##FastQC 0.11.5 >>Basic Statistics pass #Measure Value Filename SRR1545830_1.fastq.gz File type Conventional base calls Encoding Illumina 1.5 Total Sequences 5984288 Sequences flagged as poor quality 0 Sequence length 50 %GC 45 >>END_MODULE >>Per base sequence quality pass #Base Mean Median Lower Quartile Upper Quartile 10th Percentile 90th Percentile 1 31.668819415108363 31.0 31.0 33.0 30.0 34.0 2 32.089106005593315 33.0 31.0 34.0 30.0 34.0 3 32.14174117288473 33.0 31.0 34.0 30.0 34.0 4 35.85236856915977 37.0 35.0 37.0 35.0 37.0 5 35.844702828473494 37.0 35.0 37.0 35.0 37.0 6 35.89949898801662 37.0 35.0 37.0 35.0 37.0 7 36.071518616751064 37.0 35.0 37.0 35.0 37.0 8 36.004613247223396 37.0 35.0 37.0 35.0 37.0 9 37.80933354143384 39.0 38.0 39.0 35.0 39.0 10 37.483444479944815 39.0 37.0 39.0 35.0 39.0 11 37.294441711361486 39.0 37.0 39.0 34.0 39.0 12 36.80701898036993 39.0 35.0 39.0 33.0 39.0 13 36.62738390933057 39.0 35.0 39.0 33.0 39.0 14 37.71188635974739 40.0 35.0 41.0 33.0 41.0 15 37.82287667304782 40.0 35.0 41.0 33.0 41.0 16 37.87275963322621 40.0 35.0 41.0 33.0 41.0 17 37.77780080103096 40.0 35.0 41.0 33.0 41.0 18 37.68581592329781 39.0 36.0 41.0 33.0 41.0 19 37.61268558598784 39.0 36.0 41.0 33.0 41.0 20 37.484213995048364 39.0 35.0 41.0 33.0 41.0 21 37.40485969258164 39.0 35.0 41.0 33.0 41.0 22 37.43854356608505 39.0 35.0 41.0 33.0 41.0 23 37.43295693656455 39.0 35.0 41.0 33.0 41.0 24 37.401097507339216 39.0 35.0 41.0 33.0 41.0 25 37.317517973733885 39.0 35.0 41.0 33.0 41.0 26 37.21989048655412 39.0 35.0 41.0 33.0 41.0 27 37.1226570312124 39.0 35.0 41.0 32.0 41.0 28 37.075390422386086 39.0 35.0 41.0 32.0 41.0 29 36.99490281884829 39.0 35.0 41.0 32.0 41.0 30 36.86971917126983 39.0 35.0 41.0 32.0 41.0 31 36.73187353282462 39.0 35.0 41.0 31.0 41.0 32 36.58243587207033 39.0 35.0 41.0 31.0 41.0 33 36.38954325059222 39.0 35.0 41.0 30.0 41.0 34 36.17771270366667 39.0 35.0 41.0 30.0 41.0 35 35.93995743520365 39.0 35.0 41.0 29.0 41.0 36 35.81986779379602 38.0 35.0 41.0 29.0 41.0 37 35.77047962932265 38.0 35.0 41.0 29.0 41.0 38 35.65682734520799 38.0 35.0 41.0 28.0 41.0 39 35.564638767385524 38.0 35.0 41.0 27.0 41.0 40 35.441960848141 38.0 35.0 41.0 26.0 41.0 41 35.32225170312659 38.0 35.0 40.0 26.0 41.0 42 35.3013461250528 38.0 35.0 40.0 26.0 41.0 43 35.230383631269085 38.0 35.0 40.0 26.0 41.0 44 35.10311636070991 38.0 34.0 40.0 25.0 41.0 45 34.98929613681695 38.0 34.0 40.0 24.0 41.0 46 34.91777250693817 38.0 34.0 40.0 24.0 41.0 47 34.83850760524894 37.0 34.0 40.0 24.0 41.0 48 34.764072685004464 37.0 34.0 40.0 24.0 41.0 49 34.700531625483265 37.0 34.0 40.0 24.0 41.0 50 34.55239253191023 37.0 34.0 40.0 24.0 41.0 >>END_MODULE >>Per sequence quality scores pass #Quality Count 9 1.0 10 6.0 11 5.0 12 19.0 13 32.0 14 43.0 15 124.0 16 306.0 17 858.0 18 1980.0 19 3843.0 20 7001.0 21 11332.0 22 17436.0 23 25598.0 24 37448.0 25 56440.0 26 83141.0 27 104043.0 28 109467.0 29 113308.0 30 124795.0 31 144665.0 32 176819.0 33 231443.0 34 413786.0 35 713920.0 36 366988.0 37 498558.0 38 857403.0 39 1883480.0 >>END_MODULE >>Per base sequence content fail #Base G A T C 1 33.48050762262778 22.807909646059816 28.61276061579924 15.098822115513158 