##FastQC 0.11.5 >>Basic Statistics pass #Measure Value Filename SRR1545854_1.fastq.gz File type Conventional base calls Encoding Illumina 1.5 Total Sequences 258649 Sequences flagged as poor quality 0 Sequence length 50 %GC 44 >>END_MODULE >>Per base sequence quality pass #Base Mean Median Lower Quartile Upper Quartile 10th Percentile 90th Percentile 1 31.51405572803297 31.0 31.0 33.0 30.0 34.0 2 31.93186905806711 31.0 31.0 34.0 30.0 34.0 3 32.01981449763966 33.0 31.0 34.0 30.0 34.0 4 35.77366624266864 37.0 35.0 37.0 35.0 37.0 5 35.68379154761859 37.0 35.0 37.0 33.0 37.0 6 35.73228583911015 37.0 35.0 37.0 33.0 37.0 7 35.98275268800575 37.0 35.0 37.0 35.0 37.0 8 35.959450838781514 37.0 35.0 37.0 35.0 37.0 9 37.74952155237407 39.0 38.0 39.0 35.0 39.0 10 37.3077607104609 39.0 37.0 39.0 34.0 39.0 11 37.0427103913025 39.0 37.0 39.0 33.0 39.0 12 36.22432331074158 38.0 35.0 39.0 32.0 39.0 13 35.89010976265131 38.0 35.0 39.0 32.0 39.0 14 36.91580481656608 39.0 35.0 41.0 32.0 41.0 15 37.11598343701309 39.0 35.0 41.0 32.0 41.0 16 37.27897652803606 39.0 35.0 41.0 33.0 41.0 17 37.19939377302831 39.0 35.0 41.0 32.0 41.0 18 37.125765032921066 38.0 35.0 41.0 32.0 41.0 19 37.008018588898466 38.0 35.0 41.0 32.0 41.0 20 36.822651547077314 38.0 35.0 41.0 32.0 41.0 21 36.67972425951773 38.0 35.0 41.0 32.0 41.0 22 36.565005084110126 38.0 35.0 40.0 32.0 41.0 23 36.49699399572393 38.0 35.0 40.0 31.0 41.0 24 36.54795108428797 38.0 35.0 40.0 32.0 41.0 25 36.5216644951266 38.0 35.0 40.0 32.0 41.0 26 36.297928853388186 38.0 35.0 40.0 31.0 41.0 27 36.2676909634292 38.0 35.0 40.0 31.0 41.0 28 36.26893589381749 37.0 35.0 40.0 31.0 41.0 29 36.26892042884372 37.0 35.0 40.0 31.0 41.0 30 36.174943649501834 37.0 35.0 40.0 31.0 41.0 31 35.9752985706498 37.0 35.0 40.0 30.0 41.0 32 35.75863815441003 37.0 35.0 40.0 30.0 41.0 33 35.537349844770326 37.0 35.0 40.0 29.0 41.0 34 35.32136988737633 37.0 34.0 40.0 28.0 41.0 35 35.114290022385546 37.0 34.0 40.0 27.0 41.0 36 34.9284435663776 37.0 34.0 40.0 25.0 41.0 37 34.83360074850473 37.0 34.0 40.0 25.0 41.0 38 34.79237499468392 37.0 34.0 40.0 25.0 41.0 39 34.71445472435617 37.0 34.0 40.0 24.0 41.0 40 34.58472679190718 37.0 34.0 40.0 23.0 41.0 41 34.58549230810867 36.0 34.0 40.0 23.0 41.0 42 34.56098419093057 36.0 34.0 40.0 23.0 41.0 43 34.459077746289374 36.0 34.0 40.0 23.0 41.0 44 34.33970748002119 36.0 34.0 40.0 23.0 41.0 45 34.23419769649216 36.0 34.0 40.0 23.0 41.0 46 34.2086882222626 36.0 34.0 40.0 23.0 41.0 47 34.171286183205815 35.0 33.0 40.0 23.0 41.0 48 34.096203735564416 35.0 34.0 40.0 23.0 41.0 49 34.05339282193243 36.0 34.0 40.0 23.0 41.0 50 33.86746904105564 35.0 33.0 40.0 23.0 41.0 >>END_MODULE >>Per sequence quality scores pass #Quality Count 10 1.0 11 0.0 12 1.0 13 1.0 14 1.0 15 6.0 16 13.0 17 41.0 18 115.0 19 211.0 20 371.0 21 595.0 22 884.0 23 1305.0 24 1919.0 25 3008.0 26 4307.0 27 5534.0 28 5810.0 29 5831.0 30 6464.0 31 7616.0 32 9217.0 33 12244.0 34 