##FastQC 0.11.5 >>Basic Statistics pass #Measure Value Filename SRR1545848_1.fastq.gz File type Conventional base calls Encoding Illumina 1.5 Total Sequences 602632 Sequences flagged as poor quality 0 Sequence length 50 %GC 45 >>END_MODULE >>Per base sequence quality pass #Base Mean Median Lower Quartile Upper Quartile 10th Percentile 90th Percentile 1 31.48067311394018 31.0 31.0 33.0 30.0 34.0 2 31.880376415457526 31.0 31.0 34.0 30.0 34.0 3 31.95713138366366 33.0 31.0 34.0 30.0 34.0 4 35.72307311925022 37.0 35.0 37.0 33.0 37.0 5 35.646372910831154 37.0 35.0 37.0 33.0 37.0 6 35.694695933836904 37.0 35.0 37.0 33.0 37.0 7 35.962287100585435 37.0 35.0 37.0 35.0 37.0 8 35.95214492426555 37.0 35.0 37.0 35.0 37.0 9 37.715839849194865 39.0 38.0 39.0 35.0 39.0 10 37.26826155929324 39.0 37.0 39.0 34.0 39.0 11 36.98325180209481 39.0 37.0 39.0 33.0 39.0 12 36.299240664285996 38.0 35.0 39.0 32.0 39.0 13 35.97014761911083 38.0 35.0 39.0 32.0 39.0 14 37.0148614743326 39.0 35.0 41.0 32.0 41.0 15 37.17675463632864 39.0 35.0 41.0 32.0 41.0 16 37.31664266086102 39.0 35.0 41.0 33.0 41.0 17 37.25512916672198 39.0 35.0 41.0 32.0 41.0 18 37.13678662931939 39.0 35.0 41.0 32.0 41.0 19 37.029540416041634 38.0 35.0 41.0 32.0 41.0 20 36.86062472620107 38.0 35.0 41.0 32.0 41.0 21 36.69943680388695 38.0 35.0 41.0 32.0 41.0 22 36.59682028169762 38.0 35.0 41.0 31.0 41.0 23 36.50366890573351 38.0 35.0 40.0 31.0 41.0 24 36.53116827516627 38.0 35.0 40.0 31.0 41.0 25 36.52064941788687 38.0 35.0 40.0 31.0 41.0 26 36.286883205671124 38.0 35.0 40.0 31.0 41.0 27 36.26166217525787 38.0 35.0 40.0 31.0 41.0 28 36.25256707244222 38.0 35.0 40.0 31.0 41.0 29 36.20749810829827 38.0 35.0 40.0 31.0 41.0 30 36.11672629399036 38.0 35.0 40.0 30.0 41.0 31 35.94868676074287 38.0 35.0 40.0 30.0 41.0 32 35.735779049237344 38.0 35.0 40.0 30.0 41.0 33 35.50021240159832 38.0 35.0 40.0 29.0 41.0 34 35.26778365569701 37.0 34.0 40.0 27.0 41.0 35 35.019964090854785 37.0 34.0 40.0 25.0 41.0 36 34.82062187205459 37.0 34.0 40.0 24.0 41.0 37 34.72866193630607 37.0 34.0 40.0 24.0 41.0 38 34.678039002243494 37.0 34.0 40.0 24.0 41.0 39 34.57961741162102 37.0 34.0 40.0 23.0 41.0 40 34.446280648886884 37.0 34.0 40.0 23.0 41.0 41 34.42099158358667 37.0 34.0 40.0 23.0 41.0 42 34.37711903782076 36.0 34.0 40.0 23.0 41.0 43 34.29003936067119 36.0 33.0 40.0 23.0 41.0 44 34.168396301557166 36.0 33.0 40.0 23.0 41.0 45 34.05432170877086 36.0 33.0 40.0 23.0 41.0 46 34.01977823945625 36.0 33.0 40.0 23.0 41.0 47 33.97421311845372 35.0 33.0 40.0 23.0 41.0 48 33.8785942332966 35.0 33.0 40.0 23.0 41.0 49 33.828474093642555 36.0 33.0 40.0 22.0 41.0 50 33.66170565121003 35.0 33.0 40.0 22.0 41.0 >>END_MODULE >>Per sequence quality scores pass #Quality Count 12 2.0 13 1.0 14 9.0 15 14.0 16 43.0 17 117.0 18 274.0 19 535.0 20 933.0 21 1516.0 22 2271.0 23 3396.0 24 4920.0 25 7345.0 26 10501.0 27 13420.0 28 13957.0 29 14214.0 30 15402.0 31 17751.0 32 21788.0 33 28252.0 34 50492.0 35 84655.0 36 39726.0 37 49724.0 38 77778.0 39 