##FastQC 0.11.5 >>Basic Statistics pass #Measure Value Filename SRR1545850_1.fastq.gz File type Conventional base calls Encoding Illumina 1.5 Total Sequences 3216965 Sequences flagged as poor quality 0 Sequence length 50 %GC 42 >>END_MODULE >>Per base sequence quality pass #Base Mean Median Lower Quartile Upper Quartile 10th Percentile 90th Percentile 1 31.51751946322077 31.0 31.0 33.0 30.0 34.0 2 31.921247511241184 31.0 31.0 34.0 30.0 34.0 3 31.939220973806055 31.0 31.0 34.0 30.0 34.0 4 35.697810513947154 37.0 35.0 37.0 33.0 37.0 5 35.63314583776945 37.0 35.0 37.0 33.0 37.0 6 35.691910543011815 37.0 35.0 37.0 33.0 37.0 7 36.03735881490784 37.0 35.0 37.0 35.0 37.0 8 36.035781551866435 37.0 35.0 37.0 35.0 37.0 9 37.81170419945508 39.0 38.0 39.0 35.0 39.0 10 37.30001942824992 39.0 37.0 39.0 34.0 39.0 11 37.098374399472796 39.0 37.0 39.0 33.0 39.0 12 36.57359747463836 39.0 35.0 39.0 33.0 39.0 13 36.33013290477204 39.0 35.0 39.0 32.0 39.0 14 37.404156091222625 39.0 35.0 41.0 32.0 41.0 15 37.551921143064966 40.0 35.0 41.0 33.0 41.0 16 37.649975364979106 40.0 35.0 41.0 33.0 41.0 17 37.560770788615976 39.0 35.0 41.0 33.0 41.0 18 37.41586650771768 39.0 36.0 41.0 32.0 41.0 19 37.28353681187082 38.0 36.0 41.0 32.0 41.0 20 37.08947035482201 38.0 35.0 41.0 32.0 41.0 21 36.958027519727445 38.0 35.0 41.0 32.0 41.0 22 36.85301798434239 38.0 35.0 41.0 32.0 41.0 23 36.7679906371378 38.0 35.0 41.0 32.0 41.0 24 36.830876618178934 38.0 35.0 41.0 32.0 41.0 25 36.814441251303634 38.0 35.0 41.0 32.0 41.0 26 36.584951033038905 38.0 35.0 41.0 31.0 41.0 27 36.57116132752454 38.0 35.0 41.0 31.0 41.0 28 36.557022846067646 38.0 35.0 41.0 31.0 41.0 29 36.53184414502489 38.0 35.0 41.0 31.0 41.0 30 36.393350254043796 38.0 35.0 40.0 31.0 41.0 31 36.17937061795823 38.0 35.0 40.0 30.0 41.0 32 35.914354989874 38.0 35.0 41.0 30.0 41.0 33 35.584333680969486 38.0 35.0 41.0 27.0 41.0 34 35.27719760706131 38.0 35.0 40.0 25.0 41.0 35 34.99242080656768 38.0 34.0 40.0 24.0 41.0 36 34.826063385831056 38.0 34.0 40.0 23.0 41.0 37 34.728020976292875 38.0 34.0 40.0 23.0 41.0 38 34.6443296709787 38.0 34.0 40.0 23.0 41.0 39 34.54209790905403 38.0 34.0 40.0 22.0 41.0 40 34.43989816488523 38.0 34.0 40.0 22.0 41.0 41 34.412609089623295 38.0 34.0 40.0 21.0 41.0 42 34.399424612950405 38.0 34.0 40.0 21.0 41.0 43 34.30102410190972 38.0 34.0 40.0 21.0 41.0 44 34.20111720208333 38.0 34.0 40.0 20.0 41.0 45 34.104214686824385 37.0 33.0 40.0 20.0 41.0 46 34.04950660016506 37.0 33.0 40.0 20.0 41.0 47 33.98446423880894 37.0 33.0 40.0 20.0 41.0 48 33.89145669909371 37.0 33.0 40.0 19.0 41.0 49 33.82701925572706 37.0 33.0 40.0 19.0 41.0 50 33.68214232980465 37.0 33.0 40.0 18.0 41.0 >>END_MODULE >>Per sequence quality scores pass #Quality Count 10 1.0 11 3.0 12 4.0 13 7.0 14 17.0 15 51.0 16 166.0 17 481.0 18 1232.0 19 2456.0 20 4527.0 21 7511.0 22 11637.0 23 17867.0 24 27328.0 25 43920.0 26 64827.0 27 78130.0 28 78164.0 29 75457.0 30 80096.0 31 90543.0 32 108943.0 33 138967.0 34 229477.0 35 374905.0 36 207094.0 37 269934.0 38 434622.0 39 868598.0 >>END_MODULE >>Per base sequence content fail #Base G A T C 1 30.684760325337702 