##FastQC 0.11.5 >>Basic Statistics pass #Measure Value Filename SRR1545845_1.fastq.gz File type Conventional base calls Encoding Illumina 1.5 Total Sequences 1946288 Sequences flagged as poor quality 0 Sequence length 50 %GC 45 >>END_MODULE >>Per base sequence quality pass #Base Mean Median Lower Quartile Upper Quartile 10th Percentile 90th Percentile 1 31.499499046389847 31.0 31.0 33.0 30.0 34.0 2 31.905054647616385 31.0 31.0 34.0 30.0 34.0 3 31.948249179977473 33.0 31.0 34.0 30.0 34.0 4 35.71028491158554 37.0 35.0 37.0 33.0 37.0 5 35.6561290004357 37.0 35.0 37.0 33.0 37.0 6 35.69705819488174 37.0 35.0 37.0 33.0 37.0 7 35.98110454362355 37.0 35.0 37.0 35.0 37.0 8 35.96854576506663 37.0 35.0 37.0 35.0 37.0 9 37.74948466002976 39.0 38.0 39.0 35.0 39.0 10 37.264547179040306 39.0 37.0 39.0 34.0 39.0 11 37.022282416579664 39.0 37.0 39.0 33.0 39.0 12 36.411054273571025 38.0 35.0 39.0 32.0 39.0 13 36.14514963869684 38.0 35.0 39.0 32.0 39.0 14 37.18151321900972 39.0 35.0 41.0 32.0 41.0 15 37.3368766595694 39.0 35.0 41.0 32.0 41.0 16 37.45204769283888 39.0 35.0 41.0 33.0 41.0 17 37.37674177716762 39.0 35.0 41.0 32.0 41.0 18 37.24908184194734 39.0 35.0 41.0 32.0 41.0 19 37.09352829591509 38.0 35.0 41.0 32.0 41.0 20 36.874865898572054 38.0 35.0 41.0 32.0 41.0 21 36.72378702432528 38.0 35.0 41.0 32.0 41.0 22 36.63645719441316 38.0 35.0 41.0 31.0 41.0 23 36.54274290341409 38.0 35.0 40.0 31.0 41.0 24 36.58447876162212 38.0 35.0 41.0 31.0 41.0 25 36.549885217398455 38.0 35.0 41.0 31.0 41.0 26 36.31675887638417 38.0 35.0 40.0 31.0 41.0 27 36.286150867703036 38.0 35.0 40.0 31.0 41.0 28 36.267394136941704 38.0 35.0 40.0 31.0 41.0 29 36.21092818740084 38.0 35.0 40.0 31.0 41.0 30 36.074716588706295 38.0 35.0 40.0 30.0 41.0 31 35.858335970832684 38.0 35.0 40.0 30.0 41.0 32 35.61074568614717 38.0 35.0 40.0 29.0 41.0 33 35.29237450983616 38.0 34.0 40.0 27.0 41.0 34 34.982949080506074 38.0 34.0 40.0 25.0 41.0 35 34.68024773312069 37.0 34.0 40.0 23.0 41.0 36 34.501509540211934 37.0 34.0 40.0 23.0 41.0 37 34.417363206267524 37.0 34.0 40.0 23.0 41.0 38 34.31704763118305 37.0 33.0 40.0 22.0 41.0 39 34.208600166059696 37.0 33.0 40.0 22.0 41.0 40 34.0566709551721 37.0 33.0 40.0 21.0 41.0 41 33.98985710234046 37.0 33.0 40.0 20.0 41.0 42 33.94853485198491 36.0 33.0 40.0 20.0 41.0 43 33.84478864381839 36.0 33.0 40.0 20.0 41.0 44 33.72736768659109 36.0 33.0 40.0 19.0 41.0 45 33.63287447695305 36.0 33.0 40.0 20.0 41.0 46 33.5806745969764 36.0 33.0 40.0 20.0 41.0 47 33.52944682390273 35.0 33.0 40.0 20.0 41.0 48 33.431062617659876 35.0 33.0 40.0 19.0 41.0 49 33.3784337158735 36.0 33.0 40.0 18.0 41.0 50 33.212108382726505 35.0 33.0 40.0 18.0 41.0 >>END_MODULE >>Per sequence quality scores pass #Quality Count 8 1.0 9 0.0 10 1.0 11 0.0 12 3.0 13 12.0 14 16.0 15 77.0 16 165.0 17 492.0 18 1069.0 19 1968.0 20 3471.0 21 5679.0 22 8588.0 23 12423.0 24 18023.0 25 26628.0 26 39135.0 27 48629.0 28 50289.0 29 48854.0 30 51883.0 31 58152.0 32 69018.0 33 88586.0 34 151678.0 35 