##FastQC 0.11.5 >>Basic Statistics pass #Measure Value Filename SRR1545858_1.fastq.gz File type Conventional base calls Encoding Illumina 1.5 Total Sequences 1196442 Sequences flagged as poor quality 0 Sequence length 50 %GC 45 >>END_MODULE >>Per base sequence quality pass #Base Mean Median Lower Quartile Upper Quartile 10th Percentile 90th Percentile 1 31.509636906761884 31.0 31.0 33.0 30.0 34.0 2 31.924782814377963 31.0 31.0 34.0 30.0 34.0 3 32.01869125289818 33.0 31.0 34.0 30.0 34.0 4 35.76557910872403 37.0 35.0 37.0 35.0 37.0 5 35.69583314527574 37.0 35.0 37.0 33.0 37.0 6 35.741086488103896 37.0 35.0 37.0 33.0 37.0 7 35.9819021732771 37.0 35.0 37.0 35.0 37.0 8 35.95911627976952 37.0 35.0 37.0 35.0 37.0 9 37.71403126938038 39.0 38.0 39.0 35.0 39.0 10 37.27500371936124 39.0 37.0 39.0 34.0 39.0 11 37.04371127058395 39.0 37.0 39.0 33.0 39.0 12 36.5544205235189 39.0 35.0 39.0 33.0 39.0 13 36.34621151714835 39.0 35.0 39.0 32.0 39.0 14 37.43218392533863 40.0 35.0 41.0 32.0 41.0 15 37.53057649263399 40.0 35.0 41.0 33.0 41.0 16 37.62126538520045 40.0 35.0 41.0 33.0 41.0 17 37.55444141880676 39.0 35.0 41.0 33.0 41.0 18 37.420957305076215 39.0 36.0 41.0 32.0 41.0 19 37.33189573752844 39.0 36.0 41.0 32.0 41.0 20 37.17847334012012 39.0 35.0 41.0 32.0 41.0 21 37.049988215057645 39.0 35.0 41.0 32.0 41.0 22 36.96013346238263 39.0 35.0 41.0 32.0 41.0 23 36.86908099180737 38.0 35.0 41.0 32.0 41.0 24 36.934418885328334 39.0 35.0 41.0 32.0 41.0 25 36.901064991031745 38.0 35.0 41.0 32.0 41.0 26 36.67641306473695 38.0 35.0 41.0 31.0 41.0 27 36.65897218586442 38.0 35.0 41.0 31.0 41.0 28 36.63388112419992 38.0 35.0 41.0 31.0 41.0 29 36.59680118217181 38.0 35.0 41.0 31.0 41.0 30 36.48571263797159 38.0 35.0 41.0 31.0 41.0 31 36.34181932763978 38.0 35.0 41.0 30.0 41.0 32 36.15948203088825 38.0 35.0 41.0 30.0 41.0 33 35.92755854441753 38.0 35.0 41.0 29.0 41.0 34 35.679829862208116 38.0 35.0 41.0 28.0 41.0 35 35.44946182096583 38.0 35.0 41.0 27.0 41.0 36 35.303591816402296 38.0 34.0 40.0 25.0 41.0 37 35.242986287676295 38.0 34.0 40.0 25.0 41.0 38 35.163475538304404 38.0 34.0 40.0 25.0 41.0 39 35.04430553257074 38.0 34.0 40.0 24.0 41.0 40 34.936717366993136 38.0 34.0 40.0 24.0 41.0 41 34.88145100222159 38.0 34.0 40.0 24.0 41.0 42 34.86542097318549 38.0 34.0 40.0 24.0 41.0 43 34.7855750633963 38.0 34.0 40.0 23.0 41.0 44 34.67046459418844 37.0 34.0 40.0 23.0 41.0 45 34.56995742376145 37.0 34.0 40.0 23.0 41.0 46 34.52017231090182 37.0 34.0 40.0 23.0 41.0 47 34.46884930485556 37.0 34.0 40.0 23.0 41.0 48 34.354909807579475 37.0 34.0 40.0 23.0 41.0 49 34.27320421717058 37.0 34.0 40.0 23.0 41.0 50 34.15198145835736 36.0 33.0 40.0 23.0 41.0 >>END_MODULE >>Per sequence quality scores pass #Quality Count 9 2.0 10 2.0 11 1.0 12 1.0 13 3.0 14 12.0 15 37.0 16 95.0 17 191.0 18 481.0 19 931.0 20 1638.0 21 2587.0 22 4063.0 23 5766.0 24 8621.0 25 13205.0 26 19272.0 27 24227.0 28 25961.0 29 26408.0 30 28627.0 31 33128.0 32 40550.0 33 52220.0 34 89020.0 35 133163.0 