##FastQC 0.11.5 >>Basic Statistics pass #Measure Value Filename SRR1545841_1.fastq.gz File type Conventional base calls Encoding Illumina 1.5 Total Sequences 2978236 Sequences flagged as poor quality 0 Sequence length 50 %GC 45 >>END_MODULE >>Per base sequence quality pass #Base Mean Median Lower Quartile Upper Quartile 10th Percentile 90th Percentile 1 31.676291939255318 31.0 31.0 33.0 30.0 34.0 2 32.09942227546776 33.0 31.0 34.0 30.0 34.0 3 32.13733364313641 33.0 31.0 34.0 30.0 34.0 4 35.83168996681257 37.0 35.0 37.0 35.0 37.0 5 35.807656948609846 37.0 35.0 37.0 35.0 37.0 6 35.8588701499814 37.0 35.0 37.0 35.0 37.0 7 36.084936183700684 37.0 35.0 37.0 35.0 37.0 8 36.03738118805897 37.0 35.0 37.0 35.0 37.0 9 37.80188138213359 39.0 38.0 39.0 35.0 39.0 10 37.52245591014278 39.0 37.0 39.0 35.0 39.0 11 37.296869690649096 39.0 37.0 39.0 34.0 39.0 12 36.59681166972664 39.0 35.0 39.0 33.0 39.0 13 36.326049379565625 39.0 35.0 39.0 33.0 39.0 14 37.269706631710854 39.0 35.0 41.0 33.0 41.0 15 37.471205102617795 40.0 35.0 41.0 33.0 41.0 16 37.55612785554939 40.0 35.0 41.0 33.0 41.0 17 37.48925370588496 39.0 35.0 41.0 33.0 41.0 18 37.397990958406254 39.0 35.0 41.0 33.0 41.0 19 37.33637764099286 39.0 35.0 41.0 33.0 41.0 20 37.16595830552045 39.0 35.0 41.0 33.0 41.0 21 37.065044543145675 39.0 35.0 41.0 32.0 41.0 22 37.0947201632107 39.0 35.0 41.0 33.0 41.0 23 37.09673545011208 39.0 35.0 41.0 33.0 41.0 24 37.062451733173596 39.0 35.0 41.0 33.0 41.0 25 36.973307353749 38.0 35.0 41.0 32.0 41.0 26 36.84379108975917 38.0 35.0 41.0 32.0 41.0 27 36.75089415345191 38.0 35.0 41.0 32.0 41.0 28 36.72838418446356 38.0 35.0 41.0 32.0 41.0 29 36.64973427223363 38.0 35.0 41.0 32.0 41.0 30 36.546258254886446 38.0 35.0 41.0 31.0 41.0 31 36.356033571550405 38.0 35.0 41.0 31.0 41.0 32 36.19902586631818 38.0 35.0 41.0 30.0 41.0 33 36.00819814145017 38.0 35.0 41.0 30.0 41.0 34 35.79292742415309 38.0 35.0 41.0 29.0 41.0 35 35.59071880133072 38.0 35.0 41.0 29.0 41.0 36 35.440837462175594 38.0 35.0 40.0 27.0 41.0 37 35.35425332310804 38.0 35.0 40.0 27.0 41.0 38 35.23397440632643 38.0 34.0 40.0 27.0 41.0 39 35.168099170112775 38.0 34.0 40.0 26.0 41.0 40 34.991476498168716 38.0 34.0 40.0 24.0 41.0 41 34.87029167601224 37.0 34.0 40.0 24.0 41.0 42 34.867646486040734 37.0 34.0 40.0 24.0 41.0 43 34.79784476448475 37.0 34.0 40.0 24.0 41.0 44 34.66703075243198 37.0 34.0 40.0 24.0 41.0 45 34.568352541571585 37.0 34.0 40.0 23.0 41.0 46 34.548068051020806 36.0 34.0 40.0 23.0 41.0 47 34.46273868155512 36.0 34.0 40.0 23.0 41.0 48 34.40409692180204 36.0 34.0 40.0 23.0 41.0 49 34.346748209342714 36.0 34.0 40.0 24.0 41.0 50 34.18553801646344 36.0 34.0 40.0 24.0 41.0 >>END_MODULE >>Per sequence quality scores pass #Quality Count 10 3.0 11 8.0 12 16.0 13 17.0 14 42.0 15 79.0 16 222.0 17 554.0 18 1203.0 19 2446.0 20 4276.0 21 6968.0 22 10203.0 23 14986.0 24 21559.0 25 31214.0 26 44204.0 27 54913.0 28 57415.0 29 59596.0 30 65495.0 31 75893.0 32 93679.0 33 122729.0 34 227294.0 35 436649.0 36 175993.0 37 230063.0 38 389091.0 39 851426.0 >>END_MODULE >>Per base sequence content fail #Base G A T C 1 32.1518509614416 23.19614698096457 29.828764409536383 