22482.0 35 38893.0 36 15839.0 37 20434.0 38 32810.0 39 62696.0 >>END_MODULE >>Per base sequence content fail #Base G A T C 1 31.661827418625244 23.03159880765052 29.553178245421403 15.753395528302836 2 32.65622523187795 24.85491921484328 29.265143109001002 13.223712444277766 3 28.080526118407573 24.075871161303542 34.40840675974003 13.435195960548851 4 25.591825214866482 26.67669312465929 33.21799040398378 14.513491256490457 5 22.770627375323315 31.17622724232454 32.041492524618306 14.01165285773384 6 20.653859090891515 40.561533197499315 28.560713553889634 10.223894157719535 7 85.12424173300495 4.094738429299939 9.127427517601074 1.6535923200940268 8 87.37362216749341 2.9062551952646247 8.43421006847117 1.2859125687708053 9 82.4066592177043 5.673712250965594 9.802860246898307 2.1167682844317977 10 45.09315713573221 32.355818116443515 14.237054850395712 8.31396989742856 11 44.83450544947013 19.77660845392791 23.785129654473824 11.603756442128136 12 40.89557663087814 21.26201918429996 24.65696755061879 13.18543663420311 13 21.7495524823216 37.47781742825219 26.541761228537514 14.230868860888696 14 14.756291344640807 39.97889031080731 29.96879941542399 15.296018929127891 15 14.25677269194932 23.867480639785967 47.66111602983194 14.21463063843278 16 17.380697392992047 19.345135685813595 46.01332307490074 17.260843846293625 17 17.2013036972886 18.73233610027489 31.78245421401204 32.283905988424465 18 20.728477589319887 22.757868771965096 36.507003699994975 20.00664993872004 19 27.959126074332396 22.199583218956963 29.260503616870743 20.580787089839898 20 29.368758433243507 22.627962992317773 28.039930562267784 19.963348012170933 21 22.45398203743297 26.48183445518831 30.96010423392319 20.104079273455532 22 22.849885365881946 23.829591454055496 28.885478003007936 24.43504517705462 23 19.255438837961872 29.02272964519484 29.120158979930334 22.601672536912957 24 18.697539909297927 23.140626872711668 40.18612095929232 17.97571225869808 25 16.735034738197324 25.54968316134994 37.57254039257836 20.14274170787438 26 16.810813109658262 32.86113613429783 30.078214104829325 20.24983665121458 27 17.353633688898856 32.088660694609295 31.434878928586617 19.12282668790523 28 15.123197847275652 27.24425766192794 40.197719689617976 17.43482480117843 29 16.817385723509467 23.78126341103194 38.56693820583107 20.834412659627528 30 19.11857382011916 28.75479897467224 33.27714392864461 18.84948327656399 31 26.85183395257666 26.099076354441735 27.771613267400998 19.277476425580613 32 28.610588094289945 26.19766556220979 28.645770909611095 16.545975433889172 33 26.640737060649762 26.61831284868683 28.240588596901596 18.500361493761815 34 19.35093505097642 26.808145401683365 31.40510885408411 22.435810693256112 35 19.307633124427312 25.485116895870462 33.75462499371735 21.452624985984865 36 27.950620338760253 25.057896995542222 27.888373819345908 19.103108846351617 37 20.617516402537802 31.53385476069886 