##FastQC 0.11.5 >>Basic Statistics pass #Measure Value Filename SRR1545863_1.fastq.gz File type Conventional base calls Encoding Illumina 1.5 Total Sequences 1725206 Sequences flagged as poor quality 0 Sequence length 50 %GC 45 >>END_MODULE >>Per base sequence quality pass #Base Mean Median Lower Quartile Upper Quartile 10th Percentile 90th Percentile 1 31.491801558770373 31.0 31.0 33.0 30.0 34.0 2 31.91191602626005 31.0 31.0 34.0 30.0 34.0 3 32.02643336505901 33.0 31.0 34.0 30.0 34.0 4 35.778389363357185 37.0 35.0 37.0 35.0 37.0 5 35.7022709172122 37.0 35.0 37.0 33.0 37.0 6 35.75153923647379 37.0 35.0 37.0 33.0 37.0 7 35.96126491561008 37.0 35.0 37.0 35.0 37.0 8 35.93414641497885 37.0 35.0 37.0 35.0 37.0 9 37.697728850931426 39.0 37.0 39.0 35.0 39.0 10 37.27449417634764 39.0 37.0 39.0 34.0 39.0 11 37.05032268610241 39.0 37.0 39.0 33.0 39.0 12 36.54860926753095 39.0 35.0 39.0 33.0 39.0 13 36.34486606237168 39.0 35.0 39.0 32.0 39.0 14 37.440807068836996 40.0 35.0 41.0 33.0 41.0 15 37.54910891800747 40.0 35.0 41.0 33.0 41.0 16 37.645027898117675 40.0 35.0 41.0 33.0 41.0 17 37.58105524789504 39.0 35.0 41.0 33.0 41.0 18 37.47500472407353 39.0 36.0 41.0 33.0 41.0 19 37.3867138185237 39.0 36.0 41.0 32.0 41.0 20 37.22952911130613 39.0 35.0 41.0 32.0 41.0 21 37.126798770697526 39.0 35.0 41.0 32.0 41.0 22 37.021950422152486 39.0 35.0 41.0 32.0 41.0 23 36.90435808825149 38.0 35.0 41.0 32.0 41.0 24 36.97662713901992 39.0 35.0 41.0 32.0 41.0 25 36.93420264014848 38.0 35.0 41.0 32.0 41.0 26 36.704010999266174 38.0 35.0 41.0 31.0 41.0 27 36.68815666071182 38.0 35.0 41.0 31.0 41.0 28 36.669026191654794 38.0 35.0 41.0 31.0 41.0 29 36.63361013119593 38.0 35.0 41.0 31.0 41.0 30 36.54331888481723 38.0 35.0 41.0 31.0 41.0 31 36.409298367847086 38.0 35.0 41.0 31.0 41.0 32 36.23851586419245 38.0 35.0 41.0 30.0 41.0 33 36.02004456279424 38.0 35.0 41.0 30.0 41.0 34 35.801391254145884 38.0 35.0 41.0 29.0 41.0 35 35.57578689153643 38.0 35.0 41.0 27.0 41.0 36 35.43220287896054 38.0 35.0 40.0 27.0 41.0 37 35.3538841158679 38.0 34.0 40.0 26.0 41.0 38 35.28255466303734 38.0 34.0 40.0 26.0 41.0 39 35.181091417488695 38.0 34.0 40.0 26.0 41.0 40 35.037441905488386 38.0 34.0 40.0 25.0 41.0 41 35.00219857802489 38.0 34.0 40.0 24.0 41.0 42 34.979636055056616 38.0 34.0 40.0 24.0 41.0 43 34.89545074617176 38.0 34.0 40.0 24.0 41.0 44 34.78988538180368 37.0 34.0 40.0 24.0 41.0 45 34.69090184012808 37.0 34.0 40.0 23.0 41.0 46 34.627413190077014 37.0 34.0 40.0 23.0 41.0 47 34.55671496621273 37.0 34.0 40.0 23.0 41.0 48 34.45425241971104 37.0 34.0 40.0 23.0 41.0 49 34.37474191487857 37.0 34.0 40.0 24.0 41.0 50 34.240635611051665 36.0 33.0 40.0 23.0 41.0 >>END_MODULE >>Per sequence quality scores pass #Quality Count 8 1.0 9 1.0 10 0.0 11 1.0 12 7.0 13 8.0 14 16.0 15 34.0 16 99.0 17 305.0 18 624.0 19 1207.0 20 2049.0 21 3530.0 22 5454.0 23 7910.0 24 11559.0 25 17737.0 26 25855.0 27 32827.0 28 35987.0 29 37094.0 30 40723.0 31 47620.0 32 58230.0 33 76097.0 34 130013.0 35 198758.0 36 120567.0 37 156587.0 38 250941.0 39 463365.0 >>END_MODULE >>Per base sequence content fail #Base G A T C 1 32.46139881266353 