14.823237648057441 2 32.38876972812094 25.041836845703298 29.357042222308777 13.212351203866987 3 29.74975791038722 24.473648159514557 32.37191411291785 13.404679817180371 4 26.418356369340778 26.61659452105206 31.887969925821864 15.077079183785303 5 23.324343671891683 31.16982670278648 31.568821275412695 13.937008349909142 6 21.041750888781145 39.76286634101528 28.590313192104322 10.60506957809925 7 85.39558315727834 4.293816876835818 8.483478139408698 1.8271218264771496 8 86.19565407173911 3.760984690266319 8.152711873740026 1.8906493642545454 9 81.78686981152602 5.221345789923968 9.92607704694994 3.0657073516000746 10 45.67082662354495 27.834630969473206 16.14086324925224 10.353679157729609 11 41.97864104792232 21.022007658224535 23.802008974439904 13.197342319413236 12 37.75164224729001 21.558902652442587 26.457305599690557 14.232149500576853 13 23.499514477697538 33.54012240802945 27.535124818852502 15.42523829542051 14 17.16193746902529 35.265539735601884 31.66508631283753 15.907436482535301 15 16.344272247061685 23.346538017806516 45.250779320376225 15.05841041475558 16 19.884858016624605 20.041393630323455 41.69041674333398 18.383331609717967 17 19.839965670954214 19.932134323807784 30.423008787752217 29.804891217485785 18 22.586289333686118 22.872935522906847 35.168032352036576 19.372742791370463 19 27.89637893034669 24.13361466317646 27.77039831631879 20.199608090158065 20 28.596625653574804 23.9706994341617 28.610325038042657 18.822349874220848 21 23.218442057647547 26.065227873143698 30.873040282905723 19.843289786303036 22 22.2269491067867 23.299798941386783 30.190488597948583 24.282763353877932 23 19.580382481442037 28.163483350547104 29.286094184611294 22.97003998339957 24 20.24698512810939 23.55666240015902 37.13382686932802 19.06252560240357 25 20.01741970750471 24.229443200605996 34.96395181577282 20.789185276116466 26 18.179083188840643 30.659826823663405 29.548027758713545 21.613062228782407 27 18.13032949705799 29.61884148872017 31.941457963707375 20.309371050514464 28 16.392723746539897 26.42960463845041 37.44528640443538 19.732385210574314 29 17.874238307508204 24.771072540926912 36.41833622318715 20.936352928377737 30 20.515634086754712 27.39060974348574 33.17819675808096 18.91555941167859 31 26.89548444112555 25.35131534237045 28.172381235066663 19.580818981437336 32 29.095511571279104 25.569195993870196 28.50281173150818 16.832480703342515 33 26.868186402957996 26.108575680369185 27.29917978293191 19.72405813374091 34 19.909570631743083 26.907102056385057 31.110496280348503 22.072831031523357 35 20.577314893782763 26.63482679008648 31.351813623903546 21.43604469222721 36 27.289140283040027 26.240096486645115 27.983981121710972 18.486782108603887 37 20.60300123965999 31.106198434240937 29.784006371556853 18.506793954542218 38 21.299823116771137 31.351007777758376 26.029569181220026 21.31959992425046 39 21.101148465064554 29.71450214153613 27.76821581634229 21.41613357705702 40 23.662496860557727 26.552831944815658 27.234779245163914 22.5498919494627 41 18.837459489442743 25.25313642035084 28.419037309333444 27.49036678087297 42 21.88392726432694 25.611066416496207 