29.328936125792097 18.51969271097124 38 20.288885709977613 31.948316057668887 26.389044612583074 21.373753619770422 39 20.88428720002784 30.535590704004267 28.621413575927225 19.958708520040673 40 23.27323902276831 25.925868648245302 26.86923204806514 23.93166028092125 41 17.464208251336753 25.77779152442113 28.513158759554454 28.244841464687664 42 21.596062617678786 25.8423577899006 26.326798093168733 26.23478149925188 43 21.82030473730809 27.74029669552173 26.64692305015678 23.792475517013404 44 20.320975530545258 29.35290683513178 29.05017997363222 21.275937660690744 45 17.546559236648896 35.65179065065011 24.594334406860263 22.20731570584073 46 20.527046305997704 32.33610027488991 27.38034943108228 19.75650398803011 47 21.531109727855124 26.99836457902408 28.753252477295486 22.71727321582531 48 21.817211742554584 24.108734230559563 32.53250544173765 21.541548585148213 49 20.51738069739299 24.731972673391354 32.59977807762643 22.15086855158922 50 19.039702453904713 31.93323770824554 28.579658146754866 20.447401691094882 >>END_MODULE >>Per sequence GC content fail #GC Content Count 0 74.0 1 209.5 2 345.0 3 2277.5 4 4210.0 5 2983.0 6 1756.0 7 1762.0 8 1768.0 9 1824.0 10 1880.0 11 1835.5 12 1791.0 13 1673.0 14 1555.0 15 1444.5 16 1334.0 17 1247.0 18 1160.0 19 1049.5 20 939.0 21 1020.5 22 1102.0 23 1057.5 24 1013.0 25 1608.0 26 2203.0 27 2432.0 28 2661.0 29 3240.0 30 3819.0 31 4697.5 32 5576.0 33 6129.0 34 6682.0 35 7596.5 36 8511.0 37 8947.0 38 9383.0 39 10804.5 40 12226.0 41 15988.0 42 19750.0 43 22946.5 44 26143.0 45 25456.5 46 24770.0 47 23299.5 48 21829.0 49 20732.5 50 19636.0 51 18368.5 52 17101.0 53 15815.0 54 14529.0 55 12514.0 56 10499.0 57 9609.5 58 8720.0 59 8562.0 60 8404.0 61 7339.5 62 6275.0 63 5091.0 64 3907.0 65 3275.5 66 2644.0 67 2146.5 68 1649.0 69 1424.5 70 1200.0 71 955.5 72 711.0 73 576.5 74 442.0 75 319.0 76 196.0 77 166.5 78 137.0 79 109.0 80 81.0 81 51.5 82 22.0 83 12.0 84 2.0 85 4.5 86 7.0 87 4.5 88 2.0 89 3.0 90 4.0 91 2.5 92 1.0 93 0.5 94 0.0 95 0.0 96 0.0 97 0.0 98 0.0 99 0.0 100 0.0 >>END_MODULE >>Per base N content pass #Base N-Count 1 0.0 2 0.0 3 0.0 4 0.0 5 0.0 6 0.0 7 0.0 8 0.0 9 0.0 10 0.0 11 0.0 12 0.0 13 0.0 14 0.0 15 0.0 16 0.0 17 0.0 18 0.0 19 0.0 20 0.0 21 0.0 22 0.0 23 0.0 24 0.0 25 0.0 26 0.0 27 0.0 28 0.0 29 0.0 30 0.0 31 0.0 32 0.0 33 0.0 34 0.0 35 0.0 36 0.0 37 0.0 38 0.0 39 0.0 40 0.0 41 0.0 42 0.0 43 0.0 44 0.0 45 0.0 46 0.0 47 0.0 48 0.0 49 0.0 50 0.0 >>END_MODULE >>Sequence Length Distribution pass #Length Count 50 258649.0 >>END_MODULE >>Sequence Duplication Levels fail #Total Deduplicated Percentage 25.303016829757702 #Duplication Level Percentage of deduplicated Percentage of total 1 70.72395562754026 17.89529439510688 2 5.6260122849372 2.8471016706037915 3 3.008587232221984 2.2837900011212104 4 2.1177764874858664 2.143445364180801 5 1.7739816031537452 2.244354318013988 6 1.4393545824038139 2.1852007933531543 7 1.2590532652874127 