143596.0 >>END_MODULE >>Per base sequence content fail #Base G A T C 1 33.212142733874074 22.1543163987309 27.659168447742573 16.974372419652457 2 32.02966321071566 24.320314885369513 30.375585763782876 13.274436140131954 3 27.436976463247888 24.24663808095156 34.941058556465634 13.375326899334915 4 25.36257616588565 26.836112254244714 33.45773208193392 14.343579497935721 5 22.515233177129655 32.17618712580812 32.07596012159992 13.232619575462307 6 20.97349626305938 40.01098514516322 29.022521206972087 9.99299738480532 7 85.38643815794714 4.247368211445791 8.961190245456597 1.4050033851504733 8 86.80023629677814 3.0091332687278474 8.684238473894517 1.5063919605995035 9 81.42216145176494 6.079166058224588 10.109652325133748 2.3890201648767406 10 42.91939359343679 33.373601136348555 14.389710470071288 9.31729480014337 11 40.92829454791647 20.277051334811294 25.234969268143743 13.55968484912849 12 37.72982516693438 20.127872399739807 27.812661790279975 14.329640643045838 13 21.602570059339694 36.02297919791847 27.57951784837181 14.79493289437003 14 16.67518485576604 37.636733528919805 29.808407120763587 15.879674494550573 15 15.864076252173797 23.113442366153805 46.16913804776381 14.853343333908587 16 17.871935111311714 19.983007872134237 44.16277263736409 17.982284379189952 17 17.760922088438715 19.935051573763094 31.003829866319744 31.300196471478447 18 21.724203162128795 22.160290193683707 35.99244646815967 20.123060176027824 19 27.047352281325914 23.039433684238475 29.762773964874086 20.150440069561522 20 30.08253793359795 22.385303136906103 28.14105457393567 19.391104355560277 21 22.67785315084496 26.13767606101236 30.66564669649139 20.51882409165129 22 22.754516852739318 23.093861593808494 29.381944536632638 24.769677016819553 23 20.01121745941138 28.07003278949674 29.21816299167651 22.700586759415366 24 20.35786350542288 23.66867341926748 38.946819949820124 17.026643125489517 25 17.474677746950046 24.837214087536008 36.280350197135235 21.407757968378714 26 18.90838853562373 31.89176811055503 29.32403191334015 19.87581144048109 27 18.957672343984388 30.170319531654478 31.514921212282122 19.357086912079012 28 16.814241527167493 26.711492253979213 38.462776619894065 18.011489598959233 29 17.247839477492068 23.386743485244725 38.04710005442791 21.318316982835295 30 19.24507825671388 28.179884241128917 32.97833503697115 19.59670246518605 31 27.12916008442964 25.18618327602915 28.039002243491883 19.64565439604933 32 27.230548659878668 26.112951187457682 28.956809462491208 17.699690690172442 33 25.58144937540655 26.396872386464707 28.393447410691763 19.628230827436976 34 19.948160734909532 26.56612991012757 30.66415324775319 22.821556107209705 35 21.26488470575741 24.928480399315006 31.746239827954703 22.06039506697288 36 27.609718700633223 25.286908096483423 28.258871085504918 18.844502117378433 37 20.9975573816193 30.720406483558786 29.654250023231427 18.62778611159049 38 20.348902812993668 31.93690345019846 25.902540854119927 21.811652882687945 