23.033713075424036 28.868784365461288 15.63610374645115 2 32.0216252435941 25.085526018342158 30.294527146323396 12.59832159174035 3 29.448831038148487 23.82260437304299 33.526662902864935 13.201901685943593 4 26.537932281710123 27.293842010751177 32.343615776898524 13.824609930640166 5 23.041886012453006 32.36633770112091 31.27197563653268 13.319800649893404 6 21.15335791783706 40.4990476499618 27.95967554019636 10.387918892004782 7 86.01453971293863 4.085483124913778 8.235596212858058 1.664380949289534 8 86.99575586915418 3.4049846800903776 8.116595931152569 1.4826635196028763 9 80.86941501478664 6.54889908799297 9.730490155958186 2.851195741262203 10 38.06026642615433 37.584033442962756 14.173553766912473 10.182146363970448 11 37.55481954039112 21.625011737728713 25.52002485500282 15.300143866877347 12 35.735152787551165 20.725756808172473 27.552767611520018 15.986322792756344 13 23.020787082817936 31.175175602217937 28.271870141884502 17.53216717307962 14 17.220957960962345 34.037906197868544 30.62161851975938 18.119517321409734 15 17.435367138764878 23.932678184518256 40.99898794694663 17.632966729770242 16 19.622062524707196 21.653356178914287 39.65665549505392 19.067925801324595 17 19.427650958784053 21.876402006485023 30.696218306683377 27.99972872804755 18 21.55922249285013 23.641988261112008 33.521504098640975 21.277285147396892 19 26.087725176007964 24.409896557280696 28.73923461893826 20.763143647773077 20 27.915622829969287 23.605239026527848 29.134665657318603 19.34447248618426 21 24.20696426977416 25.33030838056441 29.551601373980844 20.911125975680587 22 23.24307937718742 23.617585378209906 29.164806985368703 23.97452825923397 23 21.448800896820437 26.808740521421793 29.40193808739362 22.340520494364153 24 20.675212119596154 23.44351920872058 35.680898397060986 20.200370274622276 25 19.599862277316447 25.429137158113292 33.40882190300752 21.562178661562736 26 20.08415226935218 29.97960823229226 28.979032069213762 20.957207429141793 27 19.7901004285865 28.96767110710257 30.591998868540916 20.65022959577001 28 17.88980562321253 27.17727622092666 35.68565145263812 19.24726670322269 29 19.464863906107443 24.188357796112463 34.538136315315384 21.808641982464703 30 20.286041203195445 27.90982642072889 31.257774433893694 20.546357942181977 31 25.130390225862882 25.812859449828018 28.603656606805217 20.453093717503883 32 25.868215158073877 26.157629871447234 29.044821314092346 18.92933365638654 33 24.951918785350852 27.163248910564885 27.810186145886345 20.074646158197922 34 20.481785943243878 26.717505039977834 30.293483792660126 22.507225224118162 35 21.873387873680013 25.09677105226854 31.012180574377783 22.01766049967366 36 25.307818312711643 26.893078275869662 27.36334095754362 20.43576245387507 37 21.46763922685175 30.44135019238282 28.194719934894728 19.896290645870696 38 20.921559512313312 29.910225213684626 27.058449831498383 22.10976544250368 39 22.603155797046846 29.14880889586519 27.153684835318217 21.094350471769747 40 23.030930798988642 27.746077859687478 27.17739214911147 22.04559919221241 41 19.38284471535573 26.80108926122446 