##FastQC 0.11.5 >>Basic Statistics pass #Measure Value Filename SRR1545849_1.fastq.gz File type Conventional base calls Encoding Illumina 1.5 Total Sequences 3580678 Sequences flagged as poor quality 0 Sequence length 50 %GC 45 >>END_MODULE >>Per base sequence quality pass #Base Mean Median Lower Quartile Upper Quartile 10th Percentile 90th Percentile 1 31.519827809146758 31.0 31.0 33.0 30.0 34.0 2 31.930211540942803 31.0 31.0 34.0 30.0 34.0 3 31.97736881115811 33.0 31.0 34.0 30.0 34.0 4 35.73996405150086 37.0 35.0 37.0 35.0 37.0 5 35.67512716865353 37.0 35.0 37.0 33.0 37.0 6 35.72296336057026 37.0 35.0 37.0 33.0 37.0 7 35.999645039291444 37.0 35.0 37.0 35.0 37.0 8 35.98295685900827 37.0 35.0 37.0 35.0 37.0 9 37.74053070396165 39.0 38.0 39.0 35.0 39.0 10 37.27229368292821 39.0 37.0 39.0 34.0 39.0 11 37.026818105397915 39.0 37.0 39.0 33.0 39.0 12 36.514487200468736 39.0 35.0 39.0 33.0 39.0 13 36.27297260462963 39.0 35.0 39.0 32.0 39.0 14 37.351069546046865 39.0 35.0 41.0 32.0 41.0 15 37.46310754555422 40.0 35.0 41.0 32.0 41.0 16 37.57944864073229 40.0 35.0 41.0 33.0 41.0 17 37.50645352639919 39.0 35.0 41.0 33.0 41.0 18 37.36878295116176 39.0 35.0 41.0 32.0 41.0 19 37.23409253778195 38.0 35.0 41.0 32.0 41.0 20 37.043210810913465 38.0 35.0 41.0 32.0 41.0 21 36.91050074874088 38.0 35.0 41.0 32.0 41.0 22 36.8015959547326 38.0 35.0 41.0 32.0 41.0 23 36.70678988727833 38.0 35.0 41.0 31.0 41.0 24 36.74497287943792 38.0 35.0 41.0 32.0 41.0 25 36.70538317044984 38.0 35.0 41.0 32.0 41.0 26 36.47125293031096 38.0 35.0 41.0 31.0 41.0 27 36.439506987224206 38.0 35.0 41.0 31.0 41.0 28 36.41577879943407 38.0 35.0 41.0 31.0 41.0 29 36.37010085799393 38.0 35.0 40.0 31.0 41.0 30 36.2556624750955 38.0 35.0 40.0 31.0 41.0 31 36.08535003706002 38.0 35.0 40.0 30.0 41.0 32 35.83823510519516 38.0 35.0 40.0 30.0 41.0 33 35.54102267782805 38.0 35.0 40.0 28.0 41.0 34 35.253498359807836 38.0 34.0 40.0 26.0 41.0 35 34.987470529324334 38.0 34.0 40.0 24.0 41.0 36 34.80727811883671 38.0 34.0 40.0 23.0 41.0 37 34.71966454397742 38.0 34.0 40.0 23.0 41.0 38 34.618906251832755 38.0 34.0 40.0 23.0 41.0 39 34.50253052634166 37.0 34.0 40.0 23.0 41.0 40 34.35185989915876 37.0 34.0 40.0 22.0 41.0 41 34.315598889372346 37.0 34.0 40.0 22.0 41.0 42 34.28197341397355 37.0 33.0 40.0 22.0 41.0 43 34.16385025405803 37.0 33.0 40.0 22.0 41.0 44 34.03063693523964 37.0 33.0 40.0 21.0 41.0 45 33.93263761779194 36.0 33.0 40.0 21.0 41.0 46 33.87750951076863 36.0 33.0 40.0 21.0 41.0 47 33.81765660023046 36.0 33.0 40.0 20.0 41.0 48 33.69795105843083 36.0 33.0 40.0 20.0 41.0 49 33.61798910709089 36.0 33.0 40.0 20.0 41.0 50 33.48440211602384 35.0 33.0 40.0 20.0 41.0 >>END_MODULE >>Per sequence quality scores pass #Quality Count 9 2.0 10 4.0 11 4.0 12 12.0 13 16.0 14 31.0 15 72.0 16 228.0 17 671.0 18 1575.0 19 3090.0 20 5508.0 21 8985.0 22 13526.0 23 20218.0 24 29769.0 25 45143.0 26 66173.0 27 84234.0 28 88110.0 29 87516.0 30 91554.0 31 104222.0 32 124958.0 33 160990.0 34 272787.0 35 432258.0 