246807.0 36 129361.0 37 165106.0 38 259245.0 39 460929.0 >>END_MODULE >>Per base sequence content fail #Base G A T C 1 32.102237695551736 22.107211265753065 27.87372680713235 17.916824231562853 2 35.061820244485915 23.4691371472259 28.810124709190006 12.658917899098181 3 28.03089779107717 23.3648360365989 35.54941509170277 13.054851080621162 4 23.740011755711386 26.711874090576522 35.270576605312264 14.277537548399827 5 22.225847356609094 30.456592241230485 33.333864258527 13.98369614363342 6 20.08084106771454 38.634518632391504 30.842660490122736 10.441979809771215 7 83.14386154567053 3.7830475243129484 11.419532977647705 1.653557952368817 8 84.17546632358624 2.963487418100507 11.050625601144331 1.8104206571689287 9 79.36867513954769 5.32552222487114 12.623465797456493 2.682336838124676 10 41.143653971046426 30.94983887276703 17.31634783752456 10.590159318661986 11 39.04309125884761 20.092041876639016 27.07065963516191 13.794207229351462 12 34.214771914536804 20.617555058655245 29.852365117598218 15.315307909209736 13 21.790608584135544 31.403060595348688 31.400183323331387 15.406147497184383 14 16.926066440321268 32.88706501812682 34.21240844109402 15.974460100457897 15 16.18599097358664 22.03486842646104 46.23123607605863 15.547904523893688 16 19.77317848129362 18.95603322838141 43.153274335555686 18.117513954769286 17 19.29549994656495 19.817416538559556 32.749161480726386 28.13792203414911 18 22.30774684938714 20.940169183594616 36.42133127265852 20.330752694359724 19 26.88153037988211 23.243117154295767 30.599942043520794 19.275410422301327 20 28.111101748559307 22.797705170046775 30.073555403927887 19.01763767746603 21 22.934632490155618 25.34609471979481 32.563937094612925 19.155335695436644 22 23.002608041564248 21.874460511496757 31.29685842999597 23.826073016943024 23 19.992416333040126 26.286140591731545 31.222460396405875 22.498982678822454 24 20.3523836143469 22.596964066982892 38.674594921203855 18.376057397466354 25 19.23533413348898 23.699729947469233 36.45847890959612 20.606457009445673 26 18.83554746265712 29.201125424397624 31.462044671703264 20.501282441241994 27 18.21462188535304 28.425135437304245 33.220109254128886 20.14013342321383 28 17.088169890581455 25.225608954070516 39.145645454321254 18.540575701026775 29 18.70797127660449 22.715651537696374 37.61354948496831 20.962827700730827 30 20.138694787205182 25.680372072375725 34.45091373938492 19.730019401034173 31 26.432573185468954 23.717815657292242 30.24413653066761 19.605474626571194 32 27.727396973109837 23.934484516166158 30.173283707241684 18.16483480348232 33 25.860715372031272 25.02651200644509 29.278863148722078 19.833909472801558 34 20.887658969278956 25.714488297723666 31.220096922963098 22.17775581003428 35 20.926091102652844 25.963372327219815 32.638592027490276 20.47194454263706 36 26.80867374201557 25.304220135971654 28.838383630788456 19.04872249122432 37 21.734810058942973 30.15915424644246 29.29828473483883 18.80775095977574 38 21.96499182032669 