2.2300492172790154 8 1.1658466522018152 2.3599549969263367 9 1.0604162210066315 2.414855653801097 >10 11.695137976346912 60.119312272616554 >50 0.12223818109586529 1.9509064407749497 >100 0.0045839317910949485 0.13647839349852503 >500 0.001527977263698316 0.25633194019694644 >1k 0.001527977263698316 0.9329245425267448 >5k 0.0 0.0 >10k+ 0.0 0.0 >>END_MODULE >>Overrepresented sequences warn #Sequence Count Percentage Possible Source CGTTTTTTTTTTTTTTTTTTTTTTTTTTTTTTTTTTTTTTTTTTTTTTTT 2413 0.9329245425267448 No Hit GACCAGAAAAATGGTCCTGCCAAGCGGCTACAGTGTTCTTCTTTCAGATA 663 0.25633194019694644 No Hit >>END_MODULE >>Adapter Content pass #Position Illumina Universal Adapter Illumina Small RNA 3' Adapter Illumina Small RNA 5' Adapter Nextera Transposase Sequence SOLID Small RNA Adapter 1 0.0 0.0 0.0 0.025517206716438107 0.0 2 0.0 0.0 0.0 0.08041786359119889 0.0 3 0.0 0.0 0.0 0.11676055194491376 0.0 4 0.0 0.0 0.0 0.15310324029862865 0.0 5 0.0 0.0 0.0 0.2501459506899311 0.0 6 0.0 0.0 0.0 0.35646764534175657 0.0 7 0.0 0.0 0.0 0.43611226024457855 0.0 8 0.0 0.0 0.0 0.6182123263573415 0.0 9 0.0 0.0 0.0 0.7090690472416287 0.0 10 0.0 0.0 0.0 0.8474805624610959 0.0 11 0.0 0.0 0.0 0.9750665960432865 0.0 12 0.0 0.0 0.0 1.1208239738023345 0.0 13 0.0 0.0 0.0 1.168765392481703 0.0 14 0.0 0.0 0.0 1.1877099853469373 0.0 15 0.0 0.0 0.0 1.2225061763238985 0.0 16 0.0 0.0 0.0 1.2874590661475591 0.0 17 0.0 0.0 0.0 1.3736762949015848 0.0 18 0.0 0.0 0.0 1.5004890797953985 0.0 19 0.0 0.0 0.0 1.560415853144609 0.0 20 0.0 0.0 0.0 1.6261419916566466 0.0 21 0.0 0.0 0.0 1.6992139927082648 0.0 22 0.0 0.0 0.0 1.7815649780204061 0.0 23 0.0 0.0 0.0 1.8643025876767356 0.0 24 0.0 0.0 0.0 1.9373745887283538 0.0 25 0.0 0.0 0.0 1.992661869947303 0.0 26 0.0 0.0 0.0 2.0541351406732677 0.0 27 0.0 0.0 0.0 2.10362305672939 0.0 28 0.0 0.0 0.0 2.1778549308135737 0.0 29 0.0 0.0 0.0 2.2528600535861343 0.0 30 0.0 0.0 0.0 2.340237155372725 0.0 31 0.0 0.0 0.0 2.426454384126751 0.0 32 0.0 0.0 0.0 2.4979798878016153 0.0 33 0.0 0.0 0.0 2.574144883606741 0.0 34 0.0 0.0 0.0 2.658042366295636 0.0 35 0.0 0.0 0.0 2.7651373096358385 0.0 36 0.0 0.0 0.0 2.85483415748756 0.0 37 0.0 0.0 0.0 2.9352520210787594 0.0 38 0.0 0.0 0.0 3.0187628794234658 0.0 >>END_MODULE >>Kmer Content warn #Sequence Count PValue Obs/Exp Max Max Obs/Exp Position GTACATC 20 7.8451546E-4 44.0 20 ATCTAGG 20 7.8451546E-4 44.0 2 CCTAGTG 25 4.4332453E-5 44.0 40 TGGACGA 20 7.8451546E-4 44.0 35 GTTTAAG 30 2.5200825E-6 44.0 1 CGCATGG 25 4.4332453E-5 44.0 2 GTTAGCG 25 4.4332453E-5 44.0 1 GATCAAT 20 7.8451546E-4 44.0 9 AGGGTGT 25 4.4332453E-5 44.0 6 CACGAGA 20 7.8451546E-4 44.0 13 TAACGGG 50 2.7284841E-11 44.0 3 GCGCATG 20 7.8451546E-4 44.0 1 ACGGGAA 100 0.0 44.0 5 TCGGAGA 20 7.8451546E-4 44.0 33 TACGATG 25 4.4332453E-5 44.0 1 TAGGGCG 60 0.0 44.0 5 GCGATCT 20 7.8451546E-4 44.0 9 TTAACGG 30 2.5200825E-6 44.0 2 TCGTAAG 20 7.8451546E-4 44.0 1 CGATGTA 25 4.4332453E-5 44.0 10 >>END_MODULE