22.03399788309789 29.644027833687964 17.637213957876448 2 33.51391762111182 24.576363124870802 29.7733733503473 12.136345903670074 3 26.516048511562918 23.70411241651681 36.90012169855749 12.879717373362782 4 23.85841934867181 26.367834278582453 36.331449052134545 13.442297320611196 5 21.584350466977416 31.482686320802372 33.980195619162785 12.952767593057432 6 19.680599571335094 39.84295757025644 30.738413380313435 9.738029478095036 7 85.05056784888862 2.972926345173168 10.789703960099036 1.1868018458391683 8 86.22328809918666 2.173850197313306 10.320876975658734 1.2819847278413037 9 80.6631094836282 5.708330678139178 11.69670792190776 1.931851916324859 10 31.759375684845807 45.64000540882478 15.735359259426199 6.8652596469032146 11 32.620839828844886 21.264918953112637 32.612664421279064 13.501576796763409 12 31.008108574386107 21.52824168121195 32.895104547298466 14.56854519710348 13 20.292667156776652 31.815733152210235 32.772908626609244 15.118691064403873 14 14.733452182414169 34.974984185404566 34.647035326775395 15.644528305405872 15 14.638144959612553 25.337049050891135 45.515882205743615 14.508923783752698 16 17.632955285494248 23.304325660987917 42.48134499442798 16.581374059089857 17 18.227055625410905 22.221130786315673 33.88762389394973 25.664189694323685 18 19.968914800129937 23.558851277524003 37.575634176933846 18.896599745412214 19 23.66973218546052 24.378474742497975 33.26654160054586 18.685251471495647 20 25.854462202728346 24.275458390128584 31.796304902291446 18.073774504851624 21 21.75078062708174 25.700776974570754 34.00957113304 18.53887126530752 22 20.787543538708068 23.060586608806748 33.660857360897616 22.49101249158757 23 17.55803995380739 27.293706956712306 33.736207885382655 21.41204520409765 24 17.49465723127233 24.548479700587357 40.6883506659227 17.268512402217617 25 16.45631830001259 26.481077661709097 37.73130885788313 19.331295180395188 26 17.30789735045299 31.55579871089676 33.062902456197065 18.073401482453182 27 16.85097599756292 30.45078202591573 34.39723466061956 18.301007315901792 28 15.053225633477515 27.008935440702647 40.46739706524628 17.47044186057355 29 16.740281600825625 23.565285913897107 39.45507644627778 20.239356038999492 30 18.608968391014514 26.699295764796943 36.05696673728188 18.634769106906663 31 24.086273863719377 25.95091957792516 31.412558109895507 18.55024844845996 32 24.362341523765412 26.489408495274276 31.975200227543667 17.173049753416652 33 23.707252021703688 27.376331417966938 30.563776727443415 18.352639832885963 34 19.326881082013635 27.317829071811474 32.27915131187315 21.07613853430174 35 19.154327137534914 27.328335869367553 33.457808835346356 20.05952815775117 36 25.09147597191763 26.318812918387362 30.186091549022137 18.403619560672873 37 19.960863733363592 30.389544182171708 31.158592026957084 18.49100005750762 38 19.904723862398257 30.714602117212962 28.92726529508403 20.45340872530475 39 19.980229812882637 29.75888764720785 30.818364514379237 19.442518025530276 40 22.04982024983175 26.919876343074918 29.800013366635948 21.230290040457387 41 17.808182557161796 26.383625560116446 30.96505557256607 