##FastQC 0.11.5 >>Basic Statistics pass #Measure Value Filename SRR1545847_1.fastq.gz File type Conventional base calls Encoding Illumina 1.5 Total Sequences 5620197 Sequences flagged as poor quality 0 Sequence length 50 %GC 43 >>END_MODULE >>Per base sequence quality pass #Base Mean Median Lower Quartile Upper Quartile 10th Percentile 90th Percentile 1 31.497063359166948 31.0 31.0 33.0 30.0 34.0 2 31.884360103391394 31.0 31.0 34.0 30.0 34.0 3 31.860939749976737 31.0 31.0 34.0 30.0 34.0 4 35.66272036371679 37.0 35.0 37.0 33.0 37.0 5 35.61364343634218 37.0 35.0 37.0 33.0 37.0 6 35.661421298933114 37.0 35.0 37.0 33.0 37.0 7 35.994985585024864 37.0 35.0 37.0 35.0 37.0 8 35.97992917330122 37.0 35.0 37.0 35.0 37.0 9 37.73954204808123 39.0 38.0 39.0 35.0 39.0 10 37.233463702428935 39.0 37.0 39.0 34.0 39.0 11 36.99654585061698 39.0 37.0 39.0 33.0 39.0 12 36.47929814559881 39.0 35.0 39.0 32.0 39.0 13 36.230035530783 39.0 35.0 39.0 32.0 39.0 14 37.18879249250516 39.0 35.0 41.0 32.0 41.0 15 37.367774652739044 40.0 35.0 41.0 32.0 41.0 16 37.49899087167229 40.0 35.0 41.0 32.0 41.0 17 37.42516872629198 39.0 35.0 41.0 32.0 41.0 18 37.252951987270194 39.0 35.0 41.0 32.0 41.0 19 37.059921742956696 38.0 35.0 41.0 32.0 41.0 20 36.80621497787355 38.0 35.0 41.0 32.0 41.0 21 36.67673357357402 38.0 35.0 41.0 32.0 41.0 22 36.616416292880835 38.0 35.0 40.0 31.0 41.0 23 36.51736762964003 38.0 35.0 40.0 31.0 41.0 24 36.54334750187582 38.0 35.0 40.0 31.0 41.0 25 36.502227590954554 38.0 35.0 40.0 31.0 41.0 26 36.27509267023914 38.0 35.0 40.0 31.0 41.0 27 36.256651679647526 38.0 35.0 40.0 31.0 41.0 28 36.22227103427157 38.0 35.0 40.0 31.0 41.0 29 36.13539756702479 38.0 35.0 40.0 31.0 41.0 30 35.96359593800715 38.0 35.0 40.0 30.0 41.0 31 35.70855114153472 38.0 35.0 40.0 30.0 41.0 32 35.430586685840375 38.0 34.0 40.0 28.0 41.0 33 35.07389118210625 38.0 34.0 40.0 25.0 41.0 34 34.67844596906478 37.0 34.0 40.0 23.0 41.0 35 34.34561368578361 37.0 34.0 40.0 21.0 41.0 36 34.124800429593485 37.0 33.0 40.0 20.0 41.0 37 33.98368615904389 37.0 33.0 40.0 19.0 41.0 38 33.842733626597074 37.0 33.0 40.0 18.0 41.0 39 33.681714181905015 37.0 33.0 40.0 18.0 41.0 40 33.51968979023333 37.0 33.0 40.0 18.0 41.0 41 33.4415478674502 36.0 33.0 40.0 16.0 41.0 42 33.429808065446814 36.0 33.0 40.0 17.0 41.0 43 33.33625956527858 36.0 33.0 40.0 16.0 41.0 44 33.1934821857668 36.0 33.0 40.0 15.0 41.0 45 33.1072170601849 36.0 32.0 40.0 15.0 41.0 46 33.06999452154435 35.0 32.0 40.0 15.0 41.0 47 32.984860139244226 35.0 32.0 40.0 15.0 41.0 48 32.86917576020912 35.0 32.0 40.0 15.0 41.0 49 32.81441130978149 35.0 32.0 40.0 15.0 41.0 50 32.65268993239917 35.0 31.0 40.0 15.0 41.0 >>END_MODULE >>Per sequence quality scores pass #Quality Count 8 1.0 9 3.0 10 4.0 11 3.0 12 5.0 13 20.0 14 47.0 15 156.0 16 581.0 17 1396.0 18 3113.0 19 6334.0 20 11180.0 21 17912.0 22 27163.0 23 40291.0 24 59428.0 25 89833.0 26 128955.0 27 157366.0 28 158771.0 29 152046.0 30 159094.0 31 176100.0 32 207875.0 33 263047.0 34 430009.0 35 635973.0 36 388784.0 37 482215.0 38 734660.0 39 1287832.0 >>END_MODULE >>Per base sequence content fail #Base G A T C 1 31.452580754731553 