36 246027.0 37 311965.0 38 487199.0 39 893831.0 >>END_MODULE >>Per base sequence content fail #Base G A T C 1 31.826235143176795 21.97941283745704 28.476087489575995 17.71826452979017 2 34.52212122955485 24.92860290704721 28.25300124724982 12.296274616148114 3 27.854864358090843 24.24429116496932 34.812289739540944 13.088554737398894 4 25.41367863851483 26.149405224373705 33.93695272236152 14.499963414749944 5 22.48585323785049 31.283712190819728 32.656245549027304 13.57418902230248 6 20.9546907038276 39.00576929844013 29.687143049444824 10.352396948287447 7 83.25540581979168 4.2321593843400604 10.740982573691351 1.7714522221769173 8 84.39851335417482 3.377405061276105 10.557721191349795 1.6663603931992768 9 78.86389114016954 6.380998235529696 11.971643359162707 2.783467265138055 10 39.60043321404494 32.83266465177824 16.78254788618245 10.784354247994374 11 37.4333855208427 21.04646103335737 27.237551100657477 14.282602345142456 12 34.47768830372348 20.874063515345416 29.161125351120653 15.487122829810444 13 22.492779300456505 30.477747510387697 30.68460777539896 16.344865413756835 14 17.156694905266544 33.624079015203264 32.331335015323916 16.887891064206276 15 16.734121303283903 23.269196504125755 43.35514112131836 16.641541071271977 16 19.151037876067043 20.59372554583238 41.827274052567695 18.427962525532873 17 19.189717701507927 20.522174850684703 32.3625302247228 27.92557722308457 18 21.285242627234283 23.072501911649134 35.3350678279365 20.307187633180085 19 26.008873179883814 22.86078223174494 30.91475971869015 20.215584869681106 20 27.77627588964995 22.338953684190535 30.432588465089573 19.452181961069943 21 23.582321560330193 24.698618529786817 31.44518998915848 20.27386992072451 22 22.764431764040218 22.929791508758957 30.539579375749508 23.766197351451318 23 20.7557618976071 26.467054563409498 30.163170215249735 22.614013323733662 24 20.594395809955547 23.612762722590528 37.05792590118408 18.73491556626985 25 19.327345268130784 24.926592114677725 35.11025006995882 20.635812547232675 26 18.92124899250924 29.781147592718476 30.80564630497353 20.491957109798758 27 19.43229745874943 28.899806126102373 32.344907863817966 19.322988551330223 28 17.700474602854545 26.162754651493376 37.35203221289376 18.784738532758322 29 19.155562158898398 23.472845086880195 36.172255645439215 21.19933710878219 30 20.086140110895197 26.83815746626756 33.29104152900651 19.784660893830722 31 25.69851296318742 25.14493065279816 29.29961867556926 19.85693770844516 32 26.50556682281959 25.27806186426146 30.220952568200772 17.99541874471818 33 25.212403907863255 26.779537283162576 28.533087867716674 19.474970941257492 34 21.137924158497356 27.03348360282606 30.497855434082595 21.330736804593993 35 21.994437924884615 25.798438172882342 30.29644106507203 21.91068283716101 36 25.694714799822826 26.79475786429274 28.354518334237262 19.156009001647174 37 22.19130008339203 30.176352076338613 28.824261773887518 18.80808606638184 38 21.93053941180972 