##FastQC 0.11.5 >>Basic Statistics pass #Measure Value Filename SRR1545822_1.fastq.gz File type Conventional base calls Encoding Illumina 1.5 Total Sequences 2010779 Sequences flagged as poor quality 0 Sequence length 50 %GC 44 >>END_MODULE >>Per base sequence quality pass #Base Mean Median Lower Quartile Upper Quartile 10th Percentile 90th Percentile 1 31.78350927675294 31.0 31.0 33.0 30.0 34.0 2 32.19907458751061 33.0 31.0 34.0 30.0 34.0 3 32.22996012988001 34.0 31.0 34.0 30.0 34.0 4 35.90176742446584 37.0 35.0 37.0 35.0 37.0 5 35.89339753399056 37.0 35.0 37.0 35.0 37.0 6 35.949978093067415 37.0 35.0 37.0 35.0 37.0 7 36.15238472253788 37.0 35.0 37.0 35.0 37.0 8 36.11396677606042 37.0 35.0 37.0 35.0 37.0 9 37.933699824794274 39.0 39.0 39.0 35.0 39.0 10 37.682598137338815 39.0 38.0 39.0 35.0 39.0 11 37.36500580123425 39.0 37.0 39.0 35.0 39.0 12 36.20704164903254 37.0 35.0 39.0 33.0 39.0 13 35.826501072469924 37.0 35.0 39.0 33.0 39.0 14 36.71326834028006 38.0 35.0 41.0 33.0 41.0 15 36.972818494722695 38.0 35.0 41.0 33.0 41.0 16 37.14121641413601 38.0 35.0 41.0 33.0 41.0 17 37.06403935986998 38.0 35.0 41.0 33.0 41.0 18 37.04452105378065 38.0 35.0 41.0 33.0 41.0 19 36.96604350851088 37.0 35.0 41.0 33.0 41.0 20 36.788459099682264 36.0 35.0 41.0 33.0 41.0 21 36.638806154231766 36.0 35.0 41.0 33.0 41.0 22 36.62263480969316 36.0 35.0 41.0 33.0 41.0 23 36.6226417721689 36.0 35.0 41.0 33.0 41.0 24 36.57371247660733 36.0 35.0 41.0 33.0 41.0 25 36.5033884877453 36.0 35.0 40.0 33.0 41.0 26 36.39860074130474 36.0 35.0 40.0 33.0 41.0 27 36.32447126213273 36.0 35.0 40.0 32.0 41.0 28 36.33616474013305 36.0 35.0 40.0 32.0 41.0 29 36.33656508248793 36.0 35.0 40.0 32.0 41.0 30 36.280395806799255 36.0 35.0 40.0 32.0 41.0 31 36.09852450219542 36.0 35.0 40.0 32.0 41.0 32 35.88452087474556 35.0 35.0 40.0 31.0 41.0 33 35.72151191155269 36.0 35.0 40.0 31.0 41.0 34 35.548139800544966 36.0 35.0 40.0 30.0 41.0 35 35.35234752302466 36.0 35.0 40.0 30.0 41.0 36 35.17053937802215 35.0 35.0 40.0 29.0 41.0 37 35.06512301948648 35.0 34.0 40.0 29.0 41.0 38 35.05651491287705 35.0 34.0 40.0 29.0 41.0 39 35.04147646260479 35.0 35.0 40.0 29.0 41.0 40 34.825239372402436 35.0 34.0 40.0 27.0 41.0 41 34.818907498039316 35.0 34.0 40.0 27.0 41.0 42 34.78952485578972 35.0 34.0 40.0 27.0 41.0 43 34.69399272620213 35.0 34.0 40.0 27.0 41.0 44 34.55891075051012 35.0 34.0 40.0 27.0 41.0 45 34.44044024728724 35.0 34.0 40.0 26.0 41.0 46 34.432352834399005 35.0 34.0 40.0 27.0 41.0 47 34.401486190178034 35.0 34.0 40.0 26.0 41.0 48 34.380449069738646 35.0 34.0 40.0 26.0 41.0 49 34.36456070010677 35.0 34.0 40.0 26.0 41.0 50 34.14330664881621 35.0 34.0 40.0 24.0 41.0 >>END_MODULE >>Per sequence quality scores pass #Quality Count 10 2.0 11 4.0 12 5.0 13 8.0 14 9.0 15 44.0 16 106.0 17 246.0 18 550.0 19 1237.0 20 2231.0 21 3662.0 22 5769.0 23 8692.0 24 12605.0 25 19353.0 26 27667.0 27 34065.0 28 35824.0 29 36694.0 30 41342.0 31 49916.0 32 64435.0 33 87456.0 34 191417.0 35 454711.0 36 101218.0 37 122671.0 38 210157.0 39 