24.84313631015569 42 21.01763618814628 26.694757325615914 28.588001423702153 23.69960506253565 43 20.862210188795963 27.551434348835002 29.330129485400057 22.256225976968974 44 19.715477165589306 29.71390736299587 30.15034356917156 20.420271902243265 45 18.42749299417308 31.942529682480224 28.34628290951254 21.283694413834155 46 20.812722550602818 30.26044734711133 29.82180409174486 19.10502601054099 47 20.178304706454686 27.341640334911943 30.686780863329254 21.793274095304113 48 21.326498734055235 25.457908307985942 31.940322633289455 21.27527032466937 49 20.50780782507736 25.172079895180705 33.05034403544956 21.26976824429237 50 19.095420683781143 29.711234035807045 30.647768937492327 20.545576342919492 >>END_MODULE >>Per sequence GC content fail #GC Content Count 0 667.0 1 1976.5 2 3286.0 3 31652.5 4 60019.0 5 44787.0 6 29555.0 7 29419.5 8 29284.0 9 29970.5 10 30657.0 11 30048.5 12 29440.0 13 28338.5 14 27237.0 15 25367.5 16 23498.0 17 22453.5 18 21409.0 19 20360.5 20 19312.0 21 19555.0 22 19798.0 23 22353.5 24 24909.0 25 30404.5 26 35900.0 27 41353.0 28 46806.0 29 55676.0 30 64546.0 31 76964.0 32 89382.0 33 97818.0 34 106254.0 35 121385.0 36 136516.0 37 137393.5 38 138271.0 39 163987.0 40 189703.0 41 218846.5 42 247990.0 43 273441.5 44 298893.0 45 298086.5 46 297280.0 47 282346.0 48 267412.0 49 256358.5 50 245305.0 51 218027.5 52 190750.0 53 172918.5 54 155087.0 55 133603.0 56 112119.0 57 98992.0 58 85865.0 59 75781.5 60 65698.0 61 57161.0 62 48624.0 63 39945.5 64 31267.0 65 23918.0 66 16569.0 67 13370.0 68 10171.0 69 8394.5 70 6618.0 71 5582.5 72 4547.0 73 3582.5 74 2618.0 75 2048.0 76 1478.0 77 1267.0 78 1056.0 79 903.5 80 751.0 81 467.5 82 184.0 83 179.5 84 175.0 85 104.5 86 34.0 87 22.0 88 10.0 89 9.0 90 8.0 91 5.5 92 3.0 93 2.5 94 2.0 95 1.5 96 1.0 97 1.0 98 1.0 99 0.5 100 0.0 >>END_MODULE >>Per base N content pass #Base N-Count 1 0.0 2 0.0 3 0.0 4 0.0 5 0.0 6 0.0 7 0.0 8 0.0 9 0.0 10 0.0 11 0.0 12 0.0 13 0.0 14 0.0 15 0.0 16 0.0 17 0.0 18 0.0 19 0.0 20 0.0 21 0.0 22 0.0 23 0.0 24 0.0 25 0.0 26 0.0 27 0.0 28 0.0 29 0.0 30 0.0 31 0.0 32 0.0 33 0.0 34 0.0 35 0.0 36 0.0 37 0.0 38 0.0 39 0.0 40 0.0 41 0.0 42 0.0 43 0.0 44 0.0 45 0.0 46 0.0 47 0.0 48 0.0 49 0.0 50 0.0 >>END_MODULE >>Sequence Length Distribution pass #Length Count 50 3216965.0 >>END_MODULE >>Sequence Duplication Levels fail #Total Deduplicated Percentage 18.46456626310255 #Duplication Level Percentage of deduplicated Percentage of total 1 79.5002696526922 14.679379969366558 2 8.3642621221529 3.0888494439290195 3 2.7848393055667815 1.54262549669191 4 1.3698741561675778 1.0117652851467172 5 0.829322616610785 0.7656541203949716 6 0.5548243021931051 0.6146754055334532 7 0.42607768357713227 0.5507137735147442 8 0.33339965257380716 0.49248639816355455 9 0.27210772224484947 0.4521915961282734 >10 3.072166718175897 13.368321425416699 >50 1.0854716313178863 14.477779225022566 >100 1.3981366155966326 46.76768628813779 >500 0.00873405328988655 0.985362789928298 >1k 1.712559468605206E-4 0.03215923613995312 >5k 1.712559468605206E-4 0.2103473341228792 >10k+ 1.712559468605206E-4 0.9600022123626712 >>END_MODULE >>Overrepresented sequences warn #Sequence Count Percentage Possible Source CGTTTTTTTTTTTTTTTTTTTTTTTTTTTTTTTTTTTTTTTTTTTTTTTT 30359 0.9437155828552689 No Hit GACCAGAAAAATGGTCCTGCCAAGCGGCTACAGTGTTCTTCTTTCAGATA 6652 0.20677874953566483 No Hit >>END_MODULE >>Adapter Content warn #Position Illumina Universal Adapter Illumina Small RNA 3' Adapter Illumina Small RNA 5' Adapter Nextera Transposase Sequence SOLID Small RNA Adapter 1 0.0 0.0 0.0 0.04065944143004353 0.0 2 0.0 0.0 0.0 0.145043542593718 0.0 3 0.0 0.0 0.0 0.20718285713397566 0.0 4 0.0 0.0 0.0 0.3176596574721826 0.0 5 0.0 0.0 0.0 0.5580415080673865 0.0 6 3.1085199870063864E-5 0.0 0.0 0.7847769559196324 0.0 7 3.1085199870063864E-5 0.0 0.0 0.9458293764464332 0.0 8 3.1085199870063864E-5 0.0 0.0 1.388669133795363 0.0 9 3.1085199870063864E-5 0.0 0.0 1.58674402736741 0.0 10 3.1085199870063864E-5 0.0 0.0 1.952274892639491 0.0 11 3.1085199870063864E-5 0.0 0.0 2.2335337810638287 0.0 12 3.1085199870063864E-5 0.0 0.0 2.52125839106114 0.0 13 3.1085199870063864E-5 0.0 0.0 2.6266993890203967 0.0 14 3.1085199870063864E-5 0.0 0.0 2.6655558888579765 0.0 15 3.1085199870063864E-5 0.0 0.0 2.728689929794076 0.0 16 3.1085199870063864E-5 0.0 0.0 2.86701906921586 0.0 17 3.1085199870063864E-5 0.0 0.0 3.0598405640098663 0.0 18 3.1085199870063864E-5 0.0 0.0 3.3171949337341253 0.0 19 3.1085199870063864E-5 0.0 0.0 3.440882944017109 0.0 20 3.1085199870063864E-5 0.0 0.0 3.588382217400562 0.0 21 3.1085199870063864E-5 0.0 0.0 3.7637338298675926 0.0 22 3.1085199870063864E-5 0.0 0.0 3.9701395570048166 0.0 23 3.1085199870063864E-5 0.0 0.0 4.177104817739702 0.0 24 3.1085199870063864E-5 0.0 0.0 4.326220521516398 0.0 25 3.1085199870063864E-5 0.0 0.0 4.4519601549908066 0.0 26 3.1085199870063864E-5 0.0 0.0 4.579875752456119 0.0 27 3.1085199870063864E-5 0.0 0.0 4.712329789102461 0.0 28 6.217039974012773E-5 0.0 0.0 4.864460757266554 0.0 29 6.217039974012773E-5 0.0 0.0 5.025451007393615 0.0 30 6.217039974012773E-5 0.0 0.0 5.223712412164882 0.0 31 6.217039974012773E-5 0.0 0.0 5.407332687797349 0.0 32 6.217039974012773E-5 0.0 0.0 5.566893018730387 0.0 33 6.217039974012773E-5 0.0 0.0 5.732732560037178 0.0 34 6.217039974012773E-5 0.0 0.0 5.911534629689785 0.0 35 6.217039974012773E-5 0.0 0.0 6.12798087638504 0.0 36 6.217039974012773E-5 0.0 0.0 6.316512613596977 0.0 37 6.217039974012773E-5 0.0 0.0 6.506225588403977 0.0 38 6.217039974012773E-5 0.0 0.0 6.7009432803900575 0.0 >>END_MODULE >>Kmer Content fail #Sequence Count PValue Obs/Exp Max Max Obs/Exp Position ACATTCG 45 4.802132E-10 44.0 13 CGTCCGA 35 1.4471698E-7 44.0 40 TCGCGAT 25 4.4446322E-5 44.0 28 CGTTTTT 26935 0.0 43.117878 1 CCGTAAG 85 0.0 41.411766 1 TAATGCG 85 0.0 41.411766 1 TATCGCG 165 0.0 41.333332 1 TATTGCG 135 0.0 40.74074 1 TACGGGA 2105 0.0 40.551067 4 CGGTCTA 180 0.0 40.333332 31 TATTACG 110 0.0 40.0 1 TATCCGA 55 7.8216544E-11 40.0 15 TCGGTAC 100 0.0 39.6 36 GCGGATA 95 0.0 39.36842 5 CGTTAGG 510 0.0 39.254898 2 CGACGTA 45 2.3532266E-8 39.11111 21 TCGCGAG 125 0.0 38.72 1 TCTGCGA 40 4.1276144E-7 38.500004 14 CGTTTCG 160 0.0 38.500004 42 TGCGTTC 40 4.1276144E-7 38.500004 24 >>END_MODULE