39 21.06758353356609 30.60541093071725 28.248251005588816 20.07875453012784 40 23.289171501015545 26.910286874908735 27.09713390593264 22.70340771814308 41 18.362284113687956 25.36191241089089 28.819080301079264 27.456723174341885 42 21.827417063813407 26.557003278949676 26.03628748556333 25.57929217167359 43 23.016368198170692 26.615745595985608 26.79396381207769 23.573922393766015 44 20.559313146331426 29.9723546044684 28.70624195197069 20.762090297229488 45 18.83189077247806 34.04598494603672 25.02024452734007 22.101879754145152 46 21.34420342763079 30.898126883404796 27.816146504002443 19.94152318496197 47 21.91138207065008 27.49986724900105 28.316949647546096 22.27180103280277 48 22.94385296499356 24.541013421125992 30.65303535159102 21.86209826228942 49 20.73255319996283 24.59942386066455 32.270606273812206 22.397416665560407 50 19.313113143676404 31.141559027731684 28.758014841561685 20.787312987030226 >>END_MODULE >>Per sequence GC content fail #GC Content Count 0 192.0 1 521.0 2 850.0 3 5215.5 4 9581.0 5 7020.5 6 4460.0 7 4438.0 8 4416.0 9 4461.5 10 4507.0 11 4425.5 12 4344.0 13 4001.0 14 3658.0 15 3463.5 16 3269.0 17 2971.5 18 2674.0 19 2493.0 20 2312.0 21 2430.5 22 2549.0 23 2665.0 24 2781.0 25 3197.0 26 3613.0 27 5242.5 28 6872.0 29 7897.0 30 8922.0 31 10330.5 32 11739.0 33 13634.0 34 15529.0 35 16160.0 36 16791.0 37 19543.0 38 22295.0 39 24798.5 40 27302.0 41 35558.5 42 43815.0 43 50179.5 44 56544.0 45 57461.0 46 58378.0 47 54897.5 48 51417.0 49 48610.0 50 45803.0 51 42202.5 52 38602.0 53 36438.5 54 34275.0 55 30045.5 56 25816.0 57 23803.5 58 21791.0 59 20265.0 60 18739.0 61 17288.5 62 15838.0 63 13412.5 64 10987.0 65 9149.5 66 7312.0 67 6156.5 68 5001.0 69 4039.0 70 3077.0 71 2889.0 72 2701.0 73 2398.0 74 2095.0 75 1455.5 76 816.0 77 675.5 78 535.0 79 391.0 80 247.0 81 183.5 82 120.0 83 80.0 84 40.0 85 25.0 86 10.0 87 9.5 88 9.0 89 5.0 90 1.0 91 2.0 92 3.0 93 3.0 94 3.0 95 2.0 96 1.0 97 0.5 98 0.0 99 0.0 100 0.0 >>END_MODULE >>Per base N content pass #Base N-Count 1 0.0 2 0.0 3 0.0 4 0.0 5 0.0 6 0.0 7 0.0 8 0.0 9 0.0 10 0.0 11 0.0 12 0.0 13 0.0 14 0.0 15 0.0 16 0.0 17 0.0 18 0.0 19 0.0 20 0.0 21 0.0 22 0.0 23 0.0 24 0.0 25 0.0 26 0.0 27 0.0 28 0.0 29 0.0 30 0.0 31 0.0 32 0.0 33 0.0 34 0.0 35 0.0 36 0.0 37 0.0 38 0.0 39 0.0 40 0.0 41 0.0 42 0.0 43 0.0 44 0.0 45 0.0 46 0.0 47 0.0 48 0.0 49 0.0 50 0.0 >>END_MODULE >>Sequence Length Distribution pass #Length Count 50 602632.0 >>END_MODULE >>Sequence Duplication Levels fail #Total Deduplicated Percentage 22.054064343097394 #Duplication Level Percentage of deduplicated Percentage of total 1 77.08520158188972 17.000419955876286 2 5.511485595278906 2.4310131588867088 3 2.2412917906477965 1.4828878008780744 4 1.408708123289646 1.242709583666953 5 1.0728039439263644 1.1829843603440344 6 0.8199855947339482 1.0850409040005287 7 0.7123266433503211 1.09967883380254 8 0.6623966360696928 1.1686830426025818 9 0.5310926579729423 1.0541476485973695 >10 8.092161340361532 42.6737087617117 >50 1.76824951023538 25.607644444636872 >100 0.09203346426993017 2.675559628109734 >500 7.543726579502474E-4 0.09765909101482487 >1k 7.543726579502474E-4 0.3517058235184664 >5k 7.543726579502474E-4 0.8461569623533208 >10k+ 0.0 0.0 >>END_MODULE >>Overrepresented sequences warn #Sequence Count Percentage Possible Source CGTTTTTTTTTTTTTTTTTTTTTTTTTTTTTTTTTTTTTTTTTTTTTTTT 5086 0.8439644758326807 No Hit GACCAGAAAAATGGTCCTGCCAAGCGGCTACAGTGTTCTTCTTTCAGATA 2114 0.35079451472872336 No Hit >>END_MODULE >>Adapter Content pass #Position Illumina Universal Adapter Illumina Small RNA 3' Adapter Illumina Small RNA 5' Adapter Nextera Transposase Sequence SOLID Small RNA Adapter 1 0.0 0.0 0.0 0.03268993349174953 0.0 2 0.0 0.0 0.0 0.09906543296738309 0.0 3 0.0 0.0 0.0 0.1420435688778558 0.0 4 0.0 0.0 0.0 0.20742343586135487 0.0 5 0.0 0.0 0.0 0.3459822910167399 0.0 6 0.0 0.0 0.0 0.4739210662560236 0.0 7 0.0 0.0 0.0 0.5691699080035577 0.0 8 0.0 0.0 0.0 0.870514675622934 0.0 9 0.0 0.0 0.0 0.9921477784120325 0.0 10 0.0 0.0 0.0 1.1851345431374372 0.0 11 0.0 0.0 0.0 1.3298331319943182 0.0 12 0.0 0.0 0.0 1.48349241328041 0.0 13 0.0 0.0 0.0 1.5414050365729002 0.0 14 0.0 0.0 0.0 1.5621473801590358 0.0 15 0.0 0.0 0.0 1.5948373136507852 0.0 16 0.0 0.0 0.0 1.6736582192781 0.0 17 0.0 0.0 0.0 1.7737192847376178 0.0 18 0.0 0.0 0.0 1.9293698310079783 0.0 19 0.0 0.0 0.0 1.9906012292742503 0.0 20 0.0 0.0 0.0 2.059631748728909 0.0 21 0.0 0.0 0.0 2.1416054905813167 0.0 22 0.0 0.0 0.0 2.2181032537269845 0.0 23 0.0 0.0 0.0 2.318164319186502 0.0 24 0.0 0.0 0.0 2.4024612035205566 0.0 25 0.0 0.0 0.0 2.4645222955302737 0.0 26 0.0 0.0 0.0 2.5284087137755713 0.0 27 0.0 0.0 0.0 2.5976051719789193 0.0 28 0.0 0.0 0.0 2.6687928951665363 0.0 29 0.0 0.0 0.0 2.7431334545792456 0.0 30 0.0 0.0 0.0 2.838548235075469 0.0 31 0.0 0.0 0.0 2.9328014443308685 0.0 32 0.0 0.0 0.0 3.021080858633461 0.0 33 0.0 0.0 0.0 3.1063733754596505 0.0 34 1.659387486890839E-4 0.0 0.0 3.194320912264865 0.0 35 1.659387486890839E-4 0.0 0.0 3.3046701801431055 0.0 36 1.659387486890839E-4 0.0 0.0 3.406390633089514 0.0 37 1.659387486890839E-4 0.0 0.0 3.5079451472872334 0.0 38 1.659387486890839E-4 0.0 0.0 3.6043555602755912 0.0 >>END_MODULE >>Kmer Content warn #Sequence Count PValue Obs/Exp Max Max Obs/Exp Position AACGTTC 20 7.853496E-4 44.000004 40 CTCACGA 40 8.301868E-9 44.000004 24 AGTCCGA 20 7.853496E-4 44.000004 34 GCAAGCG 20 7.853496E-4 44.000004 1 GTACACG 20 7.853496E-4 44.000004 27 CGATTCA 20 7.853496E-4 44.000004 10 CCCGTCA 20 7.853496E-4 44.000004 22 TCTACGG 20 7.853496E-4 44.000004 2 CGGATCC 20 7.853496E-4 44.000004 24 CTACGCC 20 7.853496E-4 44.000004 16 GTCCGTT 20 7.853496E-4 44.000004 9 CATACCG 20 7.853496E-4 44.000004 41 TTTATCG 20 7.853496E-4 44.000004 1 CCGAACT 20 7.853496E-4 44.000004 34 TTGCACG 20 7.853496E-4 44.000004 26 GCTCGAT 20 7.853496E-4 44.000004 26 ATACCGG 20 7.853496E-4 44.000004 16 CTATGCG 35 1.4445504E-7 44.0 1 TCGTTGA 35 1.4445504E-7 44.0 24 CAACGTA 45 4.783942E-10 44.0 28 >>END_MODULE