##FastQC 0.11.5 >>Basic Statistics pass #Measure Value Filename SRR1545853_1.fastq.gz File type Conventional base calls Encoding Illumina 1.5 Total Sequences 1448888 Sequences flagged as poor quality 0 Sequence length 50 %GC 44 >>END_MODULE >>Per base sequence quality pass #Base Mean Median Lower Quartile Upper Quartile 10th Percentile 90th Percentile 1 31.47717490930976 31.0 31.0 33.0 30.0 34.0 2 31.882633440265913 31.0 31.0 34.0 30.0 34.0 3 31.94412818658171 31.0 31.0 34.0 30.0 34.0 4 35.704425048727025 37.0 35.0 37.0 33.0 37.0 5 35.62531955541077 37.0 35.0 37.0 33.0 37.0 6 35.674984539867815 37.0 35.0 37.0 33.0 37.0 7 35.97487728520079 37.0 35.0 37.0 35.0 37.0 8 35.9594261254148 37.0 35.0 37.0 35.0 37.0 9 37.712486403365894 39.0 38.0 39.0 35.0 39.0 10 37.23221532651247 39.0 37.0 39.0 34.0 39.0 11 36.991559734085726 39.0 37.0 39.0 33.0 39.0 12 36.358184345511866 38.0 35.0 39.0 32.0 39.0 13 36.07506377304526 38.0 35.0 39.0 32.0 39.0 14 37.1228562870284 39.0 35.0 41.0 32.0 41.0 15 37.26499080674282 39.0 35.0 41.0 32.0 41.0 16 37.37658811447123 39.0 35.0 41.0 32.0 41.0 17 37.27855569236546 39.0 35.0 41.0 32.0 41.0 18 37.15979565018138 39.0 35.0 41.0 32.0 41.0 19 37.05249198005643 38.0 35.0 41.0 32.0 41.0 20 36.855057119666945 38.0 35.0 41.0 32.0 41.0 21 36.73280750478988 38.0 35.0 41.0 32.0 41.0 22 36.63478405508224 38.0 35.0 41.0 31.0 41.0 23 36.5688044900641 38.0 35.0 40.0 31.0 41.0 24 36.60773365505132 38.0 35.0 41.0 31.0 41.0 25 36.57436944746592 38.0 35.0 41.0 31.0 41.0 26 36.32872382130296 38.0 35.0 40.0 31.0 41.0 27 36.32901438896588 38.0 35.0 40.0 31.0 41.0 28 36.30500356135188 38.0 35.0 40.0 31.0 41.0 29 36.28801467056115 38.0 35.0 40.0 31.0 41.0 30 36.17202709940313 38.0 35.0 40.0 30.0 41.0 31 35.98116348537637 38.0 35.0 40.0 30.0 41.0 32 35.77055714451359 38.0 35.0 40.0 30.0 41.0 33 35.487929363760344 38.0 35.0 40.0 28.0 41.0 34 35.202150200705645 38.0 34.0 40.0 26.0 41.0 35 34.9473692928646 38.0 34.0 40.0 24.0 41.0 36 34.799100413558534 38.0 34.0 40.0 24.0 41.0 37 34.72532176400108 37.0 34.0 40.0 23.0 41.0 38 34.65062447891072 37.0 34.0 40.0 23.0 41.0 39 34.54987065942985 37.0 34.0 40.0 23.0 41.0 40 34.4501507362888 37.0 34.0 40.0 23.0 41.0 41 34.40687893060057 37.0 34.0 40.0 23.0 41.0 42 34.37304470738939 37.0 34.0 40.0 23.0 41.0 43 34.27127424618052 37.0 33.0 40.0 23.0 41.0 44 34.155764972861945 37.0 33.0 40.0 23.0 41.0 45 34.067257786661216 36.0 33.0 40.0 23.0 41.0 46 34.02245515181298 36.0 33.0 40.0 22.0 41.0 47 33.96747712728658 36.0 33.0 40.0 22.0 41.0 48 33.86229715478353 36.0 33.0 40.0 22.0 41.0 49 33.81301936381556 36.0 33.0 40.0 21.0 41.0 50 33.661504546935305 35.0 33.0 40.0 20.0 41.0 >>END_MODULE >>Per sequence quality scores pass #Quality Count 10 1.0 11 0.0 12 2.0 13 6.0 14 13.0 15 39.0 16 105.0 17 272.0 18 616.0 19 1236.0 20 2284.0 21 3597.0 22 5696.0 23 8378.0 24 11807.0 25 18002.0 26 26536.0 27 33161.0 28 34837.0 29 35515.0 30 38190.0 31 43521.0 32 51748.0 33 67121.0 34 116580.0 35 188458.0 36 93379.0 