##FastQC 0.11.5 >>Basic Statistics pass #Measure Value Filename SRR1545825_1.fastq.gz File type Conventional base calls Encoding Illumina 1.5 Total Sequences 1573475 Sequences flagged as poor quality 0 Sequence length 50 %GC 45 >>END_MODULE >>Per base sequence quality pass #Base Mean Median Lower Quartile Upper Quartile 10th Percentile 90th Percentile 1 31.70451198779771 31.0 31.0 33.0 30.0 34.0 2 32.123506887621346 33.0 31.0 34.0 30.0 34.0 3 32.173850871478734 33.0 31.0 34.0 30.0 34.0 4 35.873896312302385 37.0 35.0 37.0 35.0 37.0 5 35.85132525143393 37.0 35.0 37.0 35.0 37.0 6 35.89635361222771 37.0 35.0 37.0 35.0 37.0 7 36.06909102464291 37.0 35.0 37.0 35.0 37.0 8 36.000008261967935 37.0 35.0 37.0 35.0 37.0 9 37.72255485470058 39.0 38.0 39.0 35.0 39.0 10 37.56432609351912 39.0 37.0 39.0 35.0 39.0 11 37.29755604633058 39.0 37.0 39.0 34.0 39.0 12 36.36774591270913 38.0 35.0 39.0 33.0 39.0 13 36.08299845882521 38.0 35.0 39.0 33.0 39.0 14 37.03473585535201 39.0 35.0 41.0 33.0 41.0 15 37.24382402008294 39.0 35.0 41.0 33.0 41.0 16 37.34184909197795 39.0 35.0 41.0 33.0 41.0 17 37.28250337628497 38.0 35.0 41.0 33.0 41.0 18 37.22649549563864 38.0 35.0 41.0 33.0 41.0 19 37.12473537870001 38.0 35.0 41.0 33.0 41.0 20 36.94623174820064 38.0 35.0 41.0 33.0 41.0 21 36.79676512178459 38.0 35.0 41.0 32.0 41.0 22 36.78921050541 38.0 35.0 41.0 33.0 41.0 23 36.7837760371153 38.0 35.0 41.0 33.0 41.0 24 36.76431465387121 38.0 35.0 41.0 33.0 41.0 25 36.67722652091708 38.0 35.0 41.0 33.0 41.0 26 36.56762897408602 37.0 35.0 41.0 32.0 41.0 27 36.465083334657365 37.0 35.0 41.0 32.0 41.0 28 36.464593971941085 37.0 35.0 41.0 32.0 41.0 29 36.435637680929155 37.0 35.0 41.0 32.0 41.0 30 36.3618163618742 37.0 35.0 40.0 32.0 41.0 31 36.165728085924464 37.0 35.0 40.0 31.0 41.0 32 35.97149875276061 37.0 35.0 40.0 31.0 41.0 33 35.811366561273616 37.0 35.0 40.0 30.0 41.0 34 35.62914695181048 37.0 35.0 40.0 30.0 41.0 35 35.4463820524635 37.0 35.0 40.0 29.0 41.0 36 35.25999459794404 36.0 35.0 40.0 28.0 41.0 37 35.188902905988336 36.0 34.0 40.0 28.0 41.0 38 35.13282003209457 36.0 34.0 40.0 28.0 41.0 39 35.09424553933174 36.0 35.0 40.0 27.0 41.0 40 34.918420693052006 36.0 34.0 40.0 26.0 41.0 41 34.869294396161365 36.0 34.0 40.0 26.0 41.0 42 34.84108613101574 36.0 34.0 40.0 26.0 41.0 43 34.741704825307046 35.0 34.0 40.0 26.0 41.0 44 34.616262095044405 35.0 34.0 40.0 26.0 41.0 45 34.50131651281399 35.0 34.0 40.0 25.0 41.0 46 34.46128282940625 35.0 34.0 40.0 25.0 41.0 47 34.41587505362335 35.0 34.0 40.0 25.0 41.0 48 34.365302276807704 35.0 34.0 40.0 24.0 41.0 49 34.31889670951239 36.0 34.0 40.0 24.0 41.0 50 34.1416978344111 35.0 34.0 40.0 24.0 41.0 >>END_MODULE >>Per sequence quality scores pass #Quality Count 9 1.0 10 2.0 11 5.0 12 8.0 13 10.0 14 19.0 15 43.0 16 98.0 17 244.0 18 599.0 19 1370.0 20 2380.0 21 3349.0 22 4932.0 23 7453.0 24 10452.0 25 15513.0 26 21973.0 27 27464.0 28 29096.0 29 30012.0 30 33319.0 31 39753.0 32 49968.0 33 67627.0 34 138851.0 35 301659.0 36 85412.0 37 107888.0 38 181813.0 39 412162.0 >>END_MODULE >>Per base sequence content fail #Base G A T C 1 