36 82293.0 37 108054.0 38 173330.0 39 322553.0 >>END_MODULE >>Per base sequence content fail #Base G A T C 1 32.764897922339735 22.767505654264895 28.72182688337588 15.745769540019491 2 33.137669857795025 24.60955065101359 29.309820283808158 12.942959207383225 3 28.327658173150056 24.472728306094236 33.96403670215523 13.235576818600483 4 26.115515837792387 26.950157216145872 32.406501944933396 14.527825001128344 5 23.29080724347691 30.90889487329933 31.652265634272286 14.148032248951475 6 21.293635629641887 39.735983858808034 28.61007888389074 10.360301627659343 7 85.34947786854691 4.104503185277681 8.917440210223312 1.6285787359520978 8 86.44372230329594 3.0590701429739178 8.807865320675804 1.6893422330543393 9 80.64619931430023 6.182414191410866 10.299872455162891 2.8715140391260086 10 38.067620494766985 36.53833616673437 15.150337417108393 10.243705921390255 11 36.49788288943384 22.079967102458788 26.439977867711097 14.982172140396274 12 33.543456348072034 21.150293954909642 28.90537109195431 16.400878605064015 13 23.47953348344508 29.36866141442711 29.74444227133451 17.407362830793303 14 18.10050131974638 32.404579578450104 32.00940789440692 17.4855112073966 15 18.33962699403732 23.912065942185244 41.16146039674301 16.586846667034425 16 21.596951628244412 21.82220283139509 38.62184711001453 17.958998430345975 17 20.890941641968436 21.4954841103873 31.178109762111326 26.43546448553294 18 22.68559612584647 23.670516414502334 33.96587548748707 19.678011972164132 19 26.36642645443741 24.144839448966184 29.36164059770553 20.127093498890876 20 28.477352015392306 23.66809256111036 29.12953574013617 18.725019683361165 21 24.610720787133854 24.621502755670562 31.260353615135543 19.50742284206004 22 23.674695472074703 23.58116816360509 30.172294185593618 22.57184217872659 23 20.93707843756739 25.996496278131325 30.907808318330517 22.158616965970772 24 21.367604948672813 23.148886448319267 36.45559082680146 19.02791777620645 25 20.46417628267814 25.382425558447462 33.5620949448448 20.591303214029598 26 19.958510316421524 29.10370916433893 29.91971194591965 21.018068573319894 27 19.507339260908594 28.796381270466938 31.76702255520953 19.929256913414942 28 18.095402869508092 27.255729905837473 35.55349945922995 19.095367765424484 29 19.81717458932401 24.34301035904791 34.46243110823592 21.377383943392157 30 21.001268761878972 26.551642286044792 32.37666347386668 20.070425478209557 31 25.521671756758792 25.436920469191154 29.555130963306205 19.486276810743856 32 26.469732757626364 25.60282905481419 29.546772848161467 18.380665339397982 33 25.492752678358 27.024795184388378 28.656550004095475 18.82590213315815 34 22.020373741476813 26.40186486265109 30.863593889214858 20.714167506657237 35 22.000481427432337 26.557910872403344 30.998326705348024 20.443280994816295 36 25.199967904837845 27.523189590469073 27.9745278082849 19.302314696408185 37 21.646515251052705 31.055496212938028 28.598962590748233 18.699025945261035 38 21.696329617315342 