498683.0 >>END_MODULE >>Per base sequence content fail #Base G A T C 1 32.51595525913091 22.91017560855768 29.932926492667768 14.64094263964364 2 31.22580850506197 25.60380827530027 30.164876398649476 13.005506820988282 3 28.862843703858054 24.561824049286372 33.354834121502165 13.220498125353409 4 25.303725571034906 27.078659564278322 32.227111979983874 15.390502884702894 5 22.392217145693287 33.09100602303883 30.488631520420697 14.02814531084719 6 20.559444871863093 39.80362834503444 28.43176699179771 11.205159791304762 7 85.64034138013177 4.939677607534194 7.542947285604236 1.8770337267297896 8 88.30731771119551 3.280519639403435 6.974709801524683 1.4374528478763704 9 84.87243003830854 4.572009156650234 8.186478971582655 2.369081833458575 10 57.953957147951115 20.71654816367189 12.956371635072776 8.373123053304218 11 52.952761094083435 16.913444988235902 19.776216083418415 10.357577834262244 12 46.768143092801346 20.941784253764336 22.186774379481783 10.103298273952532 13 19.830374198258486 47.02933539687852 22.233721358737085 10.906569046125904 14 12.79116203222731 47.1758955111427 28.096722712938615 11.936219743691376 15 11.101219974945034 22.12719547996075 56.096816209041364 10.674768336052844 16 13.258940937815641 15.64677172379461 52.52218170171859 18.57210563667116 17 13.250685430870323 16.678511164081183 30.068346645752715 40.002456759295775 18 19.74985813955686 22.36650571743588 36.834778958801536 21.048857184205723 19 28.965788880826782 21.997892359130468 28.2702872866685 20.766031473374248 20 32.0598136344173 20.565213780330907 26.663596546413103 20.71137603883868 21 20.265528931821947 27.625512301451327 30.539457593300906 21.56950117342582 22 21.889178273693926 23.772378764647932 26.925634293972635 27.412808667685507 23 16.991524180429572 30.184271866774022 25.86216585711309 26.962038095683315 24 17.894209159733617 22.13102484161611 43.62851412313337 16.346251875516902 25 14.003975573645835 24.314656160622324 40.669014347175896 21.01235391855594 26 14.068179546335028 35.27239940341529 30.02940651359498 20.630014536654702 27 15.754640365748799 37.05782684223378 30.028660534051728 17.158872257965694 28 11.942137848067839 28.848520896627626 42.49487387723862 16.714467378065915 29 12.44139709038139 23.589365116703526 42.259293537479756 21.70994425543533 30 15.179738797749529 31.68383994461848 35.348141193040114 17.788280064591884 31 27.969756994677187 27.68499173703326 26.507637089903962 17.837614178385593 32 30.494052305101654 26.599840161449865 27.568469732377356 15.337637801071127 33 27.67529400297099 28.441862581616377 25.465752327829165 18.41709108758347 34 18.273763551340053 28.09771735232962 30.50971787550994 23.11880122082039 35 19.481753091712218 26.147627362330716 31.988199598265147 22.382419947691915 36 30.75574192887433 24.53939493101927 27.87128769496797 16.833575445138425 37 19.023870848064355 32.379689662563614 31.483768231118386 17.11267125825364 38 19.425705162029246 33.008102829798794 25.465553399950963 22.100638608220994 39 