26.884907710470223 25.62009860870663 43 21.729607727527302 26.110959641881976 28.060335043965623 24.099097586625103 44 20.14652297534514 28.221369965308323 29.949204831316255 21.682902228030283 45 18.876576604406097 33.00030622153516 25.93521802838996 22.18789914566878 46 21.942250379083458 30.169301559715212 27.517866280576825 20.3705817806245 47 20.769744237864295 27.725841739875552 29.19100433948149 22.313409682778666 48 21.454109076648056 26.04706275795471 31.813261272780263 20.685566892616972 49 21.255065078791606 25.476456533330467 31.90398611795707 21.364492269920852 50 19.95234763128241 30.563125286243263 28.58957449980458 20.89495258266974 >>END_MODULE >>Per sequence GC content fail #GC Content Count 0 2038.0 1 5199.0 2 8360.0 3 24474.5 4 40589.0 5 28665.5 6 16742.0 7 16263.0 8 15784.0 9 16057.5 10 16331.0 11 15805.5 12 15280.0 13 14138.0 14 12996.0 15 12419.0 16 11842.0 17 11164.0 18 10486.0 19 11249.5 20 12013.0 21 12786.5 22 13560.0 23 15689.5 24 17819.0 25 18691.0 26 19563.0 27 23987.0 28 28411.0 29 32924.0 30 37437.0 31 47462.5 32 57488.0 33 63950.5 34 70413.0 35 79688.5 36 88964.0 37 98538.0 38 108112.0 39 125753.0 40 143394.0 41 178707.0 42 214020.0 43 244056.0 44 274092.0 45 279188.0 46 284284.0 47 272659.5 48 261035.0 49 245048.5 50 229062.0 51 217068.0 52 205074.0 53 193586.0 54 182098.0 55 168231.0 56 154364.0 57 141419.5 58 128475.0 59 114943.0 60 101411.0 61 88897.0 62 76383.0 63 62593.5 64 48804.0 65 39015.5 66 29227.0 67 22610.0 68 15993.0 69 13155.0 70 10317.0 71 8546.0 72 6775.0 73 5451.5 74 4128.0 75 3097.5 76 2067.0 77 1729.5 78 1392.0 79 1081.0 80 770.0 81 570.5 82 371.0 83 290.0 84 209.0 85 180.5 86 152.0 87 108.0 88 64.0 89 41.5 90 19.0 91 15.0 92 11.0 93 8.0 94 5.0 95 7.5 96 10.0 97 5.5 98 1.0 99 1.0 100 1.0 >>END_MODULE >>Per base N content pass #Base N-Count 1 0.0 2 0.0 3 0.0 4 0.0 5 0.0 6 0.0 7 0.0 8 0.0 9 0.0 10 0.0 11 0.0 12 0.0 13 0.0 14 0.0 15 0.0 16 0.0 17 0.0 18 0.0 19 0.0 20 0.0 21 0.0 22 0.0 23 0.0 24 0.0 25 0.0 26 0.0 27 0.0 28 0.0 29 0.0 30 0.0 31 0.0 32 0.0 33 0.0 34 0.0 35 0.0 36 0.0 37 0.0 38 0.0 39 0.0 40 0.0 41 0.0 42 0.0 43 0.0 44 0.0 45 0.0 46 0.0 47 0.0 48 0.0 49 0.0 50 0.0 >>END_MODULE >>Sequence Length Distribution pass #Length Count 50 2978236.0 >>END_MODULE >>Sequence Duplication Levels fail #Total Deduplicated Percentage 15.789913149714074 #Duplication Level Percentage of deduplicated Percentage of total 1 79.66588121917812 12.579173454462603 2 7.98957796510835 2.523094843438603 3 2.6571348432611765 1.2586778520651927 4 1.3233572303516934 0.835827829331976 5 0.8043683580720776 0.6350453257168108 6 0.5947197241583693 0.5634343675729536 7 0.42118392915118347 0.4655320362946759 8 0.3297979051635506 0.41659842235920824 9 0.29133910430502596 0.41401972386826646 >10 3.2602923798778023 12.151002031631768 >50 1.0192351293061854 11.508815386535689 >100 1.6202882190285313 53.11819178449419 >500 0.019594182702342804 1.8977533795047161 >1k 0.0027991689574775433 0.5836599710838344 >5k 0.0 0.0 >10k+ 4.306413780734682E-4 1.0491735916395435 >>END_MODULE >>Overrepresented sequences warn #Sequence Count Percentage Possible Source