28.68161831108865 25.134447712331166 42 21.549542489418656 26.930696971839886 27.12789081419842 24.39186972454304 43 22.027572359474753 26.80520471178514 27.552187970595977 23.61503495814413 44 21.06797680972591 28.595889418423077 28.345600467422443 21.990533304428574 45 19.79618665828892 32.039478184054545 25.79349944296507 22.370835714691463 46 21.30557162449006 30.433467075815873 27.24521013722419 21.015751162469872 47 21.80128054272939 26.905192771182108 28.87463873879409 22.41888794729441 48 21.707204820757635 25.55399181315159 30.70271028503263 22.036093081058148 49 20.97790061013004 26.09050745244336 30.662367276719415 22.269224660707184 50 19.827371340002294 29.074151144848788 28.889477546449527 22.208999968699388 >>END_MODULE >>Per sequence GC content fail #GC Content Count 0 650.0 1 1650.5 2 2651.0 3 14331.5 4 26012.0 5 18912.5 6 11813.0 7 11387.0 8 10961.0 9 10837.5 10 10714.0 11 10336.0 12 9958.0 13 9396.0 14 8834.0 15 8048.5 16 7263.0 17 6897.0 18 6531.0 19 6489.0 20 6447.0 21 6679.0 22 6911.0 23 7821.0 24 8731.0 25 11765.0 26 14799.0 27 18400.0 28 22001.0 29 27858.0 30 33715.0 31 38150.5 32 42586.0 33 45036.5 34 47487.0 35 52233.5 36 56980.0 37 59793.0 38 62606.0 39 70480.5 40 78355.0 41 95590.0 42 112825.0 43 125833.0 44 138841.0 45 139736.0 46 140631.0 47 131192.5 48 121754.0 49 123751.0 50 125748.0 51 118915.5 52 112083.0 53 103716.0 54 95349.0 55 90098.0 56 84847.0 57 79645.0 58 74443.0 59 71557.5 60 68672.0 61 63278.5 62 57885.0 63 50079.0 64 42273.0 65 33394.0 66 24515.0 67 20849.5 68 17184.0 69 15166.5 70 13149.0 71 10830.5 72 8512.0 73 6735.0 74 4958.0 75 3842.0 76 2726.0 77 2191.0 78 1656.0 79 1159.0 80 662.0 81 459.5 82 257.0 83 190.5 84 124.0 85 95.0 86 66.0 87 43.0 88 20.0 89 16.5 90 13.0 91 7.5 92 2.0 93 2.5 94 3.0 95 2.5 96 2.0 97 1.5 98 1.0 99 0.5 100 0.0 >>END_MODULE >>Per base N content pass #Base N-Count 1 0.0 2 0.0 3 0.0 4 0.0 5 0.0 6 0.0 7 0.0 8 0.0 9 0.0 10 0.0 11 0.0 12 0.0 13 0.0 14 0.0 15 0.0 16 0.0 17 0.0 18 0.0 19 0.0 20 0.0 21 0.0 22 0.0 23 0.0 24 0.0 25 0.0 26 0.0 27 0.0 28 0.0 29 0.0 30 0.0 31 0.0 32 0.0 33 0.0 34 0.0 35 0.0 36 0.0 37 0.0 38 0.0 39 0.0 40 0.0 41 0.0 42 0.0 43 0.0 44 0.0 45 0.0 46 0.0 47 0.0 48 0.0 49 0.0 50 0.0 >>END_MODULE >>Sequence Length Distribution pass #Length Count 50 1725206.0 >>END_MODULE >>Sequence Duplication Levels fail #Total Deduplicated Percentage 16.935481731591327 #Duplication Level Percentage of deduplicated Percentage of total 1 79.10271910418953 13.396426543082022 2 6.760263081931391 2.289766238496007 3 2.202103471422342 1.1188104933404077 4 1.1705778727142901 0.7929720071503159 5 0.7383987426744999 0.6252569208597 6 0.5658327895936531 0.5749590522779202 7 0.46032609897211624 0.5457090967801883 8 0.38269632396768294 0.518491728264148 9 0.32566138935945105 0.49637092591634696 >10 4.912351614507483 20.928326473754417 >50 2.0380479266962195 24.85848730321222 >100 1.335129268921623 31.90278138263859 >500 0.003119460908695281 0.3412790430762795 >1k 0.0024262473734296634 0.8226151547421708 >5k 0.0 0.0 >10k+ 3.4660676763280905E-4 0.7877476364093002 >>END_MODULE >>Overrepresented sequences warn #Sequence Count Percentage Possible Source CGTTTTTTTTTTTTTTTTTTTTTTTTTTTTTTTTTTTTTTTTTTTTTTTT 13420 0.7778781200621839 No Hit GACCAGAAAAATGGTCCTGCCAAGCGGCTACAGTGTTCTTCTTTCAGATA 3246 0.18815144394350589 No Hit AAGGAAGGAAGGAAGAAAGAAAGAAAGAAAGAAAGAAAGAAAGAAAGAAA 2724 0.15789418770859828 No Hit AAGGAAGGAAGAAAGAAAGAAAGAAAGAAAGAAAGAAAGAAAGAAAGAAA 2688 0.15580748038205292 No Hit >>END_MODULE >>Adapter Content pass #Position Illumina Universal Adapter Illumina Small RNA 3' Adapter Illumina Small RNA 5' Adapter Nextera Transposase Sequence SOLID Small RNA Adapter 1 0.0 0.0 0.0 0.0325758199310691 0.0 2 0.0 0.0 0.0 0.09181512236799548 0.0 3 0.0 0.0 0.0 0.12821657239773104 0.0 4 0.0 0.0 0.0 0.17360245675009245 0.0 5 0.0 0.0 0.0 0.2828647709317032 0.0 6 0.0 0.0 0.0 0.39015630597157674 0.0 7 0.0 0.0 0.0 0.46475609289557307 0.0 8 0.0 0.0 0.0 0.6641525707654622 0.0 9 0.0 0.0 0.0 0.751794278480367 0.0 10 0.0 0.0 0.0 0.9167600854622578 0.0 11 0.0 0.0 0.0 1.0716981044582503 0.0 12 0.0 0.0 0.0 1.2284330103187677 0.0 13 5.796409240403755E-5 0.0 0.0 1.287498420478482 0.0 14 5.796409240403755E-5 0.0 0.0 1.3086553142059556 0.0 15 5.796409240403755E-5 0.0 0.0 1.34604215380656 0.0 16 5.796409240403755E-5 0.0 0.0 1.4245255349216268 0.0 17 5.796409240403755E-5 0.0 0.0 1.5208038924047331 0.0 18 5.796409240403755E-5 0.0 0.0 1.6614827446693323 0.0 19 5.796409240403755E-5 0.0 0.0 1.725938815422622 0.0 20 5.796409240403755E-5 0.0 0.0 1.8053496220161533 0.0 21 5.796409240403755E-5 0.0 0.0 1.900526661743583 0.0 22 5.796409240403755E-5 0.0 0.0 2.006542986750568 0.0 23 5.796409240403755E-5 0.0 0.0 2.1144141627144815 0.0 24 5.796409240403755E-5 0.0 0.0 2.199737306733225 0.0 25 5.796409240403755E-5 0.0 0.0 2.2701057149117263 0.0 26 5.796409240403755E-5 0.0 0.0 2.3402422667206118 0.0 27 5.796409240403755E-5 0.0 0.0 2.4106106748991136 0.0 28 5.796409240403755E-5 0.0 0.0 2.4879927382585034 0.0 29 5.796409240403755E-5 0.0 0.0 2.567229652574823 0.0 30 5.796409240403755E-5 0.0 0.0 2.675274720815949 0.0 31 5.796409240403755E-5 0.0 0.0 2.777117631169843 0.0 32 5.796409240403755E-5 0.0 0.0 2.8706716763099593 0.0 33 5.796409240403755E-5 0.0 0.0 2.9601102708893894 0.0 34 5.796409240403755E-5 0.0 0.0 3.0558669515408594 0.0 35 5.796409240403755E-5 0.0 0.0 3.1734181309362475 0.0 36 5.796409240403755E-5 0.0 0.0 3.291259130793656 0.0 37 5.796409240403755E-5 0.0 0.0 3.398086953094297 0.0 38 5.796409240403755E-5 0.0 0.0 3.5050307035797466 0.0 >>END_MODULE >>Kmer Content fail #Sequence Count PValue Obs/Exp Max Max Obs/Exp Position CGCATAC 30 2.5284571E-6 44.0 14 CGTCTAC 20 7.85758E-4 44.0 38 CGCGAAA 25 4.443771E-5 44.0 32 TATAGCG 155 0.0 44.0 1 CGCACTA 30 2.5284571E-6 44.0 28 TGCGTCG 25 4.443771E-5 44.0 1 CGTTTTT 8680 0.0 42.758064 1 GCGTTAG 95 0.0 41.68421 1 CGTTAGG 240 0.0 41.25 2 CGGTCTA 230 0.0 41.130436 31 TCTTACG 70 0.0 40.857143 1 CGTTAAG 70 0.0 40.857143 16 TACGTCT 70 0.0 40.857143 44 ACGGTCT 235 0.0 40.255318 30 ACGGTAC 55 7.8216544E-11 40.0 13 ATCGAGA 50 1.3478711E-9 39.6 23 TACGGGA 690 0.0 39.536232 4 TGCGTAG 140 0.0 39.285713 1 AACGGTC 45 2.3521352E-8 39.11111 28 TATGACG 85 0.0 38.82353 1 >>END_MODULE