21.167603199674318 27.680986983196497 19.698829062397635 2 36.890770910699395 23.135149888874 27.757941581051345 12.216137619375264 3 27.321782492677748 23.27578552851439 36.988116252864444 12.414315725943414 4 24.109243857466208 25.807796417100683 36.14311028599175 13.939849439441357 5 22.24375764764118 29.83043121086325 34.29886888306584 13.62694225842973 6 20.22717353146162 37.705546620518824 32.108251721425425 9.959028126594138 7 79.86123973946108 4.008453796192554 14.158880907555377 1.9714255567909809 8 80.40748393695097 3.370255526630116 13.971360790377988 2.250899746040931 9 75.34243016748346 5.891519460972631 15.677920186783489 3.0881301847604274 10 38.588184720215324 30.394948789161663 20.78338179248877 10.233484698134248 11 35.33931283903393 21.361849059739367 29.625634119231055 13.673203981995648 12 31.665313511252364 20.67856340267076 32.33680242881166 15.319320657265218 13 22.26601665386462 28.449732278067835 34.02215260425925 15.262098463808297 14 17.105699319792528 31.021563834862015 36.20899765613198 15.663739189213475 15 16.312292967666437 22.420014814427326 45.48673293836497 15.780959279541268 16 19.76802592506989 20.522554636430005 42.03567953222992 17.67373990627019 17 20.192423859875376 19.73238660495353 34.699317479440666 25.37587205573043 18 21.81272293480104 21.80263432046955 37.634570460786335 18.750072283943073 19 24.927506989523675 23.210076088080186 32.84986273612829 19.012554186267845 20 25.476526890427508 23.87763275913638 32.51136926339059 18.134471087045526 21 22.08860294398933 24.383184432858847 35.334704459647945 18.19350816350388 22 21.219202814420917 22.20352774110943 34.4963174778393 22.08095196663035 23 19.05463456174223 25.39781078848304 33.999075121388096 21.54847952838664 24 19.081466361410463 23.96261198673285 38.76892571559324 18.186995936263443 25 19.069900930518983 24.022503125780112 36.861537059999854 20.04605888370105 26 18.092408504541744 27.402260098711846 33.61597467135049 20.889356725395924 27 18.22042892802512 27.04451463178248 35.221505580676265 19.513550859516133 28 16.629167981122368 25.702355273311596 38.586423216125695 19.082053529440337 29 17.977127848009598 23.93494391744631 37.89966792978965 20.18826030475444 30 20.30346978940418 25.50570736221524 35.66979947500061 18.521023373379972 31 23.863433968595764 24.74818943179394 32.85244271686562 18.53593388274468 32 25.414981005114235 24.325410657313256 32.62419448997962 17.635413847592886 33 24.435638110194358 25.590277351487856 31.174298694511954 18.79978584380583 34 19.81386061734135 25.788829110438655 34.004466391480584 20.392843880739413 35 19.983160732622007 26.72831575120943 32.974502495197235 20.314021020971328 36 25.41515893482026 25.407223269931638 30.114371435734373 19.063246359513734 37 20.7609626495299 29.522844128061703 30.742801364436158 18.97339185797224 38 21.857098603483117 29.217036342320384 28.614744287433343 20.311120766763157 39 21.18363466618697 27.651913269232374 29.388275891396688 21.776176173183963 40 22.801958721375783 26.034781343073917 29.34655137533435 21.81670856021595 41 19.374623345053564 25.151467110494526 29.998076579877893 