19.666954946316825 31.971688584374512 28.839121554382658 19.522234914926006 40 21.990084439911097 26.708454782947307 26.391512941004457 24.90994783613714 41 16.094160521867394 24.83231623166942 28.01511255090689 31.058410695556297 42 22.821851630636683 24.48986188934736 24.839378171345533 27.848908308670424 43 22.518387152441914 26.756396401593612 25.94601395777457 24.7792024881899 44 18.573000812123063 31.679115407511215 28.414311070485613 21.3335727098801 45 15.323364725810245 40.6466846928479 22.87879473577156 21.151155845570297 46 20.96704809429579 34.69620480420772 26.212278922745863 18.124468178750625 47 21.363859479336117 28.744978936024296 27.86541932256106 22.025742262078527 48 22.850049657371596 24.006815269107147 31.419017206764146 21.724117866757112 49 20.814172019898756 24.191917659772656 32.83762163818103 22.156288682147565 50 18.72622501030695 34.60385253675317 27.615615639510853 19.054306813429026 >>END_MODULE >>Per sequence GC content fail #GC Content Count 0 1468.0 1 2458.5 2 3449.0 3 11343.0 4 19237.0 5 14425.5 6 9614.0 7 10383.0 8 11152.0 9 11210.0 10 11268.0 11 10982.5 12 10697.0 13 9747.5 14 8798.0 15 8083.0 16 7368.0 17 7024.5 18 6681.0 19 6436.0 20 6191.0 21 6869.0 22 7547.0 23 8384.5 24 9222.0 25 11698.5 26 14175.0 27 15412.5 28 16650.0 29 21332.5 30 26015.0 31 30465.0 32 34915.0 33 38161.5 34 41408.0 35 49585.5 36 57763.0 37 62814.0 38 67865.0 39 86134.0 40 104403.0 41 147630.5 42 190858.0 43 222435.0 44 254012.0 45 251580.0 46 249148.0 47 222671.0 48 196194.0 49 181399.0 50 166604.0 51 149157.5 52 131711.0 53 122242.5 54 112774.0 55 93214.5 56 73655.0 57 62881.5 58 52108.0 59 45922.5 60 39737.0 61 33355.5 62 26974.0 63 21653.0 64 16332.0 65 13310.0 66 10288.0 67 7742.0 68 5196.0 69 4543.0 70 3890.0 71 3062.0 72 2234.0 73 1862.0 74 1490.0 75 1171.5 76 853.0 77 628.5 78 404.0 79 303.5 80 203.0 81 168.5 82 134.0 83 97.0 84 60.0 85 39.5 86 19.0 87 12.5 88 6.0 89 5.5 90 5.0 91 4.0 92 3.0 93 1.5 94 0.0 95 0.5 96 1.0 97 0.5 98 0.0 99 0.0 100 0.0 >>END_MODULE >>Per base N content pass #Base N-Count 1 0.0 2 0.0 3 0.0 4 0.0 5 0.0 6 0.0 7 0.0 8 0.0 9 0.0 10 0.0 11 0.0 12 0.0 13 0.0 14 0.0 15 0.0 16 0.0 17 0.0 18 0.0 19 0.0 20 0.0 21 0.0 22 0.0 23 0.0 24 0.0 25 0.0 26 0.0 27 0.0 28 0.0 29 0.0 30 0.0 31 0.0 32 0.0 33 0.0 34 0.0 35 0.0 36 0.0 37 0.0 38 0.0 39 0.0 40 0.0 41 0.0 42 0.0 43 0.0 44 0.0 45 0.0 46 0.0 47 0.0 48 0.0 49 0.0 50 0.0 >>END_MODULE >>Sequence Length Distribution pass #Length Count 50 2010779.0 >>END_MODULE >>Sequence Duplication Levels fail #Total Deduplicated Percentage 12.874680241373806 #Duplication Level Percentage of deduplicated Percentage of total 1 80.6436366869312 10.38261035845761 2 8.500394506095548 2.1887972238302162 3 2.7546606463873 1.0639612498719773 4 1.2724231523072722 0.6552816487070805 5 0.7181144589795968 0.4622747018034729 6 0.4753271068583782 0.36718107065153627 7 0.36477933442535 0.3287492102571279 8 0.2610339175738421 0.2688582576733075 9 0.21027208153983554 0.24364672321621167 >10 2.0896191779992326 6.25334282711288 >50 0.7610529910939515 7.106289969851587 >100 1.8195020731799132 59.63796516702886 >500 0.1252810307787971 9.429997794968232 >1k 0.0031222686798454105 0.505140767479169 >5k 3.902835849806763E-4 0.5017239195543124 >10k+ 3.902835849806763E-4 0.6041791095364099 >>END_MODULE >>Overrepresented sequences warn #Sequence Count Percentage Possible Source GACCAGAAAAATGGTCCTGCCAAGCGGCTACAGTGTTCTTCTTTCAGATA 12024 0.5979772018705188 No Hit CGTTTTTTTTTTTTTTTTTTTTTTTTTTTTTTTTTTTTTTTTTTTTTTTT 9985 0.49657371595784516 No Hit >>END_MODULE >>Adapter Content pass #Position Illumina Universal Adapter Illumina Small RNA 3' Adapter Illumina Small RNA 5' Adapter Nextera Transposase Sequence SOLID Small RNA Adapter 1 0.0 0.0 0.0 0.041625658513441806 0.0 2 0.0 0.0 0.0 0.16610477829736633 0.0 3 0.0 0.0 0.0 0.22871732796095443 0.0 4 0.0 0.0 0.0 0.3255952046445681 0.0 5 0.0 0.0 0.0 0.5539644088186718 0.0 6 0.0 0.0 0.0 0.7173836607603322 0.0 7 0.0 0.0 0.0 0.8405200173664038 0.0 8 0.0 0.0 0.0 1.1111116636885505 0.0 9 0.0 0.0 0.0 1.2272855445576067 0.0 10 0.0 0.0 0.0 1.5348777762250352 0.0 11 0.0 0.0 0.0 1.7231630129417503 0.0 12 0.0 0.0 0.0 1.9463103603130927 0.0 13 0.0 0.0 0.0 2.024787408263166 0.0 14 0.0 0.0 0.0 2.0496533930382204 0.0 15 0.0 0.0 0.0 2.102070888944036 0.0 16 0.0 0.0 0.0 2.2065577569688166 0.0 17 0.0 0.0 0.0 2.33501543431675 0.0 18 0.0 0.0 0.0 2.555725915180137 0.0 19 0.0 0.0 0.0 2.6284837866319473 0.0 20 0.0 0.0 0.0 2.7084030616989736 0.0 21 0.0 0.0 0.0 2.8068226294386402 0.0 22 0.0 0.0 0.0 2.9006668559796975 0.0 23 0.0 0.0 0.0 3.016940200787854 0.0 24 0.0 0.0 0.0 3.0999428579669868 0.0 25 0.0 0.0 0.0 3.1698660071544413 0.0 26 0.0 0.0 0.0 3.2402864760373964 0.0 27 0.0 0.0 0.0 3.3095631096206994 0.0 28 0.0 0.0 0.0 3.377148856239298 0.0 29 0.0 0.0 0.0 3.454084213133318 0.0 30 0.0 0.0 0.0 3.558869472975399 0.0 31 0.0 0.0 0.0 3.660272958888073 0.0 32 0.0 4.973196955010968E-5 0.0 3.7498402360478202 0.0 33 0.0 4.973196955010968E-5 0.0 3.8311520062622497 0.0 34 0.0 4.973196955010968E-5 0.0 3.9249465008337565 0.0 35 0.0 4.973196955010968E-5 0.0 4.060565581796905 0.0 36 0.0 4.973196955010968E-5 0.0 4.162068531648679 0.0 37 0.0 4.973196955010968E-5 0.0 4.254719190920534 0.0 38 0.0 4.973196955010968E-5 0.0 4.340506838394473 0.0 >>END_MODULE >>Kmer Content fail #Sequence Count PValue Obs/Exp Max Max Obs/Exp Position TGATCGC 80 0.0 44.000004 20 CTATGCG 80 0.0 44.000004 1 AGCCGAA 80 0.0 44.000004 11 GTACCGT 20 7.85789E-4 44.000004 28 ACAGTCG 20 7.85789E-4 44.000004 1 GTCGATA 20 7.85789E-4 44.000004 1 CGAGTTT 20 7.85789E-4 44.000004 17 ACGTTCG 20 7.85789E-4 44.000004 44 CACGAAC 20 7.85789E-4 44.000004 42 AAAGTCG 20 7.85789E-4 44.000004 19 GCCGAAT 40 8.3182385E-9 44.000004 40 TCGTGCA 20 7.85789E-4 44.000004 23 CTACGTA 80 0.0 44.000004 30 CGTAGGT 40 8.3182385E-9 44.000004 18 CTACCGA 20 7.85789E-4 44.000004 37 TACTCAC 20 7.85789E-4 44.000004 30 CGTGTAC 20 7.85789E-4 44.000004 13 TTACGCG 20 7.85789E-4 44.000004 1 ACGTATA 20 7.85789E-4 44.000004 13 CGGTCTA 175 0.0 44.000004 31 >>END_MODULE