33.383371200686376 23.137450547355375 29.32731692591239 14.151861326045854 2 32.634264923179586 25.09935016444494 29.269483150351927 12.996901762023546 3 28.65644512941102 24.529020162379446 32.12685298463592 14.68768172357362 4 27.134463528178077 27.340377190613136 31.16986288310904 14.355296398099748 5 23.45204086496449 31.96701568185068 30.27007102114746 14.31087243203737 6 22.224375983094742 40.606237785792594 26.960580879899588 10.20880535121308 7 84.40451866092566 5.466562862454123 8.302705794499436 1.8262126821207834 8 85.13208026819619 4.331876896677735 8.422758543987035 2.1132842911390393 9 80.0748025866315 6.780469978868428 9.643432529909912 3.501294904590159 10 52.71281717218259 22.06657239549405 15.011360205913663 10.209250226409699 11 48.07880646340107 18.829152036098446 20.967222231049114 12.124819269451374 12 43.628656318022216 20.374521361953637 23.659162045790367 12.337660274233782 13 21.168115159122326 40.85702028948665 23.513497195697422 14.461367355693607 14 14.14093010692893 42.672492413289056 28.907608954702173 14.278968525079838 15 14.206962296827086 21.776132445701393 50.064983555506124 13.951921701965395 16 15.720618376523301 16.729913090452662 48.400006355359956 19.149462177664088 17 15.383657191884206 17.547212380241188 30.000413098396862 37.06871732947775 18 20.965252069464086 22.141629196523617 36.47499960279001 20.418119131222294 19 29.3064077916713 22.728991563259665 27.01542763628275 20.949173008786286 20 30.62425523125566 21.555347240979362 26.490284243473837 21.330113284291137 21 21.277554457490584 27.595608446273374 29.664850092947137 21.4619870032889 22 22.304898393682773 24.320882123961297 26.47776418436899 26.896455297986936 23 18.40258027614039 29.060963790336675 27.80387359189056 24.732582341632376 24 19.00799186513926 22.462447766885397 41.63809402755049 16.891466340424856 25 16.63375649438345 24.08706843133828 38.31646514879486 20.962709925483406 26 15.638507125947346 33.967174565849476 29.327444033111426 21.066874275091756 27 16.746055704729976 33.91245491666534 30.289899744196763 19.05158963440792 28 14.654570298225266 27.539681278698424 40.24944787810419 17.556300544972117 29 15.386008675066334 24.554632262984793 38.79635837874768 21.263000683201195 30 17.863455091437743 31.176536011058325 31.97934508015698 18.980663817346954 31 29.325855193123502 27.11603298431815 24.73201035923672 18.826101463321628 32 29.94168957244316 26.440712435850582 27.056101939973626 16.56149605173263 33 27.943882171626495 27.800695911914712 25.600470296636423 18.65495161982237 34 18.716344396955783 27.920303786205693 29.510287738921814 23.853064077916713 35 20.699598023483055 26.136608462161774 32.20114714247128 20.962646371883885 36 29.027280382592668 26.320341918365404 26.148810753269036 18.503566945772892 37 20.340837954209633 33.50660163014983 28.55386961979059 17.59869079584995 38 20.50544177695864 33.93927453566151 24.62447766885397 20.930806018525875 39 21.513783186895246 31.201512575668506 27.003098237976452 20.281605999459796 40 24.38252911549278 26.350402770936938 25.789288040801413 23.477780072768873 41 