.0 41.0 30.0 41.0 32 36.23243274355296 38.0 35.0 41.0 30.0 41.0 33 35.97634395050469 38.0 35.0 41.0 29.0 41.0 34 35.68420841100674 38.0 35.0 41.0 27.0 41.0 35 35.44400344748368 38.0 35.0 41.0 26.0 41.0 36 35.309416125867884 38.0 34.0 41.0 25.0 41.0 37 35.240143932939795 38.0 34.0 40.0 25.0 41.0 38 35.12866636267151 38.0 34.0 40.0 24.0 41.0 39 34.99188789426129 38.0 34.0 40.0 24.0 41.0 40 34.88706315375291 38.0 34.0 40.0 23.0 41.0 41 34.816678021001465 38.0 34.0 40.0 23.0 41.0 42 34.7950712097899 38.0 34.0 40.0 23.0 41.0 43 34.703483159280395 38.0 34.0 40.0 23.0 41.0 44 34.57907157101157 38.0 34.0 40.0 23.0 41.0 45 34.49424104500236 37.0 34.0 40.0 23.0 41.0 46 34.43771928214141 37.0 34.0 40.0 23.0 41.0 47 34.367335141757174 37.0 33.0 40.0 23.0 41.0 48 34.228106022527726 37.0 33.0 40.0 23.0 41.0 49 34.15930619639046 37.0 33.0 40.0 23.0 41.0 50 34.03462220332314 37.0 33.0 40.0 22.0 41.0 >>END_MODULE >>Per sequence quality scores pass #Quality Count 8 1.0 9 0.0 10 0.0 11 0.0 12 4.0 13 6.0 14 22.0 15 60.0 16 149.0 17 386.0 18 797.0 19 1604.0 20 2812.0 21 4562.0 22 6908.0 23 10097.0 24 14757.0 25 22200.0 26 33207.0 27 42573.0 28 44971.0 29 45747.0 30 49014.0 31 55757.0 32 67184.0 33 86137.0 34 138964.0 35 191780.0 36 145972.0 37 191116.0 38 305987.0 39 552609.0 >>END_MODULE >>Per base sequence content fail #Base G A T C 1 30.86663924425283 23.073778036234305 29.350847952969733 16.708734766543134 2 33.7302636769289 24.4559967013714 28.709034461439835 13.104705160259861 3 28.13495003183018 24.21733238793817 34.60503537044819 13.042682209783452 4 25.50453189294541 26.89037269839033 33.69716823055469 13.907927178109569 5 22.87714047404389 31.03385311873723 31.85240720994471 14.236599197274167 6 21.07902071219217 40.113268793078035 28.742427617976336 10.06528287675345 7 84.96459481895005 3.5812051605079533 9.782011657337588 1.6721883632044132 8 85.74831682116996 2.858067176313386 9.789404793034375 1.6042112094822671 9 80.19498030895367 6.167959142257328 10.996817974548758 2.640242574240231 10 35.37124209145359 37.780411961398904 16.02439834016661 10.823947606980907 11 33.5357100858745 22.137380339121645 28.30251123483725 16.02439834016661 12 30.621077978726625 21.43106297909628 30.809826221616436 17.13803282056066 13 23.944282550760825 25.623814431301646 32.023937881782274 18.407965136155262 14 18.951087708887098 27.99279342933825 34.31749697203956 18.738621889735104 15 19.061835889257775 23.734248031267505 39.1660542934023 18.037861786072423 16 23.210228527282407 21.926403070781085 36.23107865849816 18.632289743438342 17 22.24554836475251 22.271399530511076 32.154334932863875 23.328717171872544 18 23.351640854368625 23.266843076477276 33.46232453087081 19.919191538283293 19 25.548096813360043 24.38156916079971 30.510280179995565 19.560053845844685 20 26.69373513619992 24.12082467699688 30.309425057172756 18.876015129630446 21 24.689302231883467 24.37898900605989 31.908724048977295 19.02298471307935 22 23.717625880539828 22.4001591757001 31.84843774111422 22.033777202645847 23 22.21850635834479 24.885741320632356 31.937552316358726 20.958200004664125 24 21.513429457328954 23.68433196072409 34.664676639626315 20.13756194232064 25 21.48594088567781 25.275394304705358 32.023292843097316 21.215371966519513 26 21.122982579489854 27.04423923393221 30.60331460571018 21.229463580867755 27 20.308001010229816 26.021505589756387 32.378659540146955 21.291833859866834 28 19.447817114662573 