30.171896451090486 27.02775745418972 20.8353542743931 39 21.96971876721225 29.415173910541505 28.132475769259223 20.48263155298702 40 24.60920480422219 25.552641746750737 27.62910730580469 22.20904614322238 41 19.88056238336772 24.83666343316097 28.673043249508805 26.609730933962496 42 22.486754272748946 25.309101222429568 26.79382496321202 25.410319541609468 43 22.532379586166076 25.15860961995347 28.0407627237079 24.268248070172554 44 20.95095895365948 28.005516141496017 29.670788701363826 21.372736203480677 45 19.064701626891807 31.69782683754922 27.169514480899025 22.06795705465995 46 21.757571335794086 29.68882303132938 28.167414072326398 20.386191560550134 47 21.336564783834664 26.627302845210988 29.135667486004124 22.90046488495022 48 22.363596754437165 24.9657296350797 31.269781245118917 21.40089236536422 49 21.91895546804995 24.422952820959694 31.92759756007333 21.73049415091703 50 20.152413209144793 30.267462985950694 28.60486217867037 20.975261626234143 >>END_MODULE >>Per sequence GC content fail #GC Content Count 0 872.0 1 2090.0 2 3308.0 3 22642.5 4 41977.0 5 29934.0 6 17891.0 7 17819.0 8 17747.0 9 17899.5 10 18052.0 11 17446.5 12 16841.0 13 15886.0 14 14931.0 15 13893.5 16 12856.0 17 12188.0 18 11520.0 19 10426.0 20 9332.0 21 9358.0 22 9384.0 23 10181.0 24 10978.0 25 12425.5 26 13873.0 27 16102.5 28 18332.0 29 21999.5 30 25667.0 31 28979.0 32 32291.0 33 37837.5 34 43384.0 35 48418.0 36 53452.0 37 58623.5 38 63795.0 39 74770.0 40 85745.0 41 109779.5 42 133814.0 43 150998.0 44 168182.0 45 167360.0 46 166538.0 47 159917.0 48 153296.0 49 143354.5 50 133413.0 51 127377.0 52 121341.0 53 115125.0 54 108909.0 55 99858.5 56 90808.0 57 86391.5 58 81975.0 59 76132.0 60 70289.0 61 65887.5 62 61486.0 63 53488.0 64 45490.0 65 38026.0 66 30562.0 67 25487.5 68 20413.0 69 17243.0 70 14073.0 71 12115.0 72 10157.0 73 7949.0 74 5741.0 75 4480.5 76 3220.0 77 2526.0 78 1832.0 79 1501.5 80 1171.0 81 920.5 82 670.0 83 487.0 84 304.0 85 248.0 86 192.0 87 150.5 88 109.0 89 73.0 90 37.0 91 27.5 92 18.0 93 18.5 94 19.0 95 10.0 96 1.0 97 0.5 98 0.0 99 0.0 100 0.0 >>END_MODULE >>Per base N content pass #Base N-Count 1 0.0 2 0.0 3 0.0 4 0.0 5 0.0 6 0.0 7 0.0 8 0.0 9 0.0 10 0.0 11 0.0 12 0.0 13 0.0 14 0.0 15 0.0 16 0.0 17 0.0 18 0.0 19 0.0 20 0.0 21 0.0 22 0.0 23 0.0 24 0.0 25 0.0 26 0.0 27 0.0 28 0.0 29 0.0 30 0.0 31 0.0 32 0.0 33 0.0 34 0.0 35 0.0 36 0.0 37 0.0 38 0.0 39 0.0 40 0.0 41 0.0 42 0.0 43 0.0 44 0.0 45 0.0 46 0.0 47 0.0 48 0.0 49 0.0 50 0.0 >>END_MODULE >>Sequence Length Distribution pass #Length Count 50 1946288.0 >>END_MODULE >>Sequence Duplication Levels fail #Total Deduplicated Percentage 19.204770302041183 #Duplication Level Percentage of deduplicated Percentage of total 1 80.43433741435649 15.447229744395937 2 6.579417512468051 2.527124040963522 3 2.2539412900957427 1.2985927425172534 4 1.2633709782655187 0.9705099777541741 5 0.7442347685432785 0.7146428890333224 6 0.5560564294473251 0.640736160150543 7 0.47544402477472564 