17.05626082397242 25.595767330272167 27.748899728308363 29.59907211744705 42 21.942833537234467 25.271262651138404 24.66693147333132 28.118972338295812 43 22.18535407299131 26.812246778626925 26.190120592955086 24.812278555426683 44 19.82224058215097 30.08811706573031 28.99118193806702 21.0984604140517 45 17.39557349179364 38.09104053130809 22.69607079870986 21.817315178188405 46 21.032237563354993 33.71683693735204 26.076041881822082 19.174883617470883 47 22.660035907783726 27.821033063760147 26.651329064649897 22.867601963806226 48 22.35485152290313 24.481545623540253 32.39587537139135 20.76772748216527 49 20.347129760561813 25.26884761435676 33.024484024213926 21.359538600867506 50 19.40424855812771 33.722111886111946 27.331161918683165 19.54247763707717 >>END_MODULE >>Per sequence GC content fail #GC Content Count 0 1025.0 1 2294.5 2 3564.0 3 11285.0 4 19006.0 5 13953.5 6 8901.0 7 8668.5 8 8436.0 9 8586.5 10 8737.0 11 8386.0 12 8035.0 13 7395.5 14 6756.0 15 6453.5 16 6151.0 17 5345.5 18 4540.0 19 4564.0 20 4588.0 21 5468.0 22 6348.0 23 5525.5 24 4703.0 25 7300.5 26 9898.0 27 13402.0 28 16906.0 29 20316.0 30 23726.0 31 26079.0 32 28432.0 33 32875.5 34 37319.0 35 40038.0 36 42757.0 37 45561.0 38 48365.0 39 58215.5 40 68066.0 41 100048.0 42 132030.0 43 152939.0 44 173848.0 45 173545.5 46 173243.0 47 155887.0 48 138531.0 49 128849.0 50 119167.0 51 113549.5 52 107932.0 53 97283.0 54 86634.0 55 79747.5 56 72861.0 57 66637.0 58 60413.0 59 54868.0 60 49323.0 61 41698.0 62 34073.0 63 28512.5 64 22952.0 65 18034.0 66 13116.0 67 10504.5 68 7893.0 69 6951.5 70 6010.0 71 4809.5 72 3609.0 73 2922.5 74 2236.0 75 1937.5 76 1639.0 77 1248.5 78 858.0 79 616.0 80 374.0 81 319.5 82 265.0 83 175.5 84 86.0 85 64.5 86 43.0 87 34.5 88 26.0 89 24.5 90 23.0 91 20.0 92 17.0 93 12.0 94 7.0 95 6.0 96 5.0 97 3.5 98 2.0 99 1.0 100 0.0 >>END_MODULE >>Per base N content pass #Base N-Count 1 0.0 2 0.0 3 0.0 4 0.0 5 0.0 6 0.0 7 0.0 8 0.0 9 0.0 10 0.0 11 0.0 12 0.0 13 0.0 14 0.0 15 0.0 16 0.0 17 0.0 18 0.0 19 0.0 20 0.0 21 0.0 22 0.0 23 0.0 24 0.0 25 0.0 26 0.0 27 0.0 28 0.0 29 0.0 30 0.0 31 0.0 32 0.0 33 0.0 34 0.0 35 0.0 36 0.0 37 0.0 38 0.0 39 0.0 40 0.0 41 0.0 42 0.0 43 0.0 44 0.0 45 0.0 46 0.0 47 0.0 48 0.0 49 0.0 50 0.0 >>END_MODULE >>Sequence Length Distribution pass #Length Count 50 1573475.0 >>END_MODULE >>Sequence Duplication Levels fail #Total Deduplicated Percentage 14.46294984753865 #Duplication Level Percentage of deduplicated Percentage of total 1 80.81652248434375 11.688453115435435 2 7.27466202924765 2.1042614417360506 3 2.304002164684616 0.9996800326936226 4 1.117926777211564 0.6467407564812546 5 0.7177565848293047 0.5190438744563428 6 0.4921715388334535 0.42709513695204954 7 0.35970358523632007 0.3641662439276919 8 0.3013444827188202 0.34866641123158193 9 0.26660839138867354 0.34703494142286073 >10 3.3290936741477095 11.637216751362727 >50 1.0854289554696346 11.35362572033103 >100 1.9139227656961193 55.947711660881836 >500 0.016418998917402366 1.531919889636995 >1k 0.0035500538199788904 0.9763751008021954 >5k 8.875134549947226E-4 1.1080089226483338 >10k+ 0.0 