25.842631400582423 34.528771950542406 20.180779534212604 29 20.992039726444055 23.94333980191358 33.82290115576047 21.241719315881895 30 22.06250623330652 25.490787607119834 32.619953626680385 19.826752532893252 31 25.187420951749615 24.857210763413207 30.102466876023072 19.852901408814105 32 25.6649480520576 24.90077568382784 30.254249440428943 19.180026823685623 33 24.921317685025627 25.593646468189917 29.26495857115 20.220077275634456 34 21.697166245820274 26.280662286027024 31.393139666256985 20.62903180189572 35 22.60151048212672 26.20886451855553 30.489291613554347 20.7003333857634 36 24.540893715983515 27.65186567515951 28.16263707692285 19.64460353193413 37 22.51576995538813 28.932366701515296 28.5695076320481 19.98235571104847 38 22.40849506024413 29.062168332272325 27.37742652389149 21.15191008359205 39 22.740243417752357 27.761621488322568 28.022961392449968 21.475173701475104 40 23.391137069232002 26.574254124402163 28.17990426633548 21.854704540030355 41 20.6501196050577 26.077872047149352 29.05001183397895 24.221996513814002 42 21.516704269114108 26.614444996310876 28.324541786846467 23.544308947728545 43 21.710860913285465 26.566215950020418 28.765351300472414 22.957571836221703 44 21.80518541636999 27.505888458918232 29.230920375928545 21.458005748783236 45 21.068005436187565 28.594763377482096 27.83282383546949 22.504407350860852 46 21.56413942163847 28.47746557354111 28.670381758702934 21.288013246117487 47 22.014525278817974 26.694429793245256 29.941901861829734 21.349143066107036 48 21.67468912856762 25.850719193324544 30.996540111730624 21.47805156637721 49 21.8311854372097 26.119005667905306 30.433768668287865 21.61604022659713 50 20.600798954838854 27.58631982109604 30.112638639901203 21.700242584163902 >>END_MODULE >>Per sequence GC content fail #GC Content Count 0 851.0 1 2269.0 2 3687.0 3 23069.0 4 42451.0 5 29579.5 6 16708.0 7 15831.5 8 14955.0 9 14608.0 10 14261.0 11 13759.0 12 13257.0 13 12440.0 14 11623.0 15 10723.0 16 9823.0 17 9216.5 18 8610.0 19 9130.5 20 9651.0 21 10044.0 22 10437.0 23 11651.5 24 12866.0 25 14528.0 26 16190.0 27 19879.5 28 23569.0 29 29052.0 30 34535.0 31 39295.5 32 44056.0 33 50206.0 34 56356.0 35 60642.0 36 64928.0 37 71037.5 38 77147.0 39 84806.5 40 92466.0 41 106901.5 42 121337.0 43 129223.0 44 137109.0 45 138286.0 46 139463.0 47 138590.0 48 137717.0 49 137264.5 50 136812.0 51 134110.0 52 131408.0 53 122866.0 54 114324.0 55 109173.5 56 104023.0 57 100736.5 58 97450.0 59 94558.0 60 91666.0 61 83880.0 62 76094.0 63 65251.0 64 54408.0 65 45473.5 66 36539.0 67 29439.5 68 22340.0 69 18963.5 70 15587.0 71 12548.5 72 9510.0 73 7434.5 74 5359.0 75 4045.5 76 2732.0 77 2194.5 78 1657.0 79 1176.0 80 695.0 81 534.5 82 374.0 83 284.0 84 194.0 85 136.0 86 78.0 87 53.5 88 29.0 89 28.0 90 27.0 91 18.5 92 10.0 93 10.0 94 10.0 95 6.0 96 2.0 97 1.5 98 1.0 99 1.0 100 1.0 >>END_MODULE >>Per base N content pass #Base N-Count 1 0.0 2 0.0 3 0.0 4 0.0 5 0.0 6 0.0 7 0.0 8 0.0 9 0.0 10 0.0 11 0.0 12 0.0 13 0.0 14 0.0 15 0.0 16 0.0 17 0.0 18 0.0 19 0.0 20 0.0 21 0.0 22 0.0 23 0.0 24 0.0 25 0.0 26 0.0 27 0.0 28 0.0 29 0.0 30 0.0 31 0.0 32 0.0 33 0.0 34 0.0 35 0.0 36 0.0 37 0.0 38 0.0 39 0.0 40 0.0 41 0.0 42 0.0 43 0.0 44 0.0 45 0.0 46 0.0 47 0.0 48 0.0 49 0.0 50 0.0 >>END_MODULE >>Sequence Length Distribution pass #Length Count 50 2015383.0 >>END_MODULE >>Sequence Duplication Levels fail #Total Deduplicated Percentage 19.830125367770876 #Duplication Level Percentage of deduplicated Percentage of total 1 76.33880722037352 15.138081176060997 2 6.38406244551392 2.5319351730043795 3 2.4649266290015825 1.4663941222637469 4 1.4818874397581316 1.1754405484531505 5 0.9982361982535637 0.9897574479007574 6 0.8334861603681051 0.9916881031440903 7 0.6741128042956629 0.9357418994841813 8 0.6115756928309006 0.9702098128574473 9 0.49632295229937834 0.8857931730298952 >10 7.3346372239388895 34.68534438793519 >50 1.8651439721468686 25.80563991936983 >100 0.5142666793929207 12.93333126303271 >500 0.0017742072785625783 0.22185238670403623 >1k 5.069163653035937E-4 0.13696143039612566 >5k 0.0 0.0 >10k+ 2.5345818265179687E-4 1.1318291563634326 >>END_MODULE >>Overrepresented sequences fail #Sequence Count Percentage Possible Source CGTTTTTTTTTTTTTTTTTTTTTTTTTTTTTTTTTTTTTTTTTTTTTTTT 22519 1.1173558574226339 No Hit >>END_MODULE >>Adapter Content pass #Position Illumina Universal Adapter Illumina Small RNA 3' Adapter Illumina Small RNA 5' Adapter Nextera Transposase Sequence SOLID Small RNA Adapter 1 0.0 0.0 0.0 0.013496194023666966 0.0 2 0.0 0.0 0.0 0.0590954672139241 0.0 3 0.0 0.0 0.0 0.09343137259766505 0.0 4 0.0 0.0 0.0 0.1449352306732765 0.0 5 0.0 0.0 0.0 0.2761261755209804 0.0 6 0.0 0.0 0.0 0.42408812617750574 0.0 7 0.0 0.0 0.0 0.5253591997153891 0.0 8 0.0 0.0 0.0 0.7550922082800142 0.0 9 0.0 0.0 0.0 0.8752678771231076 0.0 10 0.0 0.0 0.0 1.0679359704830298 0.0 11 0.0 0.0 0.0 1.2293941151632222 0.0 12 0.0 0.0 0.0 1.3767110271347927 0.0 13 0.0 0.0 0.0 1.434268325176902 0.0 14 0.0 0.0 0.0 1.458233993240987 0.0 15 0.0 0.0 0.0 1.4914782946963432 0.0 16 0.0 0.0 0.0 1.5572722405617196 0.0 17 0.0 0.0 0.0 1.6398868105962985 0.0 18 0.0 0.0 0.0 1.746566285415725 0.0 19 0.0 0.0 0.0 1.804917477223932 0.0 20 0.0 0.0 0.0 1.8744824184782745 0.0 21 0.0 0.0 0.0 1.9599252350545777 0.0 22 0.0 0.0 0.0 2.0554901971486315 0.0 23 0.0 0.0 0.0 2.1516009612068774 0.0 24 4.961836038112855E-5 0.0 0.0 2.226326211940857 0.0 25 4.961836038112855E-5 0.0 0.0 2.2914751191212788 0.0 26 4.961836038112855E-5 0.0 0.0 2.355582040733697 0.0 27 4.961836038112855E-5 0.0 0.0 2.4308034750714875 0.0 28 4.961836038112855E-5 0.0 0.0 2.5086050641490973 0.0 29 4.961836038112855E-5 0.0 0.0 2.598066967916272 0.0 30 4.961836038112855E-5 0.0 0.0 2.7040517856903628 0.0 31 4.961836038112855E-5 0.0 0.0 2.7929182691329637 0.0 32 4.961836038112855E-5 0.0 0.0 2.8835213951889047 0.0 33 4.961836038112855E-5 0.0 0.0 2.9731321540372226 0.0 34 4.961836038112855E-5 0.0 0.0 3.0728650584032913 0.0 35 4.961836038112855E-5 0.0 0.0 3.1888231666139886 0.0 36 4.961836038112855E-5 0.0 0.0 3.2905904237556833 0.0 37 4.961836038112855E-5 0.0 0.0 3.39201035237471 0.0 38 4.961836038112855E-5 0.0 0.0 3.517544804138965 0.0 >>END_MODULE >>Kmer Content warn #Sequence Count PValue Obs/Exp Max Max Obs/Exp Position TATACGA 20 7.857897E-4 44.0 12 CGTTTTT 13200 0.0 42.550003 1 ACGGGTA 125 0.0 42.24 5 CGACGGT 275 0.0 38.4 28 AGGGATC 2540 0.0 38.196854 6 TATTACG 75 0.0 38.133335 1 TACGGGA 1080 0.0 38.09259 4 ATAGGGA 3465 0.0 37.015873 4 CGAGGGA 1600 0.0 36.712498 4 TTTAGCG 120 0.0 36.666664 1 ATTACGC 30 1.3014434E-4 36.666664 12 CACGTAA 30 1.3014434E-4 36.666664 40 GTTTTTT 16160 0.0 36.566833 2 ACGGGAT 1050 0.0 36.45714 5 CACGACG 285 0.0 36.280704 26 CGGGTAT 140 0.0 36.142857 6 GCGTTAG 140 0.0 36.142857 1 TAGGGAT 3755 0.0 36.090546 5 AAGGGAT 3285 0.0 36.03044 5 AAGGGCG 690 0.0 36.028984 5 >>END_MODULE