2 32.328891924987566 24.974834098893638 29.5356774272896 13.1605965488292 3 28.712722382345234 24.27867776417178 33.52661168713805 13.481988166344935 4 25.413833692496084 26.4932937719575 33.0794072745162 15.013465261030218 5 22.608570977867377 31.10667467875878 31.996588399488797 14.288165943885053 6 19.865504467699417 41.42920594730735 28.30816297611345 10.397126608879786 7 85.76046139490613 3.8415263436519096 8.578831767455043 1.8191804939869205 8 86.90153281392874 3.0825722291440516 8.138111000005347 1.8777839569218593 9 82.46105468186023 4.325209615579999 9.746038292274703 3.4676974102850666 10 42.01283427535573 24.423072552657892 19.85511058291312 13.708982589073255 11 35.74131124705228 22.869871904560743 25.53869399333722 15.850122855049756 12 33.12161780983803 21.80125689137956 28.516742509718785 16.560382789063627 13 22.498633087177623 29.835596147778986 29.366484367062544 18.299286397980847 14 18.299620606494873 31.765382949483715 31.522346518082017 18.41264992593939 15 18.17880422867349 23.54704519568577 41.006148099824074 17.268002475816672 16 20.612627600810658 21.20985821538001 38.07401983327006 20.10349435053928 17 20.227903469886478 21.651982658588622 31.13125571496559 26.98885815655931 18 22.369294392248502 23.11533134768915 34.41582356998861 20.099550690073738 19 26.058455074354708 25.005664834312785 28.634300354528392 20.30157973680411 20 26.814651968621835 24.232339753701694 29.36685199642798 19.586156281248496 21 23.242079926634545 26.29174932757247 31.037627199760436 19.428543546032547 22 22.25718414621756 22.9554125737264 30.029503927618457 24.757899352437583 23 19.983095733360425 26.98127162329086 30.718424648011595 22.317207995337125 24 21.00462076691496 23.798303156532576 35.919862145672134 19.277213930880333 25 20.667270692854355 25.968669957060893 32.34170882150057 21.022350528584184 26 19.939932703773618 28.54474918319439 29.09519060579972 22.42012750723227 27 18.907997075007085 28.761633798373342 30.80262848312113 21.52774064349844 28 17.551812345929875 26.418397643963658 35.081299563122634 20.948490446983836 29 19.204256212267858 25.113129581998727 34.34923252356838 21.33338168216503 30 20.960404980508958 27.377208449860703 32.60663591057115 19.05575065905919 31 25.34067544877519 25.65613486516692 29.241206305578878 19.761983380479016 32 26.407084685763788 25.48393392831361 28.74124707901759 19.367734306905014 33 25.040990674245624 25.890782662866492 28.01145265735874 21.056774005529146 34 20.126020004384813 26.58877714441551 31.298092605168737 21.987110246030937 35 20.83038115812608 26.202632627306706 31.522262965953512 21.444723248613702 36 25.48390050746221 27.82553246100455 27.242455577004314 19.448111454528927 37 21.1620831082996 29.437386703313745 29.848730542380313 19.551799646006344 38 21.939903293424383 29.209222550786322 27.318621697351464 21.532252458437828 39 21.034114668277997 28.284300488211798 28.648036324454974 22.03354851905523 40 22.950366025164566 25.764752632226255 29.330439978824547 21.95444136378463 41 19.08925506259057 25.59275222048137 29.225247849034 26.09274486789406 42 21.316220074969657 26.315544973771317 27.81306648343128 24.55516846782775 43 