0.0 >>END_MODULE >>Overrepresented sequences warn #Sequence Count Percentage Possible Source CGTTTTTTTTTTTTTTTTTTTTTTTTTTTTTTTTTTTTTTTTTTTTTTTT 9643 0.6128473601423601 No Hit GACCAGAAAAATGGTCCTGCCAAGCGGCTACAGTGTTCTTCTTTCAGATA 7621 0.4843419819190009 No Hit AAGGAAGGAAGGAAGAAAGAAAGAAAGAAAGAAAGAAAGAAAGAAAGAAA 3853 0.24487201893897267 No Hit TGAATGATACCTGTCTCTTATACACATCTGACGCAAGATGGCTCGTATGC 2395 0.15221087084319737 No Hit AAGGAAGGAAGAAAGAAAGAAAGAAAGAAAGAAAGAAAGAAAGAAAGAAA 2014 0.12799694942722317 No Hit GATACTGAAGCTACGAATATACTGACTATGAAGACCTATGCTTTGATTCA 1679 0.10670649358903064 No Hit >>END_MODULE >>Adapter Content pass #Position Illumina Universal Adapter Illumina Small RNA 3' Adapter Illumina Small RNA 5' Adapter Nextera Transposase Sequence SOLID Small RNA Adapter 1 0.0 0.0 0.0 0.02980663817346955 0.0 2 0.0 0.0 0.0 0.10613451119337772 0.0 3 0.0 0.0 0.0 0.15189310284561242 0.0 4 0.0 0.0 0.0 0.2123961295857894 0.0 5 0.0 0.0 0.0 0.3941594242043884 0.0 6 0.0 0.0 0.0 0.5559033349751347 0.0 7 0.0 0.0 0.0 0.6528225742385484 0.0 8 0.0 0.0 0.0 0.8856829628688094 0.0 9 0.0 0.0 0.0 0.9839368277220801 0.0 10 0.0 0.0 0.0 1.148667757670125 0.0 11 0.0 0.0 0.0 1.4448275314193109 0.0 12 0.0 0.0 0.0 1.580323805589539 0.0 13 0.0 0.0 0.0 1.668472648119608 0.0 14 0.0 0.0 0.0 1.6904621935524873 0.0 15 0.0 0.0 0.0 1.728340138864615 0.0 16 0.0 0.0 0.0 1.8106420502391205 0.0 17 0.0 0.0 0.0 1.90088816155325 0.0 18 0.0 0.0 0.0 2.0521457284036924 0.0 19 0.0 0.0 0.0 2.098666963250131 0.0 20 0.0 0.0 0.0 2.158598007594655 0.0 21 0.0 0.0 0.0 2.2293967174565847 0.0 22 0.0 0.0 0.0 2.3055339296779422 0.0 23 0.0 0.0 0.0 2.391966825021052 0.0 24 0.0 0.0 0.0 2.454376459746739 0.0 25 0.0 0.0 0.0 2.506172643353088 0.0 26 0.0 0.0 0.0 2.5619727037290074 0.0 27 0.0 0.0 0.0 2.6163745849155533 0.0 28 6.355359951699264E-5 0.0 0.0 2.676114968461526 0.0 29 6.355359951699264E-5 0.0 0.0 2.740240550374172 0.0 30 6.355359951699264E-5 0.0 0.0 2.8212078361588206 0.0 31 6.355359951699264E-5 0.0 0.0 2.8972179411811436 0.0 32 6.355359951699264E-5 0.0 0.0 2.9687792942372773 0.0 33 6.355359951699264E-5 0.0 0.0 3.0373536281161124 0.0 34 6.355359951699264E-5 0.0 0.0 3.109614070766933 0.0 35 6.355359951699264E-5 0.0 0.0 3.2114269371931554 0.0 36 6.355359951699264E-5 0.0 0.0 3.29417372376428 0.0 37 6.355359951699264E-5 0.0 0.0 3.3746325807527926 0.0 38 6.355359951699264E-5 0.0 0.0 3.453439044153863 0.0 >>END_MODULE >>Kmer Content warn #Sequence Count PValue Obs/Exp Max Max Obs/Exp Position AGCGTAA 25 4.4435914E-5 44.0 34 ACTATCG 35 1.4465331E-7 44.0 29 ATTACTC 20 7.85737E-4 44.0 43 CTATACG 30 2.5283152E-6 44.0 1 CACGCTA 20 7.85737E-4 44.0 30 GTTAGTC 25 4.4435914E-5 44.0 43 CGCGATT 45 4.802132E-10 44.0 27 CCGCTTA 25 4.4435914E-5 44.0 16 TATGCGT 20 7.85737E-4 44.0 19 TCGATGC 25 4.4435914E-5 44.0 32 ACTTACG 85 0.0 44.0 1 CCGCTAA 20 7.85737E-4 44.0 36 CGTTACA 20 7.85737E-4 44.0 16 ACGATTG 80 0.0 44.0 1 TACGCCA 30 2.5283152E-6 44.0 14 TGCGCGT 50 2.7284841E-11 44.0 37 CGCTCAC 20 7.85737E-4 44.0 30 TACGATG 30 2.5283152E-6 44.0 35 TACGATA 35 1.4465331E-7 44.0 31 TGCGATA 30 2.5283152E-6 44.0 19 >>END_MODULE