37 118731.0 38 190543.0 39 358514.0 >>END_MODULE >>Per base sequence content fail #Base G A T C 1 31.661039362600835 22.934484929131855 28.88104532579468 16.52343038247263 2 33.96170028325171 23.85284438824809 29.664266665194273 12.52118866330593 3 28.020799399263435 24.61777583912628 34.454975125751616 12.90644963585867 4 25.07585127352839 26.47478618085042 34.36290451711933 14.086458028501859 5 23.09971509184975 31.324712469148754 32.13395376316181 13.441618675839678 6 20.40751251994633 40.066727034801865 29.221651362976296 10.30410908227551 7 83.88916189519135 4.241183583548211 10.230811491295395 1.6388430299650492 8 84.95252911198105 3.0545494199689696 10.141225546764138 1.8516959212858415 9 79.83557045127021 6.169282925940445 11.375482438946282 2.6196641838430574 10 40.419894429383085 33.7705191843676 16.245009966263783 9.564576419985533 11 39.905430923577256 20.20066423353634 26.419088293919195 13.474816548967208 12 36.4131665111451 20.724997377299005 28.316543445732172 14.545292665823723 13 21.99652423099646 32.521561362921084 29.007487121157745 16.474427284924715 14 16.218575900966812 35.399009447245064 31.833033333149285 16.549381318638844 15 16.393882756983285 23.513756756905984 45.059314453567154 15.033046032543579 16 19.249037882845325 20.207290004472394 42.80027165660838 17.7434004560739 17 18.81574007100618 20.602558651876475 32.16756574697285 28.414135530144495 18 21.39875545935918 22.655857457581263 36.30915571113847 19.636231371921088 19 26.69219428968975 23.438043520272096 30.09114576143912 19.778616428599037 20 28.73921241669473 22.803142824014003 28.908307612458657 19.549337146832606 21 22.284262137584133 26.528896643494875 31.24506518102158 19.94177603789941 22 22.45963801204786 23.056785617659887 31.031522105228287 23.452054265063964 23 20.32896952697517 27.2443418676944 30.591322448664076 21.835366156666353 24 20.311438841373523 22.24851058190833 38.64825990690792 18.791790669810226 25 18.73871548387453 24.42997664415745 36.33821247743097 20.493095394537054 26 17.924228787870423 30.740678368514335 31.264252309357243 20.070840534257997 27 18.354351751136043 29.656536599102207 32.08011937430636 19.908992275455383 28 16.229825907868655 27.243720701669144 38.34485481279437 18.18159857766784 29 17.966330040693276 23.582223056578563 37.707952581566 20.74349432116216 30 19.578946060703103 26.956949053342978 33.506937734317624 19.95716715163629 31 25.910560374576917 26.149226165169427 28.88767109673073 19.052542363522925 32 27.659970957037398 25.882814958782184 29.420976638635977 17.036237445544444 33 26.250131135049777 26.52378927839833 28.534917812833015 18.69116177371888 34 20.28252011197553 27.13211787246495 31.397319875656365 21.188042139903153 35 20.320756331752353 26.088489931588914 32.79314895285212 20.797604783806616 36 26.305207855955743 26.492178829557567 28.577709250128375 18.624904064358322 37 21.342436406402705 30.71721209644914 29.39047048495122 18.549881012196938 38 21.090726129279833 30.69457404575095 