0.6391555301093609 8 0.37444116988918386 0.5752845327479484 9 0.31223822752061114 0.5396817095144829 >10 4.224265551326069 19.979121444594377 >50 1.611294943934572 22.244419454166632 >100 1.1687912551709383 32.870770655996054 >500 0.001624825655665449 0.21026567223680687 >1k 2.708042759442415E-4 0.16257494222415492 >5k 0.0 0.0 >10k+ 2.708042759442415E-4 1.179890503595458 >>END_MODULE >>Overrepresented sequences fail #Sequence Count Percentage Possible Source CGTTTTTTTTTTTTTTTTTTTTTTTTTTTTTTTTTTTTTTTTTTTTTTTT 22687 1.1656548260072508 No Hit GACCAGAAAAATGGTCCTGCCAAGCGGCTACAGTGTTCTTCTTTCAGATA 3126 0.16061343439408762 No Hit >>END_MODULE >>Adapter Content pass #Position Illumina Universal Adapter Illumina Small RNA 3' Adapter Illumina Small RNA 5' Adapter Nextera Transposase Sequence SOLID Small RNA Adapter 1 0.0 0.0 0.0 0.023943013572503145 0.0 2 0.0 0.0 0.0 0.08010119776723691 0.0 3 0.0 0.0 0.0 0.11827643185386746 0.0 4 0.0 0.0 0.0 0.1905165114309907 0.0 5 0.0 0.0 0.0 0.3382849814621474 0.0 6 0.0 0.0 0.0 0.5049098591780867 0.0 7 0.0 0.0 0.0 0.6269370206259299 0.0 8 0.0 0.0 0.0 0.9630126682176533 0.0 9 0.0 0.0 0.0 1.136625206547027 0.0 10 0.0 0.0 0.0 1.410890885624327 0.0 11 0.0 0.0 0.0 1.6027432733490625 0.0 12 0.0 0.0 0.0 1.786940062313491 0.0 13 0.0 0.0 0.0 1.8557890712988006 0.0 14 0.0 0.0 0.0 1.8799889841585624 0.0 15 0.0 0.0 0.0 1.9169824815238032 0.0 16 0.0 0.0 0.0 1.9966212605739746 0.0 17 0.0 0.0 0.0 2.0964523236026733 0.0 18 0.0 0.0 0.0 2.2471494455085783 0.0 19 0.0 0.0 0.0 2.3153305163470153 0.0 20 0.0 0.0 0.0 2.39476377596738 0.0 21 0.0 0.0 0.0 2.4886347755316787 0.0 22 0.0 0.0 0.0 2.5856399464005326 0.0 23 0.0 0.0 0.0 2.6930238484746347 0.0 24 0.0 0.0 0.0 2.7726626275248063 0.0 25 0.0 0.0 0.0 2.8368874493394607 0.0 26 0.0 0.0 0.0 2.9064043964716424 0.0 27 0.0 0.0 0.0 2.9764865220357932 0.0 28 0.0 0.0 0.0 3.0496000591895958 0.0 29 0.0 0.0 0.0 3.1379734140065603 0.0 30 0.0 0.0 0.0 3.2390375936141003 0.0 31 0.0 0.0 0.0 3.3330627327507543 0.0 32 0.0 0.0 0.0 3.4162467219650945 0.0 33 0.0 0.0 0.0 3.50554491421619 0.0 34 0.0 0.0 0.0 3.6036290620915303 0.0 35 0.0 0.0 0.0 3.718514423353584 0.0 36 0.0 0.0 0.0 3.82065757996761 0.0 37 3.0827914471034094E-4 0.0 0.0 3.9353888016573086 0.0 38 3.0827914471034094E-4 0.0 0.0 4.047448270759517 0.0 >>END_MODULE >>Kmer Content warn #Sequence Count PValue Obs/Exp Max Max Obs/Exp Position TGCGATA 20 7.85783E-4 44.0 26 TATCGAC 20 7.85783E-4 44.0 12 ATCGACG 35 1.4467696E-7 43.999996 1 CGTTTTT 15720 0.0 43.1743 1 TCACGAC 215 0.0 41.953487 25 ACGTAAG 100 0.0 41.800003 1 ATTAGCG 85 0.0 41.411766 1 TAACGCG 70 0.0 40.85714 1 TTGCGAG 250 0.0 40.48 1 ACTACGG 45 2.3523171E-8 39.11111 2 ATAGCGG 285 0.0 37.824562 2 GGTACGA 35 7.2928124E-6 37.714283 7 CTATACG 35 7.2928124E-6 37.714283 1 CCCGTAT 35 7.2928124E-6 37.714283 34 ACCCGTA 35 7.2928124E-6 37.714283 33 TAGGACG 70 0.0 37.714283 1 TACGGGA 640 0.0 37.46875 4 TGTTACG 100 0.0 37.4 1 TCGATTG 65 1.0913936E-11 37.230766 1 CATACGA 95 0.0 37.05263 18 >>END_MODULE