21.185761781518536 25.62154428396494 28.924142688319815 24.268551246196708 44 20.623823586030618 27.412200081279508 29.596486666417128 22.367489666272746 45 20.013776074948264 30.5231466132646 27.417731232186686 22.04534607960045 46 21.578339812522394 29.80306094893829 27.64840194856932 20.970197289970002 47 20.90561149463395 27.61733726719035 29.50929166510703 21.967759573068676 48 21.04043120919314 26.577681421749755 30.862217861172457 21.519669507884647 49 20.95679552855745 25.925423375345574 31.629293242571215 21.48848785352577 50 20.417700485003394 28.990432947077416 29.31080522862536 21.28106133929383 >>END_MODULE >>Per sequence GC content fail #GC Content Count 0 3015.0 1 8114.0 2 13213.0 3 49811.0 4 86409.0 5 60727.0 6 35045.0 7 33909.0 8 32773.0 9 32151.0 10 31529.0 11 30476.5 12 29424.0 13 27955.0 14 26486.0 15 25271.0 16 24056.0 17 22524.5 18 20993.0 19 19843.0 20 18693.0 21 20811.0 22 22929.0 23 25827.5 24 28726.0 25 31333.5 26 33941.0 27 44661.0 28 55381.0 29 65371.0 30 75361.0 31 93346.5 32 111332.0 33 131520.0 34 151708.0 35 168962.0 36 186216.0 37 203879.5 38 221543.0 39 256315.5 40 291088.0 41 348174.0 42 405260.0 43 466768.5 44 528277.0 45 536848.0 46 545419.0 47 529930.0 48 514441.0 49 496671.0 50 478901.0 51 457008.5 52 435116.0 53 400473.0 54 365830.0 55 339404.0 56 312978.0 57 291883.0 58 270788.0 59 243163.5 60 215539.0 61 186334.5 62 157130.0 63 129921.0 64 102712.0 65 79920.5 66 57129.0 67 46478.5 68 35828.0 69 29910.5 70 23993.0 71 19780.0 72 15567.0 73 12309.5 74 9052.0 75 7002.0 76 4952.0 77 3611.0 78 2270.0 79 1914.0 80 1558.0 81 1259.0 82 960.0 83 663.5 84 367.0 85 260.5 86 154.0 87 119.0 88 84.0 89 78.0 90 72.0 91 49.5 92 27.0 93 19.0 94 11.0 95 10.5 96 10.0 97 5.5 98 1.0 99 1.0 100 1.0 >>END_MODULE >>Per base N content pass #Base N-Count 1 0.0 2 0.0 3 0.0 4 0.0 5 0.0 6 0.0 7 0.0 8 0.0 9 0.0 10 0.0 11 0.0 12 0.0 13 0.0 14 0.0 15 0.0 16 0.0 17 0.0 18 0.0 19 0.0 20 0.0 21 0.0 22 0.0 23 0.0 24 0.0 25 0.0 26 0.0 27 0.0 28 0.0 29 0.0 30 0.0 31 0.0 32 0.0 33 0.0 34 0.0 35 0.0 36 0.0 37 0.0 38 0.0 39 0.0 40 0.0 41 0.0 42 0.0 43 0.0 44 0.0 45 0.0 46 0.0 47 0.0 48 0.0 49 0.0 50 0.0 >>END_MODULE >>Sequence Length Distribution pass #Length Count 50 5984288.0 >>END_MODULE >>Sequence Duplication Levels fail #Total Deduplicated Percentage 14.48422479833762 #Duplication Level Percentage of deduplicated Percentage of total 1 79.27158507199718 11.481874583033518 2 8.328118084030999 2.4125266895241153 3 2.7880843639609036 1.2114972205301966 4 1.4399402243120856 0.8342567162041977 5 0.8859374958940668 0.6416058923902986 6 0.5628026043765361 0.4891055663327772 7 0.4439031983180514 0.4500715599197792 8 0.33650203830833536 0.3899176934365397 9 0.28367963302448485 0.3697991617892903 >10 3.000203273262194 10.152818419226849 >50 0.9718830571831335 10.09698039494551 >100 1.6061048421656694 52.54675324239631 >500 0.07644180588349207 6.533927425637579 >1k 0.004109774509865064 0.9513588817801297 >5k 3.5226638655986263E-4 0.31477823594376964 >10k+ 3.5226638655986263E-4 1.122728316909232 >>END_MODULE >>Overrepresented sequences warn #Sequence Count Percentage Possible Source CGTTTTTTTTTTTTTTTTTTTTTTTTTTTTTTTTTTTTTTTTTTTTTTTT 