29.767211684491034 26.8301701521332 21.472078751566045 39 22.01988003389302 28.850346219347283 28.44776883037235 20.682004916387342 40 23.298939474591123 26.93506648740825 28.225604201215525 21.540389836785103 41 19.24428837220214 26.71670002161602 28.8227257519386 25.216285854243246 42 22.07671284600291 27.279135403965395 26.484648996642534 24.159502753389162 43 22.8505327761949 26.64165836749353 27.709528754051604 22.798280102259962 44 21.51145676880189 28.697972842014835 28.494324259260395 21.29624612992288 45 19.61335255501891 31.59331836037756 26.63942415374965 22.153904930853876 46 21.507183835016722 30.227264222027223 28.354490406565457 19.911061536390594 47 22.455551713949145 27.077469685908646 29.312046489519584 21.154932110622624 48 22.14547077397074 25.10778684930619 30.598199558854493 22.14854281786857 49 20.7320233765784 25.677762703041157 31.63403690585973 21.956177014520716 50 20.409738044024063 28.551631841790858 29.452466823322286 21.586163290862793 >>END_MODULE >>Per sequence GC content fail #GC Content Count 0 1277.0 1 4070.5 2 6864.0 3 41732.0 4 76600.0 5 54644.5 6 32689.0 7 31820.0 8 30951.0 9 30775.5 10 30600.0 11 29274.0 12 27948.0 13 26472.0 14 24996.0 15 23450.0 16 21904.0 17 20594.0 18 19284.0 19 18235.5 20 17187.0 21 17677.0 22 18167.0 23 19324.0 24 20481.0 25 24651.5 26 28822.0 27 36328.0 28 43834.0 29 51301.5 30 58769.0 31 65801.0 32 72833.0 33 76863.0 34 80893.0 35 94956.5 36 109020.0 37 115663.5 38 122307.0 39 137947.0 40 153587.0 41 191764.0 42 229941.0 43 256741.5 44 283542.0 45 284112.5 46 284683.0 47 269431.5 48 254180.0 49 260675.5 50 267171.0 51 255738.0 52 244305.0 53 224673.5 54 205042.0 55 189492.0 56 173942.0 57 161470.5 58 148999.0 59 144280.0 60 139561.0 61 125187.5 62 110814.0 63 97812.0 64 84810.0 65 69687.0 66 54564.0 67 44545.5 68 34527.0 69 30089.5 70 25652.0 71 20106.5 72 14561.0 73 12635.0 74 10709.0 75 8861.5 76 7014.0 77 5706.5 78 4399.0 79 3009.0 80 1619.0 81 1225.0 82 831.0 83 593.5 84 356.0 85 282.0 86 208.0 87 167.0 88 126.0 89 90.0 90 54.0 91 48.0 92 42.0 93 25.0 94 8.0 95 6.0 96 4.0 97 2.5 98 1.0 99 0.5 100 0.0 >>END_MODULE >>Per base N content pass #Base N-Count 1 0.0 2 0.0 3 0.0 4 0.0 5 0.0 6 0.0 7 0.0 8 0.0 9 0.0 10 0.0 11 0.0 12 0.0 13 0.0 14 0.0 15 0.0 16 0.0 17 0.0 18 0.0 19 0.0 20 0.0 21 0.0 22 0.0 23 0.0 24 0.0 25 0.0 26 0.0 27 0.0 28 0.0 29 0.0 30 0.0 31 0.0 32 0.0 33 0.0 34 0.0 35 0.0 36 0.0 37 0.0 38 0.0 39 0.0 40 0.0 41 0.0 42 0.0 43 0.0 44 0.0 45 0.0 46 0.0 47 0.0 48 0.0 49 0.0 50 0.0 >>END_MODULE >>Sequence Length Distribution pass #Length Count 50 3580678.0 >>END_MODULE >>Sequence Duplication Levels fail #Total Deduplicated Percentage 16.575126736352995 #Duplication Level Percentage of deduplicated Percentage of total 1 80.2485075920674 13.301291837417029 2 7.862260546028102 2.606359299692874 3 2.5616502151258445 1.2737903090975036 4 1.2857382105678319 0.8524509515973413 5 0.7558867651648082 0.6264459465469296 6 0.5172699952041859 0.5144289436453252 7 0.3727159617830571 