27.49039263214272 20.7243071928265 39 21.708786324408788 29.54762548934079 28.718782956308566 20.024805229941858 40 23.002951228804434 26.4844487634655 28.650523711977737 21.862076295752328 41 18.58335495911347 26.87184930788301 28.6995958279729 25.84519990503062 42 20.9439929104251 26.213827431795973 27.50661196724661 25.335567690532322 43 21.226554433468976 26.47402697793066 28.196451347516167 24.102967241084198 44 20.679583239008124 28.206251967025747 29.443959781570417 21.670205012395712 45 18.517649397330917 32.4700045828249 26.380714037247877 22.63163198259631 46 21.200948589539014 31.11185957782796 27.734786953857025 19.952404878776 47 21.323663388750543 27.219909337367692 28.710983871769248 22.745443402112517 48 20.864828751428682 24.572982866860656 32.302979940478494 22.259208441232172 49 20.826385476310108 24.545720580196676 32.965418997189566 21.662474946303647 50 19.03549480705203 29.291843123830137 30.173898879692562 21.49876318942527 >>END_MODULE >>Per sequence GC content fail #GC Content Count 0 440.0 1 1437.0 2 2434.0 3 15530.5 4 28627.0 5 20328.0 6 12029.0 7 11873.5 8 11718.0 9 11727.5 10 11737.0 11 11378.0 12 11019.0 13 10328.0 14 9637.0 15 8819.5 16 8002.0 17 7409.0 18 6816.0 19 6478.5 20 6141.0 21 6700.0 22 7259.0 23 6941.0 24 6623.0 25 8356.0 26 10089.0 27 13055.5 28 16022.0 29 19936.5 30 23851.0 31 27241.5 32 30632.0 33 34812.5 34 38993.0 35 41592.0 36 44191.0 37 49820.0 38 55449.0 39 64140.5 40 72832.0 41 87175.5 42 101519.0 43 118087.5 44 134656.0 45 132728.0 46 130800.0 47 120858.5 48 110917.0 49 107545.0 50 104173.0 51 95470.0 52 86767.0 53 81148.0 54 75529.0 55 69097.0 56 62665.0 57 59366.5 58 56068.0 59 54260.0 60 52452.0 61 47945.5 62 43439.0 63 35999.5 64 28560.0 65 23168.5 66 17777.0 67 14136.5 68 10496.0 69 9058.0 70 7620.0 71 6018.5 72 4417.0 73 3442.0 74 2467.0 75 2153.0 76 1839.0 77 1524.0 78 1209.0 79 881.0 80 553.0 81 393.0 82 233.0 83 180.0 84 127.0 85 80.0 86 33.0 87 26.5 88 20.0 89 11.5 90 3.0 91 3.0 92 3.0 93 3.5 94 4.0 95 2.5 96 1.0 97 0.5 98 0.0 99 0.0 100 0.0 >>END_MODULE >>Per base N content pass #Base N-Count 1 0.0 2 0.0 3 0.0 4 0.0 5 0.0 6 0.0 7 0.0 8 0.0 9 0.0 10 0.0 11 0.0 12 0.0 13 0.0 14 0.0 15 0.0 16 0.0 17 0.0 18 0.0 19 0.0 20 0.0 21 0.0 22 0.0 23 0.0 24 0.0 25 0.0 26 0.0 27 0.0 28 0.0 29 0.0 30 0.0 31 0.0 32 0.0 33 0.0 34 0.0 35 0.0 36 0.0 37 0.0 38 0.0 39 0.0 40 0.0 41 0.0 42 0.0 43 0.0 44 0.0 45 0.0 46 0.0 47 0.0 48 0.0 49 0.0 50 0.0 >>END_MODULE >>Sequence Length Distribution pass #Length Count 50 1448888.0 >>END_MODULE >>Sequence Duplication Levels fail #Total Deduplicated Percentage 18.716665978392566 #Duplication Level Percentage of deduplicated Percentage of total 1 80.16601760000765 15.004405742372832 2 6.579001043736961 2.4627393001424154 3 2.171521016506456 1.2193090059303247 4 1.10256147866901 0.8254509966756186 5 0.6955577549955795 0.6509261084466437 6 0.5533826474608382 0.6214486902457848 7 0.42455274685983585 0.5562348367229221 8 0.35844051625958057 