CGTTTTTTTTTTTTTTTTTTTTTTTTTTTTTTTTTTTTTTTTTTTTTTTT 20840 0.6997430693873824 No Hit GACCAGAAAAATGGTCCTGCCAAGCGGCTACAGTGTTCTTCTTTCAGATA 10019 0.3364071886848457 No Hit >>END_MODULE >>Adapter Content pass #Position Illumina Universal Adapter Illumina Small RNA 3' Adapter Illumina Small RNA 5' Adapter Nextera Transposase Sequence SOLID Small RNA Adapter 1 0.0 0.0 0.0 0.03982223034037598 0.0 2 0.0 0.0 0.0 0.1484435753244538 0.0 3 0.0 0.0 0.0 0.2084455362167404 0.0 4 0.0 0.0 0.0 0.298062342943944 0.0 5 0.0 0.0 0.0 0.5372979172906378 0.0 6 0.0 0.0 0.0 0.7172366461220668 0.0 7 0.0 0.0 0.0 0.8472129139530917 0.0 8 0.0 0.0 0.0 1.1132764495493306 0.0 9 0.0 0.0 0.0 1.212999910013847 0.0 10 3.357692271532545E-5 0.0 0.0 1.4520675997469643 0.0 11 3.357692271532545E-5 0.0 0.0 1.6577262513783326 0.0 12 3.357692271532545E-5 0.0 0.0 1.859053479979424 0.0 13 3.357692271532545E-5 0.0 0.0 1.9294642869134615 0.0 14 3.357692271532545E-5 0.0 0.0 1.9599185558162617 0.0 15 3.357692271532545E-5 0.0 0.0 2.006590478390564 0.0 16 3.357692271532545E-5 0.0 0.0 2.104366477337592 0.0 17 3.357692271532545E-5 0.0 0.0 2.2165133992067787 0.0 18 3.357692271532545E-5 0.0 0.0 2.387520666595931 0.0 19 3.357692271532545E-5 0.0 0.0 2.4590395119795745 0.0 20 3.357692271532545E-5 0.0 0.0 2.547111780261873 0.0 21 3.357692271532545E-5 0.0 0.0 2.662515663634447 0.0 22 3.357692271532545E-5 0.0 0.0 2.7838962392503483 0.0 23 3.357692271532545E-5 0.0 0.0 2.9113542378777235 0.0 24 3.357692271532545E-5 0.0 0.0 3.003119967658708 0.0 25 3.357692271532545E-5 0.0 0.0 3.0878009667467587 0.0 26 3.357692271532545E-5 0.0 0.0 3.1773506196285317 0.0 27 3.357692271532545E-5 0.0 0.0 3.280230310828289 0.0 28 3.357692271532545E-5 0.0 0.0 3.382169848192017 0.0 29 3.357692271532545E-5 3.357692271532545E-5 0.0 3.5073781929974657 0.0 30 3.357692271532545E-5 3.357692271532545E-5 0.0 3.635239114697425 0.0 31 3.357692271532545E-5 3.357692271532545E-5 0.0 3.7519524980558963 0.0 32 3.357692271532545E-5 3.357692271532545E-5 0.0 3.8621855353303096 0.0 33 3.357692271532545E-5 3.357692271532545E-5 0.0 3.9742317264313507 0.0 34 3.357692271532545E-5 3.357692271532545E-5 0.0 4.100279494304682 0.0 35 3.357692271532545E-5 3.357692271532545E-5 0.0 4.249159569624435 0.0 36 3.357692271532545E-5 3.357692271532545E-5 0.0 4.371782491380804 0.0 37 3.357692271532545E-5 3.357692271532545E-5 0.0 4.501993797670836 0.0 38 3.357692271532545E-5 3.357692271532545E-5 0.0 4.658663719060544 0.0 >>END_MODULE >>Kmer Content fail #Sequence Count PValue Obs/Exp Max Max Obs/Exp Position TCCGCAT 40 8.3200575E-9 44.000004 28 CGTCTAC 20 7.858501E-4 44.000004 29 ATCGTAC 30 2.5290792E-6 44.000004 10 GCGTAAT 20 7.858501E-4 44.000004 5 TCGCAAA 25 4.4445515E-5 44.0 39 CGCGATT 35 1.4471152E-7 44.0 14 CGTTTTT 11840 0.0 41.565876 1 CTATGCG 70 0.0 40.857143 1 CGTAAGG 555 0.0 40.82883 2 TCGACAG 60 3.6379788E-12 40.333336 1 CGTTAGG 585 0.0 40.23932 2 AATCTCG 110 0.0 40.0 18 CGGTCTA 560 0.0 39.678574 31 GTTTACG 100 0.0 39.600002 1 ATTCACG 50 1.3496901E-9 39.600002 1 CACAACG 200 0.0 39.600002 12 CTAGACG 135 0.0 39.11111 1 CGACGGT 570 0.0 38.982452 28 CTACGCG 40 4.127487E-7 38.500004 1 TACACCG 40 4.127487E-7 38.500004 15 >>END_MODULE