0.43244700122511104 8 0.3033961679571504 0.4023063948170887 9 0.25878547012306063 0.38604617683347797 >10 2.934493054693358 11.696255194066808 >50 1.243627808264291 15.038606298740362 >100 1.6402666842319928 49.528096637314846 >500 0.013005735421854703 1.360512790796097 >1k 0.0020535371718717953 0.5949211982520033 >5k 1.7112809765598296E-4 0.1927097654679179 >10k+ 1.7112809765598296E-4 1.1933312544893693 >>END_MODULE >>Overrepresented sequences fail #Sequence Count Percentage Possible Source CGTTTTTTTTTTTTTTTTTTTTTTTTTTTTTTTTTTTTTTTTTTTTTTTT 42071 1.1749450802334083 No Hit GACCAGAAAAATGGTCCTGCCAAGCGGCTACAGTGTTCTTCTTTCAGATA 6794 0.18974060219880146 No Hit >>END_MODULE >>Adapter Content pass #Position Illumina Universal Adapter Illumina Small RNA 3' Adapter Illumina Small RNA 5' Adapter Nextera Transposase Sequence SOLID Small RNA Adapter 1 0.0 0.0 0.0 0.020247562053890354 0.0 2 0.0 0.0 0.0 0.0858496631084951 0.0 3 0.0 0.0 0.0 0.13553299123797224 0.0 4 0.0 0.0 0.0 0.2076143121498219 0.0 5 0.0 0.0 0.0 0.3668020414010978 0.0 6 0.0 0.0 0.0 0.5221078242723864 0.0 7 0.0 0.0 0.0 0.6330365366559071 0.0 8 0.0 0.0 0.0 0.9056106134089689 0.0 9 0.0 0.0 0.0 1.043992227170385 0.0 10 0.0 0.0 0.0 1.2904260031200796 0.0 11 0.0 0.0 0.0 1.527113021612108 0.0 12 0.0 0.0 0.0 1.7344759847157438 0.0 13 0.0 0.0 0.0 1.814740113464545 0.0 14 0.0 0.0 0.0 1.844790288319698 0.0 15 0.0 0.0 0.0 1.8948646038543537 0.0 16 0.0 0.0 0.0 2.0091446368536907 0.0 17 0.0 0.0 0.0 2.1388686723575816 0.0 18 0.0 0.0 0.0 2.3235822936326582 0.0 19 0.0 0.0 0.0 2.407616658074253 0.0 20 0.0 0.0 0.0 2.5067598929588195 0.0 21 0.0 0.0 0.0 2.621905683783909 0.0 22 0.0 0.0 0.0 2.7463793169896875 0.0 23 0.0 0.0 0.0 2.8802366479197516 0.0 24 0.0 0.0 0.0 2.981809590250785 0.0 25 0.0 0.0 0.0 3.069502479697979 0.0 26 0.0 0.0 0.0 3.1547098063551093 0.0 27 0.0 0.0 0.0 3.236314463350237 0.0 28 0.0 0.0 0.0 3.329006406049357 0.0 29 0.0 0.0 0.0 3.425608222800263 0.0 30 0.0 0.0 0.0 3.547205305810799 0.0 31 0.0 0.0 0.0 3.6608430023587712 0.0 32 0.0 0.0 0.0 3.7694816456548175 0.0 33 0.0 0.0 0.0 3.8670050755750727 0.0 34 0.0 0.0 0.0 3.979218460861323 0.0 35 0.0 0.0 0.0 4.119973926725609 0.0 36 0.0 0.0 0.0 4.243023248669665 0.0 37 0.0 0.0 0.0 4.36811129065501 0.0 38 0.0 0.0 0.0 4.492501140845393 0.0 >>END_MODULE >>Kmer Content warn #Sequence Count PValue Obs/Exp Max Max Obs/Exp Position ACCGGAT 25 4.4447326E-5 44.0 16 CGTTTTT 26405 0.0 42.758568 1 CGGTCTA 530 0.0 41.92453 31 ACGAGTT 70 0.0 40.857143 36 TACGGGA 1535 0.0 40.130295 4 CTACGGG 720 0.0 40.02778 3 TGATTCG 350 0.0 39.600002 15 CACGACG 570 0.0 39.36842 26 CGAGTTA 45 2.3534085E-8 39.11111 39 CTACCGT 40 4.1277963E-7 38.500004 42 CATACGA 715 0.0 38.46154 18 CGACGGT 590 0.0 38.40678 28 CGTAAGG 580 0.0 38.31035 2 TCGACAA 535 0.0 37.83178 19 AAGGGAT 4520 0.0 37.81858 5 GCGTAAG 390 0.0 37.794872 1 TACGTCG 35 7.294526E-6 37.714287 16 TGCGTAT 35 7.294526E-6 37.714287 14 ACGGTAC 35 7.294526E-6 37.714287 13 CGACAAT 540 0.0 37.48148 20 >>END_MODULE