0.5367049132762527 9 0.3065897955811529 0.5164504916648487 >10 4.706346684194633 21.955032199538145 >50 1.7959611167799896 24.165689390936578 >100 1.1378277804827956 30.001222508472207 >500 0.0011199092327586568 0.12325048616969064 >1k 7.466061551724379E-4 0.3094537433364852 >5k 0.0 0.0 >10k+ 3.7330307758621893E-4 1.0516815860692652 >>END_MODULE >>Overrepresented sequences fail #Sequence Count Percentage Possible Source CGTTTTTTTTTTTTTTTTTTTTTTTTTTTTTTTTTTTTTTTTTTTTTTTT 15052 1.0388656680157473 No Hit GACCAGAAAAATGGTCCTGCCAAGCGGCTACAGTGTTCTTCTTTCAGATA 3295 0.22741578369066484 No Hit >>END_MODULE >>Adapter Content pass #Position Illumina Universal Adapter Illumina Small RNA 3' Adapter Illumina Small RNA 5' Adapter Nextera Transposase Sequence SOLID Small RNA Adapter 1 0.0 0.0 0.0 0.039754625616334735 0.0 2 0.0 0.0 0.0 0.1375537653704082 0.0 3 0.0 0.0 0.0 0.1972547222421609 0.0 4 0.0 0.0 0.0 0.28483913180314835 0.0 5 0.0 0.0 0.0 0.4861659424330935 0.0 6 0.0 0.0 0.0 0.6605065401880614 0.0 7 0.0 0.0 0.0 0.7807366752985738 0.0 8 0.0 0.0 0.0 1.1230681736614563 0.0 9 0.0 0.0 0.0 1.2509593564167831 0.0 10 0.0 0.0 0.0 1.4874855751445246 0.0 11 0.0 0.0 0.0 1.6845332420449337 0.0 12 0.0 0.0 0.0 1.8779919496883126 0.0 13 0.0 0.0 0.0 1.9539812601112025 0.0 14 0.0 0.0 0.0 1.981243546775182 0.0 15 0.0 0.0 0.0 2.0306607550065983 0.0 16 0.0 0.0 0.0 2.1444721745228064 0.0 17 0.0 0.0 0.0 2.276987593243922 0.0 18 0.0 0.0 0.0 2.4671334154192732 0.0 19 0.0 0.0 0.0 2.5577546366592863 0.0 20 0.0 0.0 0.0 2.651895798709079 0.0 21 0.0 0.0 0.0 2.7670185687230484 0.0 22 0.0 0.0 0.0 2.8906996261960898 0.0 23 0.0 0.0 0.0 3.030323944984015 0.0 24 0.0 0.0 0.0 3.134955911015896 0.0 25 0.0 0.0 0.0 3.225163021572406 0.0 26 0.0 0.0 0.0 3.3124023388971406 0.0 27 0.0 0.0 0.0 3.402402394111898 0.0 28 0.0 0.0 0.0 3.494818094980426 0.0 29 0.0 0.0 0.0 3.600554356168317 0.0 30 0.0 0.0 0.0 3.731137258366416 0.0 31 0.0 0.0 0.0 3.859166478016244 0.0 32 0.0 0.0 0.0 3.972080657718195 0.0 33 6.901844725058113E-5 0.0 0.0 4.082648210213626 0.0 34 6.901844725058113E-5 0.0 0.0 4.19956545985611 0.0 35 6.901844725058113E-5 0.0 0.0 4.343744996162575 0.0 36 6.901844725058113E-5 0.0 0.0 4.476191396436439 0.0 37 6.901844725058113E-5 0.0 0.0 4.606222151056534 0.0 38 6.901844725058113E-5 0.0 0.0 4.734527444495365 0.0 >>END_MODULE >>Kmer Content fail #Sequence Count PValue Obs/Exp Max Max Obs/Exp Position ACGGGCC 65 0.0 44.000004 5 AACGTAC 30 2.5281752E-6 44.0 43 TAATACG 55 1.8189894E-12 44.0 1 TTATCCG 25 4.443417E-5 44.0 26 TACGAAC 20 7.857162E-4 44.0 30 GTCAACG 55 1.8189894E-12 44.0 1 TGTACCG 35 1.4464422E-7 44.0 1 ATCGCTA 30 2.5281752E-6 44.0 19 TACGTAA 40 8.314601E-9 44.0 16 GTACGAT 20 7.857162E-4 44.0 19 CGTTTTT 9380 0.0 42.92111 1 CGACGGT 155 0.0 42.580647 28 CGGTCTA 155 0.0 42.580647 31 GCGCGAC 220 0.0 40.0 9 ATAGCGG 205 0.0 39.70732 2 AATACGG 135 0.0 39.111115 2 GTTCGAT 85 0.0 38.823532 39 CATACGA 210 0.0 38.7619 18 CGCAAGG 165 0.0 38.666668 2 GGGCGAT 1845 0.0 38.514904 7 >>END_MODULE