25.475832964574018 42 21.242867465321947 25.90807759941511 29.75141262841854 23.097642306844403 43 21.19105433492812 25.76925684277615 30.8142579343749 22.225430887920833 44 20.76051782526484 27.713957357722514 30.451815123206533 21.073709693806105 45 18.895102787322223 29.894592662855057 28.632377121300195 22.577927428522525 46 21.61004320667051 27.9483441594663 30.159779096711382 20.28183353715181 47 20.625077733040317 26.87135344188113 31.468843529862035 21.034725295216518 48 20.831921016291776 26.31971797429877 31.29409876557708 21.55426224383238 49 21.398876231562703 24.65845948104666 31.996796553572764 21.945867733817874 50 19.9831073537102 28.029800378883518 30.536474077332166 21.45061819007412 >>END_MODULE >>Per sequence GC content fail #GC Content Count 0 3874.0 1 7746.0 2 11618.0 3 92105.5 4 172593.0 5 117895.0 6 63197.0 7 62285.5 8 61374.0 9 62009.5 10 62645.0 11 61008.5 12 59372.0 13 56614.0 14 53856.0 15 50508.0 16 47160.0 17 44204.5 18 41249.0 19 39711.5 20 38174.0 21 37441.0 22 36708.0 23 39210.5 24 41713.0 25 44838.5 26 47964.0 27 53469.5 28 58975.0 29 68738.0 30 78501.0 31 93104.0 32 107707.0 33 118416.5 34 129126.0 35 145680.5 36 162235.0 37 181448.5 38 200662.0 39 226476.0 40 252290.0 41 296362.5 42 340435.0 43 396795.0 44 453155.0 45 467086.5 46 481018.0 47 461355.5 48 441693.0 49 416528.5 50 391364.0 51 360566.5 52 329769.0 53 304928.5 54 280088.0 55 266886.0 56 253684.0 57 239549.5 58 225415.0 59 207580.5 60 189746.0 61 171620.0 62 153494.0 63 132596.0 64 111698.0 65 96744.0 66 81790.0 67 67817.0 68 53844.0 69 46840.0 70 39836.0 71 32630.5 72 25425.0 73 21146.5 74 16868.0 75 12488.5 76 8109.0 77 6843.0 78 5577.0 79 4135.5 80 2694.0 81 2419.0 82 2144.0 83 1385.5 84 627.0 85 502.5 86 378.0 87 278.5 88 179.0 89 135.5 90 92.0 91 69.5 92 47.0 93 39.5 94 32.0 95 16.5 96 1.0 97 1.5 98 2.0 99 1.0 100 0.0 >>END_MODULE >>Per base N content pass #Base N-Count 1 0.0 2 0.0 3 0.0 4 0.0 5 0.0 6 0.0 7 0.0 8 0.0 9 0.0 10 0.0 11 0.0 12 0.0 13 0.0 14 0.0 15 0.0 16 0.0 17 0.0 18 0.0 19 0.0 20 0.0 21 0.0 22 0.0 23 0.0 24 0.0 25 0.0 26 0.0 27 0.0 28 0.0 29 0.0 30 0.0 31 0.0 32 0.0 33 0.0 34 0.0 35 0.0 36 0.0 37 0.0 38 0.0 39 0.0 40 0.0 41 0.0 42 0.0 43 0.0 44 0.0 45 0.0 46 0.0 47 0.0 48 0.0 49 0.0 50 0.0 >>END_MODULE >>Sequence Length Distribution pass #Length Count 50 5620197.0 >>END_MODULE >>Sequence Duplication Levels fail #Total Deduplicated Percentage 18.961459661352762 #Duplication Level Percentage of deduplicated Percentage of total 1 79.73616187589761 15.119140169609265 2 8.669021836695991 3.287546157197946 3 3.0214261505364157 1.718719502194578 4 1.5028322003359043 1.1398356857780505 5 0.9098373167481522 0.8625921789956761 6 0.6255347570908686 0.7116631238011564 7 0.42283877032794115 0.5612348200780484 8 0.3216400901708194 0.4879012476198286 9 0.26473808004501403 0.45178383830377616 >10 2.4758327119174837 10.395776897106058 >50 0.7602834059964576 10.520601067741246 >100 1.271983402631685 49.906435129525995 >500 0.014620419495553488 1.7712652081064928 >1k 0.0030578655153991603 0.9320722366908383 >5k 0.0 0.0 >10k+ 1.9111659471244752E-4 2.1334327372509487 >>END_MODULE >>Overrepresented sequences fail #Sequence Count Percentage Possible Source CGTTTTTTTTTTTTTTTTTTTTTTTTTTTTTTTTTTTTTTTTTTTTTTTT 107167 1.9068192805341166 No Hit GACCAGAAAAATGGTCCTGCCAAGCGGCTACAGTGTTCTTCTTTCAGATA 10577 0.18819625006027368 No Hit >>END_MODULE >>Adapter Content warn #Position Illumina Universal Adapter Illumina Small RNA 3' Adapter Illumina Small RNA 5' Adapter Nextera Transposase Sequence SOLID Small RNA Adapter 1 0.0 0.0 0.0 0.1000320807259959 0.0 2 0.0 0.0 0.0 0.2537455537590586 0.0 3 0.0 0.0 0.0 0.35770988098815754 0.0 4 1.779297060227604E-5 0.0 0.0 0.5068683535470376 0.0 5 1.779297060227604E-5 0.0 0.0 0.8155763934965269 0.0 6 1.779297060227604E-5 0.0 0.0 1.1317574810989721 0.0 7 1.779297060227604E-5 0.0 0.0 1.3652368413420384 0.0 8 1.779297060227604E-5 0.0 0.0 1.9221390282226762 0.0 9 1.779297060227604E-5 0.0 0.0 2.1973962834398866 0.0 10 1.779297060227604E-5 0.0 0.0 2.6527184011521303 0.0 11 1.779297060227604E-5 0.0 0.0 3.0567433846180125 0.0 12 1.779297060227604E-5 0.0 0.0 3.432637681561696 0.0 13 1.779297060227604E-5 0.0 0.0 3.582490079974065 0.0 14 1.779297060227604E-5 0.0 0.0 3.6435555550810763 0.0 15 1.779297060227604E-5 0.0 0.0 3.735563006065446 0.0 16 1.779297060227604E-5 0.0 0.0 3.9210013456823667 0.0 17 1.779297060227604E-5 0.0 0.0 4.141064806091316 0.0 18 1.779297060227604E-5 0.0 0.0 4.480038689035277 0.0 19 1.779297060227604E-5 0.0 0.0 4.628965852976328 0.0 20 1.779297060227604E-5 0.0 0.0 4.796130811784711 0.0 21 1.779297060227604E-5 0.0 0.0 4.980216885635859 0.0 22 1.779297060227604E-5 0.0 0.0 5.177309620997271 0.0 23 1.779297060227604E-5 0.0 0.0 5.379829212392377 0.0 24 1.779297060227604E-5 0.0 0.0 5.540054912665873 0.0 25 1.779297060227604E-5 0.0 0.0 5.672576957711625 0.0 26 1.779297060227604E-5 0.0 0.0 5.812109433174673 0.0 27 1.779297060227604E-5 0.0 0.0 5.972086031859737 0.0 28 1.779297060227604E-5 0.0 0.0 6.124429446156425 0.0 29 1.779297060227604E-5 0.0 0.0 6.309725442008528 0.0 30 1.779297060227604E-5 0.0 0.0 6.515714662671077 0.0 31 1.779297060227604E-5 0.0 0.0 6.700156595934271 0.0 32 1.779297060227604E-5 0.0 0.0 6.872641652952734 0.0 33 1.779297060227604E-5 0.0 0.0 7.044539541941323 0.0 34 1.779297060227604E-5 0.0 0.0 7.233999092914359 0.0 35 1.779297060227604E-5 0.0 0.0 7.448173080053955 0.0 36 1.779297060227604E-5 0.0 0.0 7.6349103065248425 0.0 37 1.779297060227604E-5 0.0 0.0 7.835081225800448 0.0 38 1.779297060227604E-5 0.0 0.0 8.06727949216015 0.0 >>END_MODULE >>Kmer Content fail #Sequence Count PValue Obs/Exp Max Max Obs/Exp Position CAATCGA 30 2.529483E-6 44.0 21 CGTTTTT 57575 0.0 42.914806 1 CGGTCTA 580 0.0 42.862072 31 CGACGGT 590 0.0 42.135593 28 CGTACTA 60 3.6379788E-12 40.333332 21 TACGCGG 390 0.0 40.05128 2 TACGGGA 1725 0.0 38.133335 4 TCGATAG 435 0.0 37.931038 1 GTTTTTT 67410 0.0 37.906837 2 TTCGATC 35 7.295266E-6 37.714287 23 AGGGCGA 4380 0.0 37.42009 6 ACGGGAC 1385 0.0 36.851986 5 TGCGTAG 335 0.0 36.776115 1 CGACAAT 865 0.0 36.369946 20 CGACAGG 835 0.0 36.35928 2 GCGATAT 565 0.0 36.21239 9 ACGGTCT 670 0.0 36.1194 30 CGAATAT 495 0.0 36.0 14 GGGCGAT 8945 0.0 35.760757 7 AACGGGA 2005 0.0 35.660847 4 >>END_MODULE