43391 0.7250820816110454 No Hit GAATGATACCTGTCTCTTATACACATCTGACGCAAGTCTTCTCGTATGCC 12603 0.21060149511520834 No Hit GACCAGAAAAATGGTCCTGCCAAGCGGCTACAGTGTTCTTCTTTCAGATA 10019 0.16742175510269558 No Hit GAATCTGTCTCTTATACACATCTGACGCAAGTCTTCTCGTATGCCGTCTT 7902 0.13204578389275382 No Hit >>END_MODULE >>Adapter Content warn #Position Illumina Universal Adapter Illumina Small RNA 3' Adapter Illumina Small RNA 5' Adapter Nextera Transposase Sequence SOLID Small RNA Adapter 1 0.0 0.0 0.0 0.033337299274366475 0.0 2 0.0 0.0 0.0 0.14218901229352598 0.0 3 0.0 0.0 0.0 0.20119352544529942 0.0 4 1.671042570143683E-5 0.0 0.0 0.31555967894593306 0.0 5 1.671042570143683E-5 0.0 0.0 0.649166617649418 0.0 6 1.671042570143683E-5 0.0 0.0 0.8451297798501677 0.0 7 1.671042570143683E-5 0.0 0.0 1.012735349635579 0.0 8 1.671042570143683E-5 0.0 0.0 1.337853392082734 0.0 9 1.671042570143683E-5 0.0 0.0 1.4740600719751455 0.0 10 1.671042570143683E-5 0.0 0.0 1.925893272516296 0.0 11 1.671042570143683E-5 0.0 0.0 2.1438473549401365 0.0 12 1.671042570143683E-5 0.0 0.0 2.4218419969092397 0.0 13 1.671042570143683E-5 0.0 0.0 2.5073826660748946 0.0 14 1.671042570143683E-5 0.0 0.0 2.5391157644819233 0.0 15 1.671042570143683E-5 0.0 0.0 2.5952795052644526 0.0 16 1.671042570143683E-5 0.0 0.0 2.7010230791031447 0.0 17 1.671042570143683E-5 0.0 0.0 2.820068151800181 0.0 18 1.671042570143683E-5 0.0 0.0 2.99694800784989 0.0 19 1.671042570143683E-5 0.0 0.0 3.0815194723248616 0.0 20 1.671042570143683E-5 0.0 0.0 3.1739448368795085 0.0 21 1.671042570143683E-5 0.0 0.0 3.292856226170933 0.0 22 1.671042570143683E-5 0.0 0.0 3.4164465346587596 0.0 23 1.671042570143683E-5 0.0 0.0 3.555042805426477 0.0 24 1.671042570143683E-5 0.0 0.0 3.6636605724858162 0.0 25 1.671042570143683E-5 0.0 0.0 3.7552504157553916 0.0 26 1.671042570143683E-5 0.0 0.0 3.8468402590249666 0.0 27 1.671042570143683E-5 0.0 0.0 3.951046473699127 0.0 28 1.671042570143683E-5 0.0 0.0 4.05633886604388 0.0 29 3.342085140287366E-5 0.0 0.0 4.178675892604099 0.0 30 3.342085140287366E-5 0.0 0.0 4.3101033907459 0.0 31 3.342085140287366E-5 0.0 0.0 4.420576015058098 0.0 32 5.013127710431049E-5 0.0 0.0 4.5280240523183375 0.0 33 5.013127710431049E-5 0.0 0.0 4.642256522413359 0.0 34 5.013127710431049E-5 0.0 0.0 4.766782614740467 0.0 35 5.013127710431049E-5 0.0 0.0 4.9109935885438665 0.0 36 5.013127710431049E-5 0.0 0.0 5.034065873834949 0.0 37 5.013127710431049E-5 0.0 0.0 5.165409819848243 0.0 38 5.013127710431049E-5 0.0 0.0 5.31750811458272 0.0 >>END_MODULE >>Kmer Content warn #Sequence Count PValue Obs/Exp Max Max Obs/Exp Position GTCGAAC 25 4.4450935E-5 44.0 32 CGTTTTT 25895 0.0 41.918518 1 ACGGGTA 785 0.0 39.79618 5 CTATGCG 100 0.0 39.6 1 CACGACG 950 0.0 39.368423 26 TACGGGA 1490 0.0 39.275166 4 CGACGGT 965 0.0 38.98446 28 CGGTCTA 970 0.0 38.783504 31 GCGCGAC 1750 0.0 37.714287 9 ATAGCGG 1030 0.0 37.59223 2 GGGCGAT 7445 0.0 37.558094 7 TCGTCCC 2220 0.0 37.162163 38 CTTAACG 225 0.0 37.155556 1 TCGCTAT 285 0.0 37.052628 23 AGGGCGA 4020 0.0 36.99502 6 TAGGGCG 2350 0.0 36.697872 5 TAGCGGG 4065 0.0 36.69373 3 GTACGTC 30 1.30175E-4 36.666664 10 CACGCTA 115 0.0 36.347824 36 ACGGTCT 1035 0.0 36.347824 30 >>END_MODULE