30.053608950538347 26.689885510538748 21.560175921607566 39 21.879288757833642 29.16104583423183 27.904570384523446 21.05509502341108 40 23.296741505229672 27.368062973382745 27.56807266879631 21.767122852591267 41 19.468557606637013 26.860976127551524 28.60623415092416 25.064232114887307 42 21.976577218118386 26.870755122270868 27.219790010715105 23.93287764889564 43 22.548105131715538 26.910790493814158 27.811210238356725 22.729894136113575 44 21.243988425682147 28.141606530028202 28.987949269584316 21.626455774705335 45 19.830046086646906 31.387564127638445 26.416742307608725 22.365647478105917 46 21.471161995316113 30.00346025966992 28.08619222661859 20.439185518395377 47 21.415413367300715 27.480479622079468 29.125941750623934 21.978165259995887 48 22.162628861240243 25.352169181623513 31.285427960569756 21.19977399656649 49 21.441323524249402 26.087599733208965 30.80099160678077 21.670085135760864 50 20.19571362422917 29.867473726265043 29.11198369833222 20.82482895117356 >>END_MODULE >>Per sequence GC content fail #GC Content Count 0 288.0 1 1123.5 2 1959.0 3 11042.0 4 20125.0 5 14414.0 6 8703.0 7 8363.5 8 8024.0 9 7949.5 10 7875.0 11 7724.0 12 7573.0 13 7077.0 14 6581.0 15 5983.5 16 5386.0 17 5148.0 18 4910.0 19 4727.5 20 4545.0 21 4662.0 22 4779.0 23 5514.0 24 6249.0 25 7614.0 26 8979.0 27 11723.0 28 14467.0 29 17512.5 30 20558.0 31 24483.0 32 28408.0 33 32267.5 34 36127.0 35 39331.5 36 42536.0 37 45180.0 38 47824.0 39 52722.0 40 57620.0 41 68772.5 42 79925.0 43 85190.5 44 90456.0 45 93157.0 46 95858.0 47 91009.5 48 86161.0 49 84572.5 50 82984.0 51 80448.5 52 77913.0 53 72565.0 54 67217.0 55 62403.5 56 57590.0 57 54696.5 58 51803.0 59 49689.5 60 47576.0 61 43832.5 62 40089.0 63 34003.0 64 27917.0 65 22734.0 66 17551.0 67 14391.5 68 11232.0 69 9357.5 70 7483.0 71 6080.0 72 4677.0 73 3792.5 74 2908.0 75 2259.5 76 1611.0 77 1256.5 78 902.0 79 744.0 80 586.0 81 427.5 82 269.0 83 198.5 84 128.0 85 86.5 86 45.0 87 32.5 88 20.0 89 14.5 90 9.0 91 9.5 92 10.0 93 8.0 94 6.0 95 3.0 96 0.0 97 0.0 98 0.0 99 0.0 100 0.0 >>END_MODULE >>Per base N content pass #Base N-Count 1 0.0 2 0.0 3 0.0 4 0.0 5 0.0 6 0.0 7 0.0 8 0.0 9 0.0 10 0.0 11 0.0 12 0.0 13 0.0 14 0.0 15 0.0 16 0.0 17 0.0 18 0.0 19 0.0 20 0.0 21 0.0 22 0.0 23 0.0 24 0.0 25 0.0 26 0.0 27 0.0 28 0.0 29 0.0 30 0.0 31 0.0 32 0.0 33 0.0 34 0.0 35 0.0 36 0.0 37 0.0 38 0.0 39 0.0 40 0.0 41 0.0 42 0.0 43 0.0 44 0.0 45 0.0 46 0.0 47 0.0 48 0.0 49 0.0 50 0.0 >>END_MODULE >>Sequence Length Distribution pass #Length Count 50 1196442.0 >>END_MODULE >>Sequence Duplication Levels fail #Total Deduplicated Percentage 19.654132346627378 #Duplication Level Percentage of deduplicated Percentage of total 1 77.00780473193707 15.135215859247294 2 5.7456558829562745 2.2585176228360164 3 2.1676153229914874 1.2780779530395645 4 1.3670872556277818 1.0747565540598416 5 0.9272287686112577 0.9111938466942998 6 0.758256511252941 0.8941724294914355 7 0.6432002594747283 0.8849080117570965 8 0.5640439123583127 0.8868634962239818 9 0.5130892357927647 0.9075891371310808 >10 7.851149747369418 37.128423204676665 >50 2.0668504933693206 28.196250311128374 >100 0.38629908367055793 9.328653660674025 >500 8.593972940390611E-4 0.11688370043520988 >1k 4.2969864701953057E-4 0.15480334024403158 >5k 4.2969864701953057E-4 0.8436908723610889 >10k+ 0.0 0.0 >>END_MODULE >>Overrepresented sequences warn #Sequence Count Percentage Possible Source CGTTTTTTTTTTTTTTTTTTTTTTTTTTTTTTTTTTTTTTTTTTTTTTTT 9990 0.8349757029592743 No Hit GACCAGAAAAATGGTCCTGCCAAGCGGCTACAGTGTTCTTCTTTCAGATA 1833 0.15320425060303802 No Hit >>END_MODULE >>Adapter Content pass #Position Illumina Universal Adapter Illumina Small RNA 3' Adapter Illumina Small RNA 5' Adapter Nextera Transposase Sequence SOLID Small RNA Adapter 1 0.0 0.0 0.0 0.01897292137855408 0.0 2 0.0 0.0 0.0 0.06828580073250522 0.0 3 0.0 0.0 0.0 0.10263765397737626 0.0 4 0.0 0.0 0.0 0.14192079515764242 0.0 5 0.0 0.0 0.0 0.2448091925893608 0.0 6 0.0 0.0 0.0 0.3426827209342367 0.0 7 0.0 0.0 0.0 0.40612081488279417 0.0 8 0.0 0.0 0.0 0.567098112570438 0.0 9 0.0 0.0 0.0 0.6383928347550487 0.0 10 0.0 0.0 0.0 0.7659376718637426 0.0 11 0.0 0.0 0.0 0.901589880662832 0.0 12 0.0 0.0 0.0 1.0274630947425785 0.0 13 0.0 0.0 0.0 1.0767759740965295 0.0 14 0.0 0.0 0.0 1.0952474085663995 0.0 15 0.0 0.0 0.0 1.1229963508469278 0.0 16 0.0 0.0 0.0 1.1891926227932486 0.0 17 0.0 0.0 0.0 1.2732752611493077 0.0 18 0.0 0.0 0.0 1.3964738783827382 0.0 19 0.0 0.0 0.0 1.4550642655473478 0.0 20 0.0 0.0 0.0 1.5209262128878793 0.0 21 0.0 0.0 0.0 1.6036715528207803 0.0 22 0.0 0.0 0.0 1.6895093953572342 0.0 23 0.0 0.0 0.0 1.7806128504348728 0.0 24 0.0 0.0 0.0 1.8562537924947469 0.0 25 0.0 0.0 0.0 1.9196918864433044 0.0 26 0.0 0.0 0.0 1.984968765723704 0.0 27 0.0 0.0 0.0 2.049827739246867 0.0 28 0.0 0.0 0.0 2.121206042582925 0.0 29 0.0 0.0 0.0 2.1938380631906935 0.0 30 0.0 0.0 0.0 2.2844400313596482 0.0 31 0.0 0.0 0.0 2.370445036198997 0.0 32 0.0 0.0 0.0 2.4556142295238716 0.0 33 0.0 0.0 0.0 2.539278962122694 0.0 34 0.0 0.0 0.0 2.6313853910177007 0.0 35 0.0 0.0 0.0 2.736697641841393 0.0 36 0.0 0.0 0.0 2.830810018371137 0.0 37 0.0 0.0 0.0 2.934283483862987 0.0 38 0.0 0.0 0.0 3.046031483348127 0.0 >>END_MODULE >>Kmer Content fail #Sequence Count PValue Obs/Exp Max Max Obs/Exp Position TAATACG 30 2.527804E-6 44.000004 1 CTATACG 20 7.8566105E-4 44.000004 1 ATTACGA 20 7.8566105E-4 44.000004 35 TAACGCG 20 7.8566105E-4 44.000004 1 CTCGCGA 20 7.8566105E-4 44.000004 15 GCGATCG 20 7.8566105E-4 44.000004 9 TACCGTA 30 2.527804E-6 44.000004 22 TTGTCGA 25 4.4429496E-5 44.0 32 ATCCCGC 25 4.4429496E-5 44.0 33 ATCGATC 35 1.4461511E-7 44.0 31 CGTTTTT 6925 0.0 42.316246 1 GTATGCG 75 0.0 41.066666 1 TATGACG 60 3.6379788E-12 40.333336 1 TAATGCG 60 3.6379788E-12 40.333336 1 GGCGATA 460 0.0 39.695652 8 CGTTAGG 140 0.0 39.285713 2 CATATCG 45 2.3510438E-8 39.11111 1 ATAGCGG 150 0.0 38.13333 2 AGTACGG 150 0.0 38.